| ALL_SUBSTITUTION_DMS_IDS = [ |
| "A0A140D2T1_ZIKV_Sourisseau_2019", |
| "A0A192B1T2_9HIV1_Haddox_2018", |
| "A0A1I9GEU1_NEIME_Kennouche_2019", |
| "A0A247D711_LISMN_Stadelmann_2021", |
| "A0A2Z5U3Z0_9INFA_Doud_2016", |
| "A0A2Z5U3Z0_9INFA_Wu_2014", |
| "A4_HUMAN_Seuma_2022", |
| "A4D664_9INFA_Soh_2019", |
| "A4GRB6_PSEAI_Chen_2020", |
| "AACC1_PSEAI_Dandage_2018", |
| "ACE2_HUMAN_Chan_2020", |
| "ADRB2_HUMAN_Jones_2020", |
| "AICDA_HUMAN_Gajula_2014_3cycles", |
| "AMFR_HUMAN_Tsuboyama_2023_4G3O", |
| "AMIE_PSEAE_Wrenbeck_2017", |
| "ANCSZ_Hobbs_2022", |
| "ARGR_ECOLI_Tsuboyama_2023_1AOY", |
| "B2L11_HUMAN_Dutta_2010_binding-Mcl-1", |
| "BBC1_YEAST_Tsuboyama_2023_1TG0", |
| "BCHB_CHLTE_Tsuboyama_2023_2KRU", |
| "BLAT_ECOLX_Deng_2012", |
| "BLAT_ECOLX_Firnberg_2014", |
| "BLAT_ECOLX_Jacquier_2013", |
| "BLAT_ECOLX_Stiffler_2015", |
| "BRCA1_HUMAN_Findlay_2018", |
| "BRCA2_HUMAN_Erwood_2022_HEK293T", |
| "C6KNH7_9INFA_Lee_2018", |
| "CALM1_HUMAN_Weile_2017", |
| "CAPSD_AAV2S_Sinai_2021", |
| "CAR11_HUMAN_Meitlis_2020_gof", |
| "CAR11_HUMAN_Meitlis_2020_lof", |
| "CAS9_STRP1_Spencer_2017_positive", |
| "CASP3_HUMAN_Roychowdhury_2020", |
| "CASP7_HUMAN_Roychowdhury_2020", |
| "CATR_CHLRE_Tsuboyama_2023_2AMI", |
| "CBPA2_HUMAN_Tsuboyama_2023_1O6X", |
| "CBS_HUMAN_Sun_2020", |
| "CBX4_HUMAN_Tsuboyama_2023_2K28", |
| "CCDB_ECOLI_Adkar_2012", |
| "CCDB_ECOLI_Tripathi_2016", |
| "CCR5_HUMAN_Gill_2023", |
| "CD19_HUMAN_Klesmith_2019_FMC_singles", |
| "CP2C9_HUMAN_Amorosi_2021_abundance", |
| "CP2C9_HUMAN_Amorosi_2021_activity", |
| "CSN4_MOUSE_Tsuboyama_2023_1UFM", |
| "CUE1_YEAST_Tsuboyama_2023_2MYX", |
| "D7PM05_CLYGR_Somermeyer_2022", |
| "DLG4_HUMAN_Faure_2021", |
| "DLG4_RAT_McLaughlin_2012", |
| "DN7A_SACS2_Tsuboyama_2023_1JIC", |
| "DNJA1_HUMAN_Tsuboyama_2023_2LO1", |
| "DOCK1_MOUSE_Tsuboyama_2023_2M0Y", |
| "DYR_ECOLI_Nguyen_2023", |
| "DYR_ECOLI_Thompson_2019", |
| "ENV_HV1B9_DuenasDecamp_2016", |
| "ENV_HV1BR_Haddox_2016", |
| "ENVZ_ECOLI_Ghose_2023", |
| "EPHB2_HUMAN_Tsuboyama_2023_1F0M", |
| "ERBB2_HUMAN_Elazar_2016", |
| "ESTA_BACSU_Nutschel_2020", |
| "F7YBW8_MESOW_Ding_2023", |
