Add graph-ml pipeline tag and paper link (#1)
Browse files- Add graph-ml pipeline tag and paper link (2806b13ad949918012d57e8724fef8684429d273)
Co-authored-by: Niels Rogge <nielsr@users.noreply.huggingface.co>
README.md
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license: apache-2.0
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tags:
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- graph-neural-networks
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- histopathology
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- self-supervised-learning
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- pytorch-geometric
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- graph-representation-learning
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datasets:
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library_name: pytorch
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---
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# GrapHist: Graph Self-Supervised Learning for Histopathology
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This repository contains the pre-trained model from
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<p align="center">
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<img src="graphist.png" alt="GrapHist architecture" width="100%">
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## Requirements
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```
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torch
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torch-geometric
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huggingface_hub
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```
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The model expects graphs in PyTorch Geometric format with `x`, `edge_index`, `edge_attr`, and `batch`.
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datasets:
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- ogutsevda/graph-tcga-brca
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library_name: pytorch
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license: apache-2.0
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pipeline_tag: graph-ml
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tags:
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- graph-neural-networks
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- histopathology
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- self-supervised-learning
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- pytorch-geometric
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- graph-representation-learning
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# GrapHist: Graph Self-Supervised Learning for Histopathology
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This repository contains the pre-trained model from the paper [GrapHist: Graph Self-Supervised Learning for Histopathology](https://huggingface.co/papers/2603.00143).
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Pre-trained on the [graph-tcga-brca](https://huggingface.co/datasets/ogutsevda/graph-tcga-brca) dataset, it employs an **ACM-GIN** (Adaptive Channel Mixing Graph Isomorphism Network) encoder-decoder architecture with a masked node attribute prediction objective.
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- **Paper:** [arXiv:2603.00143](https://arxiv.org/abs/2603.00143)
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- **Code:** [GitHub Repository](https://github.com/ogutsevda/graphist)
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<p align="center">
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<img src="graphist.png" alt="GrapHist architecture" width="100%">
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## Requirements
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```bash
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pip install torch torch-geometric huggingface_hub
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```
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The model expects graphs in PyTorch Geometric format with `x`, `edge_index`, `edge_attr`, and `batch`.
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