Daily Papers

Code generation aims to automatically generate code from input requirements, significantly enhancing development efficiency. Recent large language models (LLMs) based approaches have shown promising results and revolutionized code generation task. Despite the promising performance, LLMs often generate contents with hallucinations, especially for the code generation scenario requiring the handling of complex contextual dependencies in practical development process. Although previous study has analyzed hallucinations in LLM-powered code generation, the study is limited to standalone function generation. In this paper, we conduct an empirical study to study the phenomena, mechanism, and mitigation of LLM hallucinations within more practical and complex development contexts in repository-level generation scenario. First, we manually examine the code generation results from six mainstream LLMs to establish a hallucination taxonomy of LLM-generated code. Next, we elaborate on the phenomenon of hallucinations, analyze their distribution across different models. We then analyze causes of hallucinations and identify four potential factors contributing to hallucinations. Finally, we propose an RAG-based mitigation method, which demonstrates consistent effectiveness in all studied LLMs. The replication package including code, data, and experimental results is available at https://github.com/DeepSoftwareAnalytics/LLMCodingHallucination

Retrieval-Augmented Generation (RAG) has significantly enhanced the factual accuracy and domain adaptability of Large Language Models (LLMs). This advancement has enabled their widespread deployment across sensitive domains such as healthcare, finance, and enterprise applications. RAG mitigates hallucinations by integrating external knowledge, yet introduces privacy risk and security risk, notably data breaching risk and data poisoning risk. While recent studies have explored prompt injection and poisoning attacks, there remains a significant gap in comprehensive research on controlling inbound and outbound query flows to mitigate these threats. In this paper, we propose an AI firewall, ControlNET, designed to safeguard RAG-based LLM systems from these vulnerabilities. ControlNET controls query flows by leveraging activation shift phenomena to detect adversarial queries and mitigate their impact through semantic divergence. We conduct comprehensive experiments on four different benchmark datasets including Msmarco, HotpotQA, FinQA, and MedicalSys using state-of-the-art open source LLMs (Llama3, Vicuna, and Mistral). Our results demonstrate that ControlNET achieves over 0.909 AUROC in detecting and mitigating security threats while preserving system harmlessness. Overall, ControlNET offers an effective, robust, harmless defense mechanism, marking a significant advancement toward the secure deployment of RAG-based LLM systems.

The Internet of Things has expanded rapidly, transforming communication and operations across industries but also increasing the attack surface and security breaches. Artificial Intelligence plays a key role in securing IoT, enabling attack detection, attack behavior analysis, and mitigation suggestion. Despite advancements, evaluations remain purely qualitative, and the lack of a standardized, objective benchmark for quantitatively measuring AI-based attack analysis and mitigation hinders consistent assessment of model effectiveness. In this work, we propose a hybrid framework combining Machine Learning (ML) for multi-class attack detection with Large Language Models (LLMs) for attack behavior analysis and mitigation suggestion. After benchmarking several ML and Deep Learning (DL) classifiers on the Edge-IIoTset and CICIoT2023 datasets, we applied structured role-play prompt engineering with Retrieval-Augmented Generation (RAG) to guide ChatGPT-o3 and DeepSeek-R1 in producing detailed, context-aware responses. We introduce novel evaluation metrics for quantitative assessment to guide us and an ensemble of judge LLMs, namely ChatGPT-4o, DeepSeek-V3, Mixtral 8x7B Instruct, Gemini 2.5 Flash, Meta Llama 4, TII Falcon H1 34B Instruct, xAI Grok 3, and Claude 4 Sonnet, to independently evaluate the responses. Results show that Random Forest has the best detection model, and ChatGPT-o3 outperformed DeepSeek-R1 in attack analysis and mitigation.