| "F7YBW8_MESOW_Aakre_2015", |
| "FECA_ECOLI_Tsuboyama_2023_2D1U", |
| "FKBP3_HUMAN_Tsuboyama_2023_2KFV", |
| "GAL4_YEAST_Kitzman_2015", |
| "GCN4_YEAST_Staller_2018", |
| "GDIA_HUMAN_Silverstein_2021", |
| "GFP_AEQVI_Sarkisyan_2016", |
| "GLPA_HUMAN_Elazar_2016", |
| "GRB2_HUMAN_Faure_2021", |
| "HCP_LAMBD_Tsuboyama_2023_2L6Q", |
| "HECD1_HUMAN_Tsuboyama_2023_3DKM", |
| "HEM3_HUMAN_Loggerenberg_2023", |
| "HIS7_YEAST_Pokusaeva_2019", |
| "HMDH_HUMAN_Jiang_2019", |
| "HSP82_YEAST_Cote-Hammarlof_2020_growth-H2O2", |
| "HSP82_YEAST_Flynn_2019", |
| "HSP82_YEAST_Mishra_2016", |
| "HXK4_HUMAN_Gersing_2022_activity", |
| "HXK4_HUMAN_Gersing_2023_abundance", |
| "I6TAH8_I68A0_Doud_2015", |
| "IF1_ECOLI_Kelsic_2016", |
| "ILF3_HUMAN_Tsuboyama_2023_2L33", |
| "ISDH_STAAW_Tsuboyama_2023_2LHR", |
| "KCNE1_HUMAN_Muhammad_2023_expression", |
| "KCNE1_HUMAN_Muhammad_2023_function", |
| "KCNH2_HUMAN_Kozek_2020", |
| "KCNJ2_MOUSE_Coyote-Maestas_2022_function", |
| "KCNJ2_MOUSE_Coyote-Maestas_2022_surface", |
| "KKA2_KLEPN_Melnikov_2014", |
| "LGK_LIPST_Klesmith_2015", |
| "LYAM1_HUMAN_Elazar_2016", |
| "MAFG_MOUSE_Tsuboyama_2023_1K1V", |
| "MBD11_ARATH_Tsuboyama_2023_6ACV", |
| "MET_HUMAN_Estevam_2023", |
| "MK01_HUMAN_Brenan_2016", |
| "MLAC_ECOLI_MacRae_2023", |
| "MSH2_HUMAN_Jia_2020", |
| "MTH3_HAEAE_RockahShmuel_2015", |
| "MTHR_HUMAN_Weile_2021", |
| "MYO3_YEAST_Tsuboyama_2023_2BTT", |
| "NCAP_I34A1_Doud_2015", |
| "NKX31_HUMAN_Tsuboyama_2023_2L9R", |
| "NPC1_HUMAN_Erwood_2022_HEK293T", |
| "NPC1_HUMAN_Erwood_2022_RPE1", |
| "NRAM_I33A0_Jiang_2016", |
| "NUD15_HUMAN_Suiter_2020", |
| "NUSA_ECOLI_Tsuboyama_2023_1WCL", |
| "NUSG_MYCTU_Tsuboyama_2023_2MI6", |
| "OBSCN_HUMAN_Tsuboyama_2023_1V1C", |
| "ODP2_GEOSE_Tsuboyama_2023_1W4G", |
| "OPSD_HUMAN_Wan_2019", |
| "OTC_HUMAN_Lo_2023", |
| "OTU7A_HUMAN_Tsuboyama_2023_2L2D", |
| "OXDA_RHOTO_Vanella_2023_activity", |
| "OXDA_RHOTO_Vanella_2023_expression", |
| "P53_HUMAN_Giacomelli_2018_Null_Etoposide", |
| "P53_HUMAN_Giacomelli_2018_Null_Nutlin", |
| "P53_HUMAN_Giacomelli_2018_WT_Nutlin", |
| "P53_HUMAN_Kotler_2018", |
| "P84126_THETH_Chan_2017", |
