Daily Papers

Large Language Models (LLMs) have the potential to semi-automate some process mining (PM) analyses. While commercial models are already adequate for many analytics tasks, the competitive level of open-source LLMs in PM tasks is unknown. In this paper, we propose PM-LLM-Benchmark, the first comprehensive benchmark for PM focusing on domain knowledge (process-mining-specific and process-specific) and on different implementation strategies. We focus also on the challenges in creating such a benchmark, related to the public availability of the data and on evaluation biases by the LLMs. Overall, we observe that most of the considered LLMs can perform some process mining tasks at a satisfactory level, but tiny models that would run on edge devices are still inadequate. We also conclude that while the proposed benchmark is useful for identifying LLMs that are adequate for process mining tasks, further research is needed to overcome the evaluation biases and perform a more thorough ranking of the competitive LLMs.

Existing multilingual benchmarks for Large Vision Language Models (LVLMs) suffer from limitations including language-specific content biases, disjointed multimodal input formats, and a lack of safety evaluation. To address these gaps, we propose PM4Bench, the first Parallel Multilingual Multi-Modal Multi-task Benchmark for LVLMs. PM4Bench features a parallel corpus design across 10 languages, enabling fair and accurate cross-lingual comparisons. It includes the vision setting where text and queries are embedded in images, requiring LVLMs to simultaneously "see", "read", and "think", aligning with real-world applications. Additionally, PM4Bench incorporates safety evaluations, addressing critical oversight in existing multilingual benchmarks. Using PM4Bench, we evaluate 11 mainstream LVLMs, revealing significant cross-linguistic performance disparities, particularly in vision settings, and identifying OCR capability as a key determinant of these imbalances. We will release PM4Bench at https://github.com/opendatalab/PM4Bench .

Prompt optimization offers a practical and broadly applicable alternative to fine-tuning for improving large language model (LLM) performance. However, existing methods often rely on costly output generation, self-critiquing abilities, or human-annotated preferences, which limit their scalability, especially for smaller or non-instruction-tuned models. We introduce PMPO (Probabilistic Metric Prompt Optimization), a unified framework that refines prompts using token-level cross-entropy loss as a direct, lightweight evaluation signal. PMPO identifies low-quality prompt segments by masking and measuring their impact on loss, then rewrites and selects improved variants by minimizing loss over positive and negative examples. Unlike prior methods, it requires no output sampling or human evaluation during optimization, relying only on forward passes and log-likelihoods. PMPO supports both supervised and preference-based tasks through a closely aligned loss-based evaluation strategy. Experiments show that PMPO consistently outperforms prior methods across model sizes and tasks: it achieves the highest average accuracy on BBH, performs strongly on GSM8K and AQUA-RAT, and improves AlpacaEval 2.0 win rates by over 19 points. These results highlight PMPO's effectiveness, efficiency, and broad applicability.

Large Language Models (LLMs) encounter significant challenges in continual learning due to catastrophic forgetting, where new information overwrites previously acquired knowledge. This limitation leads to substantial environmental and economic waste. In this study, we introduce the PMoE, Progressive Mixture of Experts with Asymmetric Transformer, which aims to minimize forgetting by utilizing an asymmetric design with shallow layers dedicated to general knowledge and deep layers for new knowledge. PMoE incorporates progressively added experts in deep layers and a router that allocates new knowledge to the appropriate experts efficiently. The router, positioned adjacent to the deep layers, utilizes deep features aggregating consolidated information. This enables the router to perform efficiently, allocating new knowledge to the appropriate experts, which progressively increase in the deep layers. Extensive experiments on TRACE datasets and general language understanding datasets demonstrate that the proposed PMoE outperforms previous state-of-the-art approaches.

Satellite imagery analysis plays a vital role in remote sensing, but the information loss caused by cloud cover seriously hinders its application. This study presents a high-performance cloud removal architecture called Progressive Multi-scale Attention Autoencoder (PMAA), which simultaneously leverages global and local information. It mainly consists of a cloud detection backbone and a cloud removal module. The cloud detection backbone uses cloud masks to reinforce cloudy areas to prompt the cloud removal module. The cloud removal module mainly comprises a novel Multi-scale Attention Module (MAM) and a Local Interaction Module (LIM). PMAA establishes the long-range dependency of multi-scale features using MAM and modulates the reconstruction of the fine-grained details using LIM, allowing for the simultaneous representation of fine- and coarse-grained features at the same level. With the help of diverse and multi-scale feature representation, PMAA outperforms the previous state-of-the-art model CTGAN consistently on the Sen2_MTC_Old and Sen2_MTC_New datasets. Furthermore, PMAA has a considerable efficiency advantage, with only 0.5% and 14.6% of the parameters and computational complexity of CTGAN, respectively. These extensive results highlight the potential of PMAA as a lightweight cloud removal network suitable for deployment on edge devices. We will release the code and trained models to facilitate the study in this direction.

