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omshrivastava
/
omnibimol-variant-priority

Scikit-learn
English
variant-prioritization
pathogenicity-prediction
clinvar
genomics
bioinformatics
lightweight
cpu-friendly
xgboost
random-forest
Model card Files Files and versions
xet
Community

Instructions to use omshrivastava/omnibimol-variant-priority with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

  • Libraries
  • Scikit-learn

    How to use omshrivastava/omnibimol-variant-priority with Scikit-learn:

    from huggingface_hub import hf_hub_download
    import joblib
    model = joblib.load(
    	hf_hub_download("omshrivastava/omnibimol-variant-priority", "sklearn_model.joblib")
    )
    # only load pickle files from sources you trust
    # read more about it here https://skops.readthedocs.io/en/stable/persistence.html
  • Notebooks
  • Google Colab
  • Kaggle
omnibimol-variant-priority
23.9 MB
Ctrl+K
Ctrl+K
  • 1 contributor
History: 23 commits
omshrivastava's picture
omshrivastava
Upload notebook.ipynb
519a258 verified 3 months ago
  • plots
    Upload plots/precision_at_k.png with huggingface_hub 3 months ago
  • .gitattributes
    1.52 kB
    initial commit 3 months ago
  • README.md
    6.77 kB
    Upload README.md 3 months ago
  • app.py
    5.16 kB
    Upload app.py 3 months ago
  • extended_metrics.json
    1.39 kB
    Upload extended_metrics.json with huggingface_hub 3 months ago
  • gene_disease_evidence.csv
    3.46 MB
    Upload gene_disease_evidence.csv with huggingface_hub 3 months ago
  • inference.py
    4.06 kB
    Upload inference.py 3 months ago
  • lr_protein.pkl
    865 Bytes
    xet
    Upload lr_protein.pkl with huggingface_hub 3 months ago
  • metrics_summary.json
    2.73 kB
    Upload metrics_summary.json 3 months ago
  • notebook.ipynb
    8.66 kB
    Upload notebook.ipynb 3 months ago
  • research_memo.md
    11.9 kB
    Upload research_memo.md 3 months ago
  • rf_protein.pkl
    19.6 MB
    xet
    Upload rf_protein.pkl with huggingface_hub 3 months ago
  • rf_protein_imp.pkl
    1.06 kB
    xet
    Upload rf_protein_imp.pkl with huggingface_hub 3 months ago
  • rf_protein_scaler.pkl
    896 Bytes
    xet
    Upload rf_protein_scaler.pkl with huggingface_hub 3 months ago
  • xgb_precomputed.json
    400 kB
    Upload xgb_precomputed.json with huggingface_hub 3 months ago
  • xgb_precomputed_imp.pkl
    648 Bytes
    xet
    Upload xgb_precomputed_imp.pkl with huggingface_hub 3 months ago
  • xgb_precomputed_scaler.pkl
    608 Bytes
    xet
    Upload xgb_precomputed_scaler.pkl with huggingface_hub 3 months ago