Retrieval-Augmented Generation (RAG) methods have proven highly effective for tasks requiring factual consistency and robust knowledge retrieval. However, large-scale RAG systems consume significant computational resources and are prone to generating hallucinated content from Humans. In this work, we introduce DRAG, a novel framework for distilling RAG knowledge from large-scale Language Models (LLMs) into small LMs (SLMs). Our approach leverages evidence- and knowledge graph-based distillation, ensuring that the distilled model retains critical factual knowledge while significantly reducing model size and computational cost. By aligning the smaller model's predictions with a structured knowledge graph and ranked evidence, DRAG effectively mitigates hallucinations and improves factual accuracy. We further present a case demonstrating how our framework mitigates user privacy risks and introduce a corresponding benchmark. Experimental evaluations on multiple benchmarks demonstrate that our method outperforms the prior competitive RAG methods like MiniRAG for SLMs by up to 27.7% using the same models, preserving high-level efficiency and reliability. With DRAG, we provide a practical and resource-efficient roadmap to deploying enhanced retrieval and generation capabilities in small-sized LLMs.

The rapid advancement of large language models (LLMs) has significantly impacted various domains, including healthcare and biomedicine. However, the phenomenon of hallucination, where LLMs generate outputs that deviate from factual accuracy or context, poses a critical challenge, especially in high-stakes domains. This paper conducts a scoping study of existing techniques for mitigating hallucinations in knowledge-based task in general and especially for medical domains. Key methods covered in the paper include Retrieval-Augmented Generation (RAG)-based techniques, iterative feedback loops, supervised fine-tuning, and prompt engineering. These techniques, while promising in general contexts, require further adaptation and optimization for the medical domain due to its unique demands for up-to-date, specialized knowledge and strict adherence to medical guidelines. Addressing these challenges is crucial for developing trustworthy AI systems that enhance clinical decision-making and patient safety as well as accuracy of biomedical scientific research.

This paper introduces VimoRAG, a novel video-based retrieval-augmented motion generation framework for motion large language models (LLMs). As motion LLMs face severe out-of-domain/out-of-vocabulary issues due to limited annotated data, VimoRAG leverages large-scale in-the-wild video databases to enhance 3D motion generation by retrieving relevant 2D human motion signals. While video-based motion RAG is nontrivial, we address two key bottlenecks: (1) developing an effective motion-centered video retrieval model that distinguishes human poses and actions, and (2) mitigating the issue of error propagation caused by suboptimal retrieval results. We design the Gemini Motion Video Retriever mechanism and the Motion-centric Dual-alignment DPO Trainer, enabling effective retrieval and generation processes. Experimental results show that VimoRAG significantly boosts the performance of motion LLMs constrained to text-only input.

Retrieval-augmented generation degrades when scaled to large, heterogeneous document collections, where dense similarity loses discriminative power, and top-k retrieval increasingly returns semantically similar but contextually incorrect chunks. We refer to this failure mode as vector search dilution. Even when using hybrid dense+sparse retrieval, we observed this firsthand in a deployed Wyoming Department of Transportation corpus, where scaling from 54 to 1,128 documents (88,907 chunks) reduced accuracy from 75% to below 40%. To address this dilution, we propose MASDR-RAG ( Multi-Agent Scoped Domain Retrieval for RAG) and evaluate it on 200 expert-validated queries across five LLM backbones, six corpora, and two index stacks. Our results indicate that domain scoping using organizational metadata is the key fix, significantly improving P@10 from 0.77 to 0.86 (p < 0.05). Furthermore, our investigation of multi-agent orchestration revealed that a high degree of configuration dependence results --creating what we call the precision-faithfulness paradox. Based on these varied outcomes, our practical recommendation is simple: scope first, then perform a single synthesis call, reserving full multi-agent orchestration for genuinely multi-domain corpora paired with native-tool-call backbones. Code and Data will be made public upon acceptance.