We introduce PM25Vision (PM25V), the largest and most comprehensive dataset to date for estimating air quality - specifically PM2.5 concentrations - from street-level images. The dataset contains over 11,114 images matched with timestamped and geolocated PM2.5 readings across 3,261 AQI monitoring stations and 11 years, significantly exceeding the scale of previous benchmarks. The spatial accuracy of this dataset has reached 5 kilometers, far exceeding the city-level accuracy of many datasets. We describe the data collection, synchronization, and cleaning pipelines, and provide baseline model performances using CNN and transformer architectures. Our dataset is publicly available.

Low-rank adaptation (LoRA) and its variants have recently gained much interest due to their ability to avoid excessive inference costs. However, LoRA still encounters the following challenges: (1) Limitation of low-rank assumption; and (2) Its initialization method may be suboptimal. To this end, we propose PMSS(Pre-trained Matrices Skeleton Selection), which enables high-rank updates with low costs while leveraging semantic and linguistic information inherent in pre-trained weight. It achieves this by selecting skeletons from the pre-trained weight matrix and only learning a small matrix instead. Experiments demonstrate that PMSS outperforms LoRA and other fine-tuning methods across tasks with much less trainable parameters. We demonstrate its effectiveness, especially in handling complex tasks such as DROP benchmark(+3.4%/+5.9% on LLaMA2-7B/13B) and math reasoning(+12.89%/+5.61%/+3.11% on LLaMA2-7B, Mistral-7B and Gemma-7B of GSM8K). The code and model will be released soon.

Speech-driven 3D facial animation has improved a lot recently while most related works only utilize acoustic modality and neglect the influence of visual and textual cues, leading to unsatisfactory results in terms of precision and coherence. We argue that visual and textual cues are not trivial information. Therefore, we present a novel framework, namely PMMTalk, using complementary Pseudo Multi-Modal features for improving the accuracy of facial animation. The framework entails three modules: PMMTalk encoder, cross-modal alignment module, and PMMTalk decoder. Specifically, the PMMTalk encoder employs the off-the-shelf talking head generation architecture and speech recognition technology to extract visual and textual information from speech, respectively. Subsequently, the cross-modal alignment module aligns the audio-image-text features at temporal and semantic levels. Then PMMTalk decoder is employed to predict lip-syncing facial blendshape coefficients. Contrary to prior methods, PMMTalk only requires an additional random reference face image but yields more accurate results. Additionally, it is artist-friendly as it seamlessly integrates into standard animation production workflows by introducing facial blendshape coefficients. Finally, given the scarcity of 3D talking face datasets, we introduce a large-scale 3D Chinese Audio-Visual Facial Animation (3D-CAVFA) dataset. Extensive experiments and user studies show that our approach outperforms the state of the art. We recommend watching the supplementary video.

Voice conversion as the style transfer task applied to speech, refers to converting one person's speech into a new speech that sounds like another person's. Up to now, there has been a lot of research devoted to better implementation of VC tasks. However, a good voice conversion model should not only match the timbre information of the target speaker, but also expressive information such as prosody, pace, pause, etc. In this context, prosody modeling is crucial for achieving expressive voice conversion that sounds natural and convincing. Unfortunately, prosody modeling is important but challenging, especially without text transcriptions. In this paper, we firstly propose a novel voice conversion framework named 'PMVC', which effectively separates and models the content, timbre, and prosodic information from the speech without text transcriptions. Specially, we introduce a new speech augmentation algorithm for robust prosody extraction. And building upon this, mask and predict mechanism is applied in the disentanglement of prosody and content information. The experimental results on the AIShell-3 corpus supports our improvement of naturalness and similarity of converted speech.

