Daily Papers

Recent years have witnessed great advances in the reasoning ability of Large Language Models (LLMs). However, the reasoning processes of LLMs often exhibit uncertainty, where LLMs often produce a proliferation of divergent branches at each reasoning step even when fed the same prompting inputs, and certain branches exhibit evidently incredible, even nonsensical, reasoning chains and results. In this paper, we propose the Graph-complexity-based UncerTainty (GUT) method for investigating the reasoning uncertainty of LLMs. The key idea of GUT is to characterize the potential branches of each reasoning chain with a directed acyclic graph, thereby ensuring that all potential branches are comprehensively covered within the graph space. Building upon this recognition, we further build two modules of GUT, that is, a Quantification (GUT-Q) module and an Optimization (GUT-O) module, for quantifying and reducing the reasoning uncertainty of LLMs, respectively. GUT-Q measures LLM reasoning uncertainty by approximating the reasoning space complexity with graph complexity. GUT-O implements uncertainty optimization by treating negative uncertainty as the reward function in reinforcement learning. Experimental results conducted on four LLMs and five datasets validate the effectiveness of GUT.

We propose a quark flavor model based on modular S'_4 with a general CP symmetry. CP violation in the quark sector is entirely realized by the modulus langle τrangle. We show that the canonical normalization induced by the Kähler metric plays a crucial role in reproducing the observed hierarchies, while maintaining coupling constants of order O(1). The minimal model achieves a great fit to the quark sector data, which we take as the PDG 2024 data extrapolated to the GUT scale.

The abundance of intestinal flora is closely related to human diseases, but diseases are not caused by a single gut microbe. Instead, they result from the complex interplay of numerous microbial entities. This intricate and implicit connection among gut microbes poses a significant challenge for disease prediction using abundance information from OTU data. Recently, several methods have shown potential in predicting corresponding diseases. However, these methods fail to learn the inner association among gut microbes from different hosts, leading to unsatisfactory performance. In this paper, we present a novel architecture, Unsupervised Multi-graph Merge Adversarial Network (UMMAN). UMMAN can obtain the embeddings of nodes in the Multi-Graph in an unsupervised scenario, so that it helps learn the multiplex association. Our method is the first to combine Graph Neural Network with the task of intestinal flora disease prediction. We employ complex relation-types to construct the Original-Graph and disrupt the relationships among nodes to generate corresponding Shuffled-Graph. We introduce the Node Feature Global Integration (NFGI) module to represent the global features of the graph. Furthermore, we design a joint loss comprising adversarial loss and hybrid attention loss to ensure that the real graph embedding aligns closely with the Original-Graph and diverges from the Shuffled-Graph. Comprehensive experiments on five classical OTU gut microbiome datasets demonstrate the effectiveness and stability of our method. (We will release our code soon.)

Microbial swarming on mucosal surfaces reshapes microbial communities and influences mucosal healing and antibiotic tolerance. Yet even with time-lapse microscopy and deep learning, analyses of swarming colonies remain descriptive and cannot forecast how their fronts reorganize in time. This limitation is significant because the advancing edge determines access to nutrients, host tissue and competing microbes. We recast the expansion of Enterobacter sp. SM3 swarms as a problem of morphological forecasting, and assemble SwarmEvo, a time-lapse dataset represented as boundary-resolved segmentations. TexPol--Net, a texture- and geometry-aware segmentation model, sharpens diffuse edges and preserves fingered fronts, creating a stable substrate for dynamics. On this representation, we develop Morpher, an autoregressive forecasting network with a ``Morphon'' memory that links local curvature to long-range temporal dependencies. Morpher outperforms leading video-prediction models in maintaining front localization and anisotropic branching, and modest segmentation improvements yield noticeably more stable forecasts. Ablations across sequence models, inference strategies and observation ratios show that attention-based architectures with structural memory best preserve dense-finger propagation. By uniting geometry-aware segmentation with morphology-level forecasting, this framework turns swarming expansion into a predictive dynamical system, enabling quantitative interrogation and potential control of microbial collectives during mucosal repair and gut ecosystem engineering.