While Retrieval-Augmented Generation (RAG) is one of the dominant paradigms for enhancing Large Vision-Language Models (LVLMs) on knowledge-based VQA tasks, recent work attributes RAG failures to insufficient attention towards the retrieved context, proposing to reduce the attention allocated to image tokens. In this work, we identify a distinct failure mode that previous study overlooked: Attention Distraction (AD). When the retrieved context is sufficient (highly relevant or including the correct answer), the retrieved text suppresses the visual attention globally, and the attention on image tokens shifts away from question-relevant regions. This leads to failures on questions the model could originally answer correctly without the retrieved text. To mitigate this issue, we propose MAD-RAG, a training-free intervention that decouples visual grounding from context integration through a dual-question formulation, combined with attention mixing to preserve image-conditioned evidence. Extensive experiments on OK-VQA, E-VQA, and InfoSeek demonstrate that MAD-RAG consistently outperforms existing baselines across different model families, yielding absolute gains of up to 4.76%, 9.20%, and 6.18% over the vanilla RAG baseline. Notably, MAD-RAG rectifies up to 74.68% of failure cases with negligible computational overhead.

Retrieval-Augmented Generation (RAG) has emerged as the predominant paradigm for grounding Large Language Model outputs in factual knowledge, effectively mitigating hallucinations. However, conventional RAG systems operate under a "retrieve-always" assumption, querying vector databases for every input regardless of query complexity. This static approach incurs substantial computational overhead and inference latency, particularly problematic for high-throughput production deployments. We introduce L-RAG (Lazy Retrieval-Augmented Generation), an adaptive framework that implements hierarchical context management through entropy-based gating. L-RAG employs a two-tier architecture: queries are first processed with a compact document summary, and expensive chunk retrieval is triggered only when the model's predictive entropy exceeds a calibrated threshold, signaling genuine uncertainty. Through experiments on SQuAD 2.0 (N=500) using the Phi-2 model, we demonstrate that L-RAG provides a tunable accuracy-efficiency trade-off: at a conservative threshold (tau=0.5), L-RAG achieves 78.2% accuracy, matching Standard RAG (77.8%), with 8% retrieval reduction; at a balanced threshold (tau=1.0), retrieval reduction increases to 26% with modest accuracy trade-off (76.0%). Latency analysis shows that L-RAG saves 80-210ms per query when retrieval latency exceeds 500ms. Analysis of entropy distributions reveals statistically significant separation (p < 0.001) between correct predictions (H=1.72) and errors (H=2.20), validating entropy as a reliable uncertainty signal. L-RAG offers a practical, training-free approach toward more efficient RAG deployment, providing system architects with a configurable knob to balance accuracy and throughput requirements.

Retrieval-Augmented Generation (RAG), by integrating non-parametric knowledge from external knowledge bases into models, has emerged as a promising approach to enhancing response accuracy while mitigating factual errors and hallucinations. This method has been widely applied in tasks such as Question Answering (QA). However, existing RAG methods struggle with open-domain QA tasks because they perform independent retrieval operations and directly incorporate the retrieved information into generation without maintaining a summarizing memory or using adaptive retrieval strategies, leading to noise from redundant information and insufficient information integration. To address these challenges, we propose Adaptive memory-based optimization for enhanced RAG (Amber) for open-domain QA tasks, which comprises an Agent-based Memory Updater, an Adaptive Information Collector, and a Multi-granular Content Filter, working together within an iterative memory updating paradigm. Specifically, Amber integrates and optimizes the language model's memory through a multi-agent collaborative approach, ensuring comprehensive knowledge integration from previous retrieval steps. It dynamically adjusts retrieval queries and decides when to stop retrieval based on the accumulated knowledge, enhancing retrieval efficiency and effectiveness. Additionally, it reduces noise by filtering irrelevant content at multiple levels, retaining essential information to improve overall model performance. We conduct extensive experiments on several open-domain QA datasets, and the results demonstrate the superiority and effectiveness of our method and its components. The source code is available https://anonymous.4open.science/r/Amber-B203/.

