Daily Papers

Manufacturable chip layouts must satisfy thousands of geometry-based design rules, and design rule checking (DRC) enforces them by running executable DRC scripts on layouts. Translating natural language rules into correct DRC scripts is labor-intensive and requires specialized expertise, motivating LLM agents for DRC script synthesis and debugging. However, existing benchmarks have small evaluation sets and often evaluate scripts by code similarity rather than execution correctness, and prior machine learning-based methods either ignore execution feedback or require labeled test layouts as agent's input. To this end, we introduce Rule2DRC, a large-scale benchmark for DRC script coding agents with 1,000 rule-to-script tasks and 13,921 evaluation chip layouts for execution-based scoring. Rule2DRC provides an evaluation pipeline that measures functional correctness via DRC execution outcomes without requiring evaluation layouts as input to the agent. We also propose SplitTester, a tester agent for program selection that uses execution feedback to generate discriminative test cases and separate previously indistinguishable candidate scripts, substantially improving Best-of-N selection performance in this domain. We release the code at https://github.com/snu-mllab/Rule2DRC.

In this paper we describe our efforts to make a bidirectional Congolese Swahili (SWC) to French (FRA) neural machine translation system with the motivation of improving humanitarian translation workflows. For training, we created a 25,302-sentence general domain parallel corpus and combined it with publicly available data. Experimenting with low-resource methodologies like cross-dialect transfer and semi-supervised learning, we recorded improvements of up to 2.4 and 3.5 BLEU points in the SWC-FRA and FRA-SWC directions, respectively. We performed human evaluations to assess the usability of our models in a COVID-domain chatbot that operates in the Democratic Republic of Congo (DRC). Direct assessment in the SWC-FRA direction demonstrated an average quality ranking of 6.3 out of 10 with 75% of the target strings conveying the main message of the source text. For the FRA-SWC direction, our preliminary tests on post-editing assessment showed its potential usefulness for machine-assisted translation. We make our models, datasets containing up to 1 million sentences, our development pipeline, and a translator web-app available for public use.

Ethiopic/Amharic script is one of the oldest African writing systems, which serves at least 23 languages (e.g., Amharic, Tigrinya) in East Africa for more than 120 million people. The Amharic writing system, Abugida, has 282 syllables, 15 punctuation marks, and 20 numerals. The Amharic syllabic matrix is derived from 34 base graphemes/consonants by adding up to 12 appropriate diacritics or vocalic markers to the characters. The syllables with a common consonant or vocalic markers are likely to be visually similar and challenge text recognition tasks. In this work, we presented the first comprehensive public datasets named HUST-ART, HUST-AST, ABE, and Tana for Amharic script detection and recognition in the natural scene. We have also conducted extensive experiments to evaluate the performance of the state of art methods in detecting and recognizing Amharic scene text on our datasets. The evaluation results demonstrate the robustness of our datasets for benchmarking and its potential of promoting the development of robust Amharic script detection and recognition algorithms. Consequently, the outcome will benefit people in East Africa, including diplomats from several countries and international communities.

We present GlotScript, an open resource and tool for low resource writing system identification. GlotScript-R is a resource that provides the attested writing systems for more than 7,000 languages. It is compiled by aggregating information from existing writing system resources. GlotScript-T is a writing system identification tool that covers all 161 Unicode 15.0 scripts. For an input text, it returns its script distribution where scripts are identified by ISO 15924 codes. We also present two use cases for GlotScript. First, we demonstrate that GlotScript supports cleaning multilingual corpora such as mC4 and OSCAR. Second, we analyze the tokenization of a number of language models such as GPT-4 using GlotScript and provide insights on the coverage of low resource scripts and languages by each language model. We hope that GlotScript will become a useful resource for work on low resource languages in the NLP community. GlotScript-R and GlotScript-T are available at https://github.com/cisnlp/GlotScript.

In this paper, we introduce DRR-RATE, a large-scale synthetic chest X-ray dataset derived from the recently released CT-RATE dataset. DRR-RATE comprises of 50,188 frontal Digitally Reconstructed Radiographs (DRRs) from 21,304 unique patients. Each image is paired with a corresponding radiology text report and binary labels for 18 pathology classes. Given the controllable nature of DRR generation, it facilitates the inclusion of lateral view images and images from any desired viewing position. This opens up avenues for research into new and novel multimodal applications involving paired CT, X-ray images from various views, text, and binary labels. We demonstrate the applicability of DRR-RATE alongside existing large-scale chest X-ray resources, notably the CheXpert dataset and CheXnet model. Experiments demonstrate that CheXnet, when trained and tested on the DRR-RATE dataset, achieves sufficient to high AUC scores for the six common pathologies cited in common literature: Atelectasis, Cardiomegaly, Consolidation, Lung Lesion, Lung Opacity, and Pleural Effusion. Additionally, CheXnet trained on the CheXpert dataset can accurately identify several pathologies, even when operating out of distribution. This confirms that the generated DRR images effectively capture the essential pathology features from CT images. The dataset and labels are publicly accessible at https://huggingface.co/datasets/farrell236/DRR-RATE.