| "PA_I34A1_Wu_2015", |
| "PABP_YEAST_Melamed_2013", |
| "PAI1_HUMAN_Huttinger_2021", |
| "PHOT_CHLRE_Chen_2023", |
| "PIN1_HUMAN_Tsuboyama_2023_1I6C", |
| "PITX2_HUMAN_Tsuboyama_2023_2L7M", |
| "PKN1_HUMAN_Tsuboyama_2023_1URF", |
| "POLG_CXB3N_Mattenberger_2021", |
| "POLG_DEN26_Suphatrakul_2023", |
| "POLG_HCVJF_Qi_2014", |
| "POLG_PESV_Tsuboyama_2023_2MXD", |
| "PPARG_HUMAN_Majithia_2016", |
| "PPM1D_HUMAN_Miller_2022", |
| "PR40A_HUMAN_Tsuboyama_2023_1UZC", |
| "PRKN_HUMAN_Clausen_2023", |
| "PSAE_PICP2_Tsuboyama_2023_1PSE", |
| "PTEN_HUMAN_Matreyek_2021", |
| "PTEN_HUMAN_Mighell_2018", |
| "Q2N0S5_9HIV1_Haddox_2018", |
| "Q53Z42_HUMAN_McShan_2019_binding-TAPBPR", |
| "Q53Z42_HUMAN_McShan_2019_expression", |
| "Q59976_STRSQ_Romero_2015", |
| "Q6WV12_9MAXI_Somermeyer_2022", |
| "Q837P4_ENTFA_Meier_2023", |
| "Q837P5_ENTFA_Meier_2023", |
| "Q8WTC7_9CNID_Somermeyer_2022", |
| "R1AB_SARS2_Flynn_2022", |
| "RAD_ANTMA_Tsuboyama_2023_2CJJ", |
| "RAF1_HUMAN_Zinkus-Boltz_2019", |
| "RASH_HUMAN_Bandaru_2017", |
| "RASK_HUMAN_Weng_2022_abundance", |
| "RASK_HUMAN_Weng_2022_binding-DARPin_K55", |
| "RBP1_HUMAN_Tsuboyama_2023_2KWH", |
| "RCD1_ARATH_Tsuboyama_2023_5OAO", |
| "RCRO_LAMBD_Tsuboyama_2023_1ORC", |
| "RD23A_HUMAN_Tsuboyama_2023_1IFY", |
| "RDRP_I33A0_Li_2023", |
| "REV_HV1H2_Fernandes_2016", |
| "RFAH_ECOLI_Tsuboyama_2023_2LCL", |
| "RL20_AQUAE_Tsuboyama_2023_1GYZ", |
| "RL40A_YEAST_Mavor_2016", |
| "RL40A_YEAST_Roscoe_2013", |
| "RL40A_YEAST_Roscoe_2014", |
| "RNC_ECOLI_Weeks_2023", |
| "RPC1_BP434_Tsuboyama_2023_1R69", |
| "RPC1_LAMBD_Li_2019_high-expression", |
| "RPC1_LAMBD_Li_2019_low-expression", |
| "RS15_GEOSE_Tsuboyama_2023_1A32", |
| "S22A1_HUMAN_Yee_2023_abundance", |
| "S22A1_HUMAN_Yee_2023_activity", |
| "SAV1_MOUSE_Tsuboyama_2023_2YSB", |
| "SBI_STAAM_Tsuboyama_2023_2JVG", |
| "SC6A4_HUMAN_Young_2021", |
| "SCIN_STAAR_Tsuboyama_2023_2QFF", |
| "SCN5A_HUMAN_Glazer_2019", |
| "SDA_BACSU_Tsuboyama_2023_1PV0", |
| "SERC_HUMAN_Xie_2023", |
| "SHOC2_HUMAN_Kwon_2022", |
| "SOX30_HUMAN_Tsuboyama_2023_7JJK", |
| "SPA_STAAU_Tsuboyama_2023_1LP1", |