In recent years, 3D scene graphs have emerged as a powerful world representation, offering both geometric accuracy and semantic richness. Combining 3D scene graphs with large language models enables robots to reason, plan, and navigate in complex human-centered environments. However, current approaches for constructing 3D scene graphs are semantically limited to a predefined set of relationships, and their serialization in large environments can easily exceed an LLM's context window. We introduce KeySG, a framework that represents 3D scenes as a hierarchical graph consisting of floors, rooms, objects, and functional elements, where nodes are augmented with multi-modal information extracted from keyframes selected to optimize geometric and visual coverage. The keyframes allow us to efficiently leverage VLM to extract scene information, alleviating the need to explicitly model relationship edges between objects, enabling more general, task-agnostic reasoning and planning. Our approach can process complex and ambiguous queries while mitigating the scalability issues associated with large scene graphs by utilizing a hierarchical retrieval-augmented generation (RAG) pipeline to extract relevant context from the graph. Evaluated across four distinct benchmarks -- including 3D object segmentation and complex query retrieval -- KeySG outperforms prior approaches on most metrics, demonstrating its superior semantic richness and efficiency.

The continued promise of Large Language Models (LLMs), particularly in their natural language understanding and generation capabilities, has driven a rapidly increasing interest in identifying and developing LLM use cases. In an effort to complement the ingrained "knowledge" of LLMs, Retrieval-Augmented Generation (RAG) techniques have become widely popular. At its core, RAG involves the coupling of LLMs with domain-specific knowledge bases, whereby the generation of a response to a user question is augmented with contextual and up-to-date information. The proliferation of RAG has sparked concerns about data privacy, particularly with the inherent risks that arise when leveraging databases with potentially sensitive information. Numerous recent works have explored various aspects of privacy risks in RAG systems, from adversarial attacks to proposed mitigations. With the goal of surveying and unifying these works, we ask one simple question: What are the privacy risks in RAG, and how can they be measured and mitigated? To answer this question, we conduct a systematic literature review of RAG works addressing privacy, and we systematize our findings into a comprehensive set of privacy risks, mitigation techniques, and evaluation strategies. We supplement these findings with two primary artifacts: a Taxonomy of RAG Privacy Risks and a RAG Privacy Process Diagram. Our work contributes to the study of privacy in RAG not only by conducting the first systematization of risks and mitigations, but also by uncovering important considerations when mitigating privacy risks in RAG systems and assessing the current maturity of proposed mitigations.

Retrieval-Augmented Generation (RAG) improves the factual accuracy of large language model (LLM) outputs by grounding generation in external knowledge. Recent agentic RAG systems extend this paradigm with critical agents to evaluate model responses and iteratively refine outputs. However, most prior work implicitly assumes reliable critic feedback and focuses on planning strategies, while paying limited attention to the robustness of the error-correction process itself, which can be impacted by misaligned error categories and ineffective or incorrect corrections. Here, we hypothesize that RAG performance can be improved without explicit error categorization. We propose RePAIR, a response-action learning paradigm that directly maps flawed RAG outputs to error-mitigating action plans without relying on fine-grained error taxonomies and explicit critic supervision. Across multiple benchmarks, RePAIR consistently improves agentic RAG performance.

Large language models (LLMs) are reshaping numerous facets of our daily lives, leading widespread adoption as web-based services. Despite their versatility, LLMs face notable challenges, such as generating hallucinated content and lacking access to up-to-date information. Lately, to address such limitations, Retrieval-Augmented Generation (RAG) has emerged as a promising direction by generating responses grounded in external knowledge sources. A typical RAG system consists of i) a retriever that probes a group of relevant passages from a knowledge base and ii) a generator that formulates a response based on the retrieved content. However, as with other AI systems, recent studies demonstrate the vulnerability of RAG, such as knowledge corruption attacks by injecting misleading information. In response, several defense strategies have been proposed, including having LLMs inspect the retrieved passages individually or fine-tuning robust retrievers. While effective, such approaches often come with substantial computational costs. In this work, we introduce RAGDefender, a resource-efficient defense mechanism against knowledge corruption (i.e., by data poisoning) attacks in practical RAG deployments. RAGDefender operates during the post-retrieval phase, leveraging lightweight machine learning techniques to detect and filter out adversarial content without requiring additional model training or inference. Our empirical evaluations show that RAGDefender consistently outperforms existing state-of-the-art defenses across multiple models and adversarial scenarios: e.g., RAGDefender reduces the attack success rate (ASR) against the Gemini model from 0.89 to as low as 0.02, compared to 0.69 for RobustRAG and 0.24 for Discern-and-Answer when adversarial passages outnumber legitimate ones by a factor of four (4x).