Medical research generates a large number of publications with the PubMed database already containing >35 million research articles. Integration of the knowledge scattered across this large body of literature could provide key insights into physiological mechanisms and disease processes leading to novel medical interventions. However, it is a great challenge for researchers to utilize this information in full since the scale and complexity of the data greatly surpasses human processing abilities. This becomes especially problematic in cases of extreme urgency like the COVID-19 pandemic. Automated text mining can help extract and connect information from the large body of medical research articles. The first step in text mining is typically the identification of specific classes of keywords (e.g., all protein or disease names), so called Named Entity Recognition (NER). Here we present an end-to-end pipeline for NER of typical entities found in medical research articles, including diseases, cells, chemicals, genes/proteins, and species. The pipeline can access and process large medical research article collections (PubMed, CORD-19) or raw text and incorporates a series of deep learning models fine-tuned on the HUNER corpora collection. In addition, the pipeline can perform dictionary-based NER related to COVID-19 and other medical topics. Users can also load their own NER models and dictionaries to include additional entities. The output consists of publication-ready ranked lists and graphs of detected entities and files containing the annotated texts. An associated script allows rapid inspection of the results for specific entities of interest. As model use cases, the pipeline was deployed on two collections of autophagy-related abstracts from PubMed and on the CORD19 dataset, a collection of 764 398 research article abstracts related to COVID-19.

Transformer-based OCR models have shown strong performance on Latin and CJK scripts, but their application to African syllabic writing systems remains limited. We present the first adaptation of TrOCR for printed Tigrinya using the Ge'ez script. Starting from a pre-trained model, we extend the byte-level BPE tokenizer to cover 230 Ge'ez characters and introduce Word-Aware Loss Weighting to resolve systematic word-boundary failures that arise when applying Latin-centric BPE conventions to a new script. The unmodified model produces no usable output on Ge'ez text. After adaptation, the TrOCR-Printed variant achieves 0.22% Character Error Rate and 97.20% exact match accuracy on a held-out test set of 5,000 synthetic images from the GLOCR dataset. An ablation study confirms that Word-Aware Loss Weighting is the critical component, reducing CER by two orders of magnitude compared to vocabulary extension alone. The full pipeline trains in under three hours on a single 8 GB consumer GPU. All code, model weights, and evaluation scripts are publicly released.

Manual assignment of Anatomical Therapeutic Chemical (ATC) codes to prescription records is a significant bottleneck in healthcare research and operations at Ontario Health and InterRAI Canada, requiring extensive expert time and effort. To automate this process while maintaining data privacy, we develop a practical approach using locally deployable large language models (LLMs). Inspired by recent advances in automatic International Classification of Diseases (ICD) coding, our method frames ATC coding as a hierarchical information extraction task, guiding LLMs through the ATC ontology level by level. We evaluate our approach using GPT-4o as an accuracy ceiling and focus development on open-source Llama models suitable for privacy-sensitive deployment. Testing across Health Canada drug product data, the RABBITS benchmark, and real clinical notes from Ontario Health, our method achieves 78% exact match accuracy with GPT-4o and 60% with Llama 3.1 70B. We investigate knowledge grounding through drug definitions, finding modest improvements in accuracy. Further, we show that fine-tuned Llama 3.1 8B matches zero-shot Llama 3.1 70B accuracy, suggesting that effective ATC coding is feasible with smaller models. Our results demonstrate the feasibility of automatic ATC coding in privacy-sensitive healthcare environments, providing a foundation for future deployments.

This paper presents a comprehensive study on resume classification to reduce the time and labor needed to screen an overwhelming number of applications significantly, while improving the selection of suitable candidates. A total of 6,492 resumes are extracted from 24,933 job applications for 252 positions designated into four levels of experience for Clinical Research Coordinators (CRC). Each resume is manually annotated to its most appropriate CRC position by experts through several rounds of triple annotation to establish guidelines. As a result, a high Kappa score of 61% is achieved for inter-annotator agreement. Given this dataset, novel transformer-based classification models are developed for two tasks: the first task takes a resume and classifies it to a CRC level (T1), and the second task takes both a resume and a job description to apply and predicts if the application is suited to the job T2. Our best models using section encoding and multi-head attention decoding give results of 73.3% to T1 and 79.2% to T2. Our analysis shows that the prediction errors are mostly made among adjacent CRC levels, which are hard for even experts to distinguish, implying the practical value of our models in real HR platforms.