Model editing techniques modify a minor proportion of knowledge in Large Language Models (LLMs) at a relatively low cost, which have demonstrated notable success. Existing methods assume Transformer Layer (TL) hidden states are values of key-value memories of the Feed-Forward Network (FFN). They usually optimize the TL hidden states to memorize target knowledge and use it to update the weights of the FFN in LLMs. However, the information flow of TL hidden states comes from three parts: Multi-Head Self-Attention (MHSA), FFN, and residual connections. Existing methods neglect the fact that the TL hidden states contains information not specifically required for FFN. Consequently, the performance of model editing decreases. To achieve more precise model editing, we analyze hidden states of MHSA and FFN, finding that MHSA encodes certain general knowledge extraction patterns. This implies that MHSA weights do not require updating when new knowledge is introduced. Based on above findings, we introduce PMET, which simultaneously optimizes Transformer Component (TC, namely MHSA and FFN) hidden states, while only using the optimized TC hidden states of FFN to precisely update FFN weights. Our experiments demonstrate that PMET exhibits state-of-the-art performance on both the COUNTERFACT and zsRE datasets. Our ablation experiments substantiate the effectiveness of our enhancements, further reinforcing the finding that the MHSA encodes certain general knowledge extraction patterns and indicating its storage of a small amount of factual knowledge. Our code is available at https://github.com/xpq-tech/PMET.

In this paper, we focus on the problem of Medical Visual Question Answering (MedVQA), which is crucial in efficiently interpreting medical images with vital clinic-relevant information. Firstly, we reframe the problem of MedVQA as a generation task that naturally follows the human-machine interaction, we propose a generative-based model for medical visual understanding by aligning visual information from a pre-trained vision encoder with a large language model. Secondly, we establish a scalable pipeline to construct a large-scale medical visual question-answering dataset, named PMC-VQA, which contains 227k VQA pairs of 149k images that cover various modalities or diseases. Thirdly, we pre-train our proposed model on PMC-VQA and then fine-tune it on multiple public benchmarks, e.g., VQA-RAD and SLAKE, outperforming existing work by a large margin. Additionally, we propose a test set that has undergone manual verification, which is significantly more challenging, even the best models struggle to solve.

This paper introduces PMIndiaSum, a new multilingual and massively parallel headline summarization corpus focused on languages in India. Our corpus covers four language families, 14 languages, and the largest to date, 196 language pairs. It provides a testing ground for all cross-lingual pairs. We detail our workflow to construct the corpus, including data acquisition, processing, and quality assurance. Furthermore, we publish benchmarks for monolingual, cross-lingual, and multilingual summarization by fine-tuning, prompting, as well as translate-and-summarize. Experimental results confirm the crucial role of our data in aiding the summarization of Indian texts. Our dataset is publicly available and can be freely modified and re-distributed.

Recently, Large Language Models (LLMs) have showcased remarkable capabilities in natural language understanding. While demonstrating proficiency in everyday conversations and question-answering situations, these models frequently struggle in domains that require precision, such as medical applications, due to their lack of domain-specific knowledge. In this paper, we describe the procedure for building a powerful, open-source language model specifically designed for medicine applications, termed as PMC-LLaMA. Our contributions are threefold: (i) we systematically investigate the process of adapting a general-purpose foundation language model towards medical domain, this involves data-centric knowledge injection through the integration of 4.8M biomedical academic papers and 30K medical textbooks, as well as comprehensive fine-tuning for alignment with domain-specific instructions; (ii) we contribute a large-scale, comprehensive dataset for instruction tuning. This dataset encompasses medical question-answering (QA), rationale for reasoning, and conversational dialogues, comprising a total of 202M tokens; (iii) we conduct thorough ablation studies to demonstrate the effectiveness of each proposed component. While evaluating on various public medical question-answering benchmarks, our lightweight PMCLLaMA, which consists of only 13 billion parameters, exhibits superior performance, even surpassing ChatGPT. All models, codes, datasets can be found in https://github.com/chaoyi-wu/PMC-LLaMA.

Foundation models trained on large-scale dataset gain a recent surge in CV and NLP. In contrast, development in biomedical domain lags far behind due to data scarcity. To address this issue, we build and release PMC-OA, a biomedical dataset with 1.6M image-caption pairs collected from PubMedCentral's OpenAccess subset, which is 8 times larger than before. PMC-OA covers diverse modalities or diseases, with majority of the image-caption samples aligned at finer-grained level, i.e., subfigure and subcaption. While pretraining a CLIP-style model on PMC-OA, our model named PMC-CLIP achieves state-of-the-art results on various downstream tasks, including image-text retrieval on ROCO, MedMNIST image classification, Medical VQA, i.e. +8.1% R@10 on image-text retrieval, +3.9% accuracy on image classification.

