| | --- |
| | tags: |
| | - genomics |
| | - ffpe |
| | - wgs |
| | - artifact |
| | - classifier |
| | --- |
| | # 🧽 nf-ffperase |
| |
|
| | > [!important] |
| | > **You may use FFPErase, the underlying content, and any output therefrom for personal use, academic research and noncommercial purposes only. See [LICENSE](LICENSE) for more details.** |
| |
|
| | Trained Models for [`FFERASE`](https://github.com/papaemmelab/nf-ffperase), a tool for pre-processing and classifying FFPE artifact mutations, using nextflow. |
| |
|
| | ## Docs: |
| |
|
| | <https://github.com/papaemmelab/nf-ffperase> |
| |
|
| | ## Models |
| |
|
| | Use those for the `--model` param, and use `--modelName ARTIFACT`. |
| |
|
| | ```bash |
| | https://huggingface.co/papaemmelab/ffperase/ |
| | ├── model.indels.pkl |
| | └── model.svns.pkl |
| | ``` |