Retrieval-augmented generation (RAG) is indispensable for enhancing large language models. However, RAGs are increasingly susceptible to poisoning attacks, in which adversarial documents are injected to manipulate generator outputs. Previous methods rely on output-side signals such as perplexity and consistency checks to detect such attacks. Nevertheless, our analysis reveals that deliberate attacks often induce false confidence, where poisoned outputs exhibit even lower perplexity than benign ones, rendering uncertainty-based detection ineffective. To address this challenge, we explore the internal dynamics of the generator and identify a distinctive signature termed Attention Collapse. Unlike the dispersed attention in benign generations, attacked generations exhibit a decrease in entropy as attention concentrates on poisoned documents. Building on these findings, we propose D-SCAN (Document-level Signal Collapse Analysis), a lightweight detection framework that monitors attention dynamics to identify attacked generations. Extensive experiments on multiple attack benchmarks demonstrate the effectiveness of our method. Moreover, D-SCAN can detect attacks even when they fail to alter the final answer. Code is available at https://github.com/yingtaoren/D-Scan.git.

Retrieval-Augmented Generation (RAG) has emerged as a promising approach to enhance the timeliness of knowledge updates and the factual accuracy of responses in large language models. However, incorporating a large number of retrieved documents significantly increases input length, leading to higher computational costs. Existing approaches to document compression tailored for RAG often degrade task performance, as they typically rely on predefined heuristics in the absence of clear compression guidelines. These heuristics fail to ensure that the compressed content effectively supports downstream tasks. To address these limitations, we propose CORE, a novel method for lossless context compression in RAG. CORE is optimized end-to-end and does not depend on predefined compression labels, which are often impractical to obtain. Instead, it leverages downstream task performance as a feedback signal, iteratively refining the compression policy to enhance task effectiveness. Extensive experiments across four datasets demonstrate the effectiveness of CORE. With a high compression ratio of 3%, CORE not only prevents performance degradation compared to including full documents (i.e., without compression) but also improves the average Exact Match (EM) score by 3.3 points. The code for CORE will be released soon.

Retrieval-Augmented Generation (RAG) systems based on Large Language Models (LLMs) have become a core technology for tasks such as question-answering (QA) and content generation. RAG poisoning is an attack method to induce LLMs to generate the attacker's expected text by injecting poisoned documents into the database of RAG systems. Existing research can be broadly divided into two classes: white-box methods and black-box methods. White-box methods utilize gradient information to optimize poisoned documents, and black-box methods use a pre-trained LLM to generate them. However, existing white-box methods require knowledge of the RAG system's internal composition and implementation details, whereas black-box methods are unable to utilize interactive information. In this work, we propose the RIPRAG attack framework, an end-to-end attack pipeline that treats the target RAG system as a black box and leverages our proposed Reinforcement Learning from Black-box Feedback (RLBF) method to optimize the generation model for poisoned documents. We designed two kinds of rewards: similarity reward and attack reward. Experimental results demonstrate that this method can effectively execute poisoning attacks against most complex RAG systems, achieving an attack success rate (ASR) improvement of up to 0.72 compared to baseline methods. This highlights prevalent deficiencies in current defensive methods and provides critical insights for LLM security research.

Retrieval-augmented generation (RAG) systems are gaining traction in enterprise settings, yet stringent data protection regulations prevent many organizations from using cloud-based services, necessitating on-premises deployments. While existing blueprints and reference architectures focus on cloud deployments and lack enterprise-grade components, comprehensive on-premises