Objective: Data unavailability has been one of the biggest barriers in clinical natural language processing. This paper is aimed at providing a large-scale and publicly available patient note dataset, named PMC-Patients, with relevant articles and similar patients annotations. The ultimate goal of PMC-Patients is to facilitate the development of retrieval-based clinical decision support systems. Materials and Methods: To collect PMC-Patients, we extract patient notes from case reports in PubMed Central by recognizing certain section patterns. Patient-article relevance and patient-patient similarity are annotated by citation relationships in PubMed. In addition, we perform three tasks with PMC-Patients to demonstrate its utility in providing clinical decision support for a given patient, including (1) classifying whether another patient is similar, (2) retrieving similar patients in PMC-Patients, and (3) retrieving relevant articles in PubMed. Results: We collect and release PMC-Patients under the CC BY-NC-SA license, which becomes the largest publicly available patient note dataset so far. PMC-Patients contains 167k patient notes that are annotated with 3.1M relevant articles and 293k similar patients. Qualitative and quantitative analyses reveal the high quality and richness of our dataset. Experiments show that classifying the similarity of patient pairs is relatively easy, but it is hard to retrieve similar patients or relevant articles for a given patient from a large set of candidates. Conclusion: We present PMC-Patients, a large-scale dataset of patient notes with high quality, easy access, diverse conditions, and rich annotations. The proposed dataset can also serve as a hard benchmark for evaluating retrieval-based clinical decision support systems.

Parallel text is required for building high-quality machine translation (MT) systems, as well as for other multilingual NLP applications. For many South Asian languages, such data is in short supply. In this paper, we described a new publicly available corpus (PMIndia) consisting of parallel sentences which pair 13 major languages of India with English. The corpus includes up to 56000 sentences for each language pair. We explain how the corpus was constructed, including an assessment of two different automatic sentence alignment methods, and present some initial NMT results on the corpus.

Compound figures, which are multi-panel composites containing diverse subfigures, are ubiquitous in biomedical literature, yet large-scale subfigure extraction remains largely unaddressed. Prior work on subfigure extraction has been limited in both dataset size and generalizability, leaving a critical open question: How does high-fidelity image-text alignment via large-scale subfigure extraction impact representation learning in vision-language models? We address this gap by introducing a scalable subfigure extraction pipeline based on transformer-based object detection, trained on a synthetic corpus of 500,000 compound figures, and achieving state-of-the-art performance on both ImageCLEF 2016 and synthetic benchmarks. Using this pipeline, we release OPEN-PMC-18M, a large-scale high quality biomedical vision-language dataset comprising 18 million clinically relevant subfigure-caption pairs spanning radiology, microscopy, and visible light photography. We train and evaluate vision-language models on our curated datasets and show improved performance across retrieval, zero-shot classification, and robustness benchmarks, outperforming existing baselines. We release our dataset, models, and code to support reproducible benchmarks and further study into biomedical vision-language modeling and representation learning.

Quantization-Aware Training (QAT) integrates quantization into the training loop, enabling LLMs to learn robust low-bit representations, and is widely recognized as one of the most promising research directions. All current QAT research focuses on minimizing quantization error on full-precision models, where the full-precision accuracy acts as an upper bound (accuracy ceiling). No existing method has even attempted to surpass this ceiling. To break this ceiling, we propose a new paradigm: raising the ceiling (full-precision model), and then still quantizing it efficiently into 2 bits. We propose Fairypm i, the first 2-bit quantization framework for complex-valued LLMs. Specifically, our method leverages the representational advantages of the complex domain to boost full-precision accuracy. We map weights to the fourth roots of unity {pm1, pm i}, forming a perfectly symmetric and information-theoretically optimal 2-bit representation. Importantly, each quantized weight has either a zero real or imaginary part, enabling multiplication-free inference using only additions and element swaps. Experimental results show that Fairypm i outperforms the ceiling of existing 2-bit quantization approaches in terms of both PPL and downstream tasks, while maintaining strict storage and compute efficiency. This work opens a new direction for building highly accurate and practical LLMs under extremely low-bit constraints.

