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Mar 3

APEX: An Extensible and Dynamism-Aware Simulator for Automated Parallel Execution in LLM Serving

Efficiently serving Large Language Models (LLMs) requires selecting an optimal parallel execution plan, balancing computation, memory, and communication overhead. However, determining the best strategy is challenging due to varying parallelism techniques (data, pipeline, tensor) and workload characteristics (e.g., compute-intensive tasks with long prompts vs. memory-intensive tasks with long generation). We propose APEX, an LLM serving system simulator that efficiently identifies optimal parallel execution plans by considering key factors of LLM serving systems, such as memory usage, batching behavior, etc. APEX performs dynamism-aware simulation to model iteration-level batching, and leverages LLMs' repetitive structure to reduce design space, scaling efficiently to trillion-scale models. APEX abstracts the key components of LLM serving systems, including the model, batching module, quantization formats, and device clusters, enabling the simulator to be general and extensible. Simulating on a CPU, APEX evaluates execution plans for various device clusters, covering diverse LLMs and workloads. APEX finds plans up to 3.37x faster than heuristics, and also plans that reduce energy consumption by up to 45% compared to latency-optimal plans. APEX performs comprehensive evaluations, reporting key system metrics like time per output token and time to first token, which can help service providers meet SLOs. APEX identifies an optimal plan within 15 minutes on a CPU, making it 71x faster and 1234x more cost-effective than cloud-based GPU deployment. APEX can be accessed at https://github.com/microsoft/apex_plus

  • 4 authors
·
Nov 26, 2024

Predicting and generating antibiotics against future pathogens with ApexOracle

Antimicrobial resistance (AMR) is escalating and outpacing current antibiotic development. Thus, discovering antibiotics effective against emerging pathogens is becoming increasingly critical. However, existing approaches cannot rapidly identify effective molecules against novel pathogens or emerging drug-resistant strains. Here, we introduce ApexOracle, an artificial intelligence (AI) model that both predicts the antibacterial potency of existing compounds and designs de novo molecules active against strains it has never encountered. Departing from models that rely solely on molecular features, ApexOracle incorporates pathogen-specific context through the integration of molecular features captured via a foundational discrete diffusion language model and a dual-embedding framework that combines genomic- and literature-derived strain representations. Across diverse bacterial species and chemical modalities, ApexOracle consistently outperformed state-of-the-art approaches in activity prediction and demonstrated reliable transferability to novel pathogens with little or no antimicrobial data. Its unified representation-generation architecture further enables the in silico creation of "new-to-nature" molecules with high predicted efficacy against priority threats. By pairing rapid activity prediction with targeted molecular generation, ApexOracle offers a scalable strategy for countering AMR and preparing for future infectious-disease outbreaks.

  • 4 authors
·
Jul 10, 2025

ZK-APEX: Zero-Knowledge Approximate Personalized Unlearning with Executable Proofs

Machine unlearning aims to remove the influence of specific data points from a trained model to satisfy privacy, copyright, and safety requirements. In real deployments, providers distribute a global model to many edge devices, where each client personalizes the model using private data. When a deletion request is issued, clients may ignore it or falsely claim compliance, and providers cannot check their parameters or data. This makes verification difficult, especially because personalized models must forget the targeted samples while preserving local utility, and verification must remain lightweight on edge devices. We introduce ZK APEX, a zero-shot personalized unlearning method that operates directly on the personalized model without retraining. ZK APEX combines sparse masking on the provider side with a small Group OBS compensation step on the client side, using a blockwise empirical Fisher matrix to create a curvature-aware update designed for low overhead. Paired with Halo2 zero-knowledge proofs, it enables the provider to verify that the correct unlearning transformation was applied without revealing any private data or personalized parameters. On Vision Transformer classification tasks, ZK APEX recovers nearly all personalization accuracy while effectively removing the targeted information. Applied to the OPT125M generative model trained on code data, it recovers around seventy percent of the original accuracy. Proof generation for the ViT case completes in about two hours, more than ten million times faster than retraining-based checks, with less than one gigabyte of memory use and proof sizes around four hundred megabytes. These results show the first practical framework for verifiable personalized unlearning on edge devices.

  • 4 authors
·
Dec 9, 2025