| "SPG1_STRSG_Olson_2014", |
| "SPG1_STRSG_Wu_2016", |
| "SPG2_STRSG_Tsuboyama_2023_5UBS", |
| "SPIKE_SARS2_Starr_2020_binding", |
| "SPIKE_SARS2_Starr_2020_expression", |
| "SPTN1_CHICK_Tsuboyama_2023_1TUD", |
| "SQSTM_MOUSE_Tsuboyama_2023_2RRU", |
| "SR43C_ARATH_Tsuboyama_2023_2N88", |
| "SRBS1_HUMAN_Tsuboyama_2023_2O2W", |
| "SRC_HUMAN_Ahler_2019", |
| "SRC_HUMAN_Chakraborty_2023_binding-DAS_25uM", |
| "SRC_HUMAN_Nguyen_2022", |
| "SUMO1_HUMAN_Weile_2017", |
| "SYUA_HUMAN_Newberry_2020", |
| "TADBP_HUMAN_Bolognesi_2019", |
| "TAT_HV1BR_Fernandes_2016", |
| "TCRG1_MOUSE_Tsuboyama_2023_1E0L", |
| "THO1_YEAST_Tsuboyama_2023_2WQG", |
| "TNKS2_HUMAN_Tsuboyama_2023_5JRT", |
| "TPK1_HUMAN_Weile_2017", |
| "TPMT_HUMAN_Matreyek_2018", |
| "TPOR_HUMAN_Bridgford_2020", |
| "TRPC_SACS2_Chan_2017", |
| "TRPC_THEMA_Chan_2017", |
| "UBC9_HUMAN_Weile_2017", |
| "UBE4B_HUMAN_Tsuboyama_2023_3L1X", |
| "UBE4B_MOUSE_Starita_2013", |
| "UBR5_HUMAN_Tsuboyama_2023_1I2T", |
| "VG08_BPP22_Tsuboyama_2023_2GP8", |
| "VILI_CHICK_Tsuboyama_2023_1YU5", |
| "VKOR1_HUMAN_Chiasson_2020_abundance", |
| "VKOR1_HUMAN_Chiasson_2020_activity", |
| "VRPI_BPT7_Tsuboyama_2023_2WNM", |
| "YAIA_ECOLI_Tsuboyama_2023_2KVT", |
| "YAP1_HUMAN_Araya_2012", |
| "YNZC_BACSU_Tsuboyama_2023_2JVD", |
| ] |
|
|
| ALL_INDEL_DMS_IDS = [ |
| "A4_HUMAN_Seuma_2022_indels", |
| "AMFR_HUMAN_Tsuboyama_2023_4G3O_indels", |
| "ARGR_ECOLI_Tsuboyama_2023_1AOY_indels", |
| "B1LPA6_ECOSM_Russ_2020_indels", |
| "BBC1_YEAST_Tsuboyama_2023_1TG0_indels", |
| "BCHB_CHLTE_Tsuboyama_2023_2KRU_indels", |
| "BLAT_ECOLX_Gonzalez_2019_indels", |
| "CAPSD_AAV2S_Sinai_2021_designed_indels", |
| "CAPSD_AAV2S_Sinai_2021_library_indels", |
| "CATR_CHLRE_Tsuboyama_2023_2AMI_indels", |
| "CBPA2_HUMAN_Tsuboyama_2023_1O6X_indels", |
| "CBX4_HUMAN_Tsuboyama_2023_2K28_indels", |
| "CSN4_MOUSE_Tsuboyama_2023_1UFM_indels", |
| "CUE1_YEAST_Tsuboyama_2023_2MYX_indels", |
| "DN7A_SACS2_Tsuboyama_2023_1JIC_indels", |
| "DNJA1_HUMAN_Tsuboyama_2023_2LO1_indels", |
| "DOCK1_MOUSE_Tsuboyama_2023_2M0Y_indels", |
| "EPHB2_HUMAN_Tsuboyama_2023_1F0M_indels", |
| "FECA_ECOLI_Tsuboyama_2023_2D1U_indels", |