Personalized vaccines and T-cell immunotherapies depend critically on identifying peptide-MHC class I (pMHC-I) interactions capable of eliciting potent immune responses. However, current benchmarks and models inherit biases present in mass-spectrometry and binding-assay datasets, limiting discovery of novel peptide ligands. To address this issue, we introduce a structure-guided benchmark of pMHC-I peptides designed using diffusion models conditioned on crystal structure interaction distances. Spanning twenty high-priority HLA alleles, this benchmark is independent of previously characterized peptides yet reproduces canonical anchor residue preferences, indicating structural generalization without experimental dataset bias. Using this resource, we demonstrate that state-of-the-art sequence-based predictors perform poorly at recognizing the binding potential of these structurally stable designs, indicating allele-specific limitations invisible in conventional evaluations. Our geometry-aware design pipeline yields peptides with high predicted structural integrity and higher residue diversity than existing datasets, representing a key resource for unbiased model training and evaluation. Our code, and data are available at: https://github.com/sermare/struct-mhc-dev.

Predicting peptide--major histocompatibility complex I (pMHC-I) binding affinity remains challenging due to extreme allelic diversity (sim30,000 HLA alleles), severe data scarcity for most alleles, and noisy experimental measurements. Current methods particularly struggle with underrepresented alleles and quantitative binding prediction. We test whether domain-specific continued pre-training of protein language models is beneficial for their application to pMHC-I binding affinity prediction. Starting from ESM Cambrian (300M parameters), we perform masked-language modeling (MLM)-based continued pre-training on HLA-associated peptides (epitopes), testing two input formats: epitope sequences alone versus epitopes concatenated with HLA heavy chain sequences. We then fine-tune for functional IC_{50} binding affinity prediction using only high-quality quantitative data, avoiding mass spectrometry biases that are inherited by existing methods.

Semantic word embeddings represent the meaning of a word via a vector, and are created by diverse methods. Many use nonlinear operations on co-occurrence statistics, and have hand-tuned hyperparameters and reweighting methods. This paper proposes a new generative model, a dynamic version of the log-linear topic model of~mnih2007three. The methodological novelty is to use the prior to compute closed form expressions for word statistics. This provides a theoretical justification for nonlinear models like PMI, word2vec, and GloVe, as well as some hyperparameter choices. It also helps explain why low-dimensional semantic embeddings contain linear algebraic structure that allows solution of word analogies, as shown by~mikolov2013efficient and many subsequent papers. Experimental support is provided for the generative model assumptions, the most important of which is that latent word vectors are fairly uniformly dispersed in space.

This paper investigates the possibility of high resolution mapping of PM2.5 concentration over Tehran city using high resolution satellite AOD (MAIAC) retrievals. For this purpose, a framework including three main stages, data preprocessing; regression modeling; and model deployment was proposed. The output of the framework was a machine learning model trained to predict PM2.5 from MAIAC AOD retrievals and meteorological data. The results of model testing revealed the efficiency and capability of the developed framework for high resolution mapping of PM2.5, which was not realized in former investigations performed over the city. Thus, this study, for the first time, realized daily, 1 km resolution mapping of PM2.5 in Tehran with R2 around 0.74 and RMSE better than 9.0 mg/m3. Keywords: MAIAC; MODIS; AOD; Machine learning; Deep learning; PM2.5; Regression

Large language models (LLMs) have revolutionized artificial intelligence, yet their massive memory and computational demands necessitate aggressive quantization, increasingly pushing representations toward the theoretical limit of a single bit. While complex-valued LLMs, such as iFairy, offer a superior chance for low-bit representation compared to real-valued counterparts, they require training from scratch, preventing the utilization of the vast ecosystem of pre-trained real-valued foundation models. Here we present Fairy2i, a universal framework that transforms pre-trained real-valued layers into an equivalent widely-linear complex form, enabling extremely low-bit quantization while reusing existing checkpoints. By proving a lossless mathematical equivalence between real and widely-linear maps, we convert standard Transformers into the complex domain and employ a phase-aware quantization scheme with a highly efficient codebook of fourth roots of unity. Furthermore, we introduce a recursive residual quantization mechanism that iteratively minimizes quantization error, allowing inference to proceed via efficient multiplication-free accumulation. We demonstrate that Fairy2i restores the performance of LLaMA-2 7B at an effective 2-bit precision to levels nearly comparable with full-precision baselines, significantly outperforming state-of-the-art real-valued binary and ternary quantization methods. This work bridges the gap between the representational efficiency of complex-valued arithmetic and the practical utility of pre-trained models, paving a new way for efficient inference on commodity hardware.