| "HCP_LAMBD_Tsuboyama_2023_2L6Q_indels", |
| "HECD1_HUMAN_Tsuboyama_2023_3DKM_indels", |
| "HIS7_YEAST_Pokusaeva_2019_indels", |
| "ILF3_HUMAN_Tsuboyama_2023_2L33_indels", |
| "KCNJ2_MOUSE_Macdonald_2022_indels", |
| "MAFG_MOUSE_Tsuboyama_2023_1K1V_indels", |
| "MBD11_ARATH_Tsuboyama_2023_6ACV_indels", |
| "MYO3_YEAST_Tsuboyama_2023_2BTT_indels", |
| "NKX31_HUMAN_Tsuboyama_2023_2L9R_indels", |
| "NUSA_ECOLI_Tsuboyama_2023_1WCL_indels", |
| "NUSG_MYCTU_Tsuboyama_2023_2MI6_indels", |
| "OBSCN_HUMAN_Tsuboyama_2023_1V1C_indels", |
| "ODP2_GEOSE_Tsuboyama_2023_1W4G_indels", |
| "OTU7A_HUMAN_Tsuboyama_2023_2L2D_indels", |
| "P53_HUMAN_Kotler_2018_indels", |
| "PIN1_HUMAN_Tsuboyama_2023_1I6C_indels", |
| "PITX2_HUMAN_Tsuboyama_2023_2L7M_indels", |
| "PKN1_HUMAN_Tsuboyama_2023_1URF_indels", |
| "POLG_PESV_Tsuboyama_2023_2MXD_indels", |
| "PR40A_HUMAN_Tsuboyama_2023_1UZC_indels", |
| "PSAE_PICP2_Tsuboyama_2023_1PSE_indels", |
| "PTEN_HUMAN_Mighell_2018_indels", |
| "Q8EG35_SHEON_Campbell_2022_indels", |
| "RAD_ANTMA_Tsuboyama_2023_2CJJ_indels", |
| "RCD1_ARATH_Tsuboyama_2023_5OAO_indels", |
| "RD23A_HUMAN_Tsuboyama_2023_1IFY_indels", |
| "RPC1_BP434_Tsuboyama_2023_1R69_indels", |
| "RS15_GEOSE_Tsuboyama_2023_1A32_indels", |
| "S22A1_HUMAN_Yee_2023_abundance_indels", |
| "S22A1_HUMAN_Yee_2023_activity_indels", |
| "SAV1_MOUSE_Tsuboyama_2023_2YSB_indels", |
| "SDA_BACSU_Tsuboyama_2023_1PV0_indels", |
| "SOX30_HUMAN_Tsuboyama_2023_7JJK_indels", |
| "SPG2_STRSG_Tsuboyama_2023_5UBS_indels", |
| "SPTN1_CHICK_Tsuboyama_2023_1TUD_indels", |
| "SQSTM_MOUSE_Tsuboyama_2023_2RRU_indels", |
| "SR43C_ARATH_Tsuboyama_2023_2N88_indels", |
| "SRBS1_HUMAN_Tsuboyama_2023_2O2W_indels", |
| "TCRG1_MOUSE_Tsuboyama_2023_1E0L_indels", |
| "THO1_YEAST_Tsuboyama_2023_2WQG_indels", |
| "TNKS2_HUMAN_Tsuboyama_2023_5JRT_indels", |
| "UBE4B_HUMAN_Tsuboyama_2023_3L1X_indels", |
| "UBR5_HUMAN_Tsuboyama_2023_1I2T_indels", |
| "VG08_BPP22_Tsuboyama_2023_2GP8_indels", |
| "VILI_CHICK_Tsuboyama_2023_1YU5_indels", |
| "VRPI_BPT7_Tsuboyama_2023_2WNM_indels", |
| "YNZC_BACSU_Tsuboyama_2023_2JVD_indels" |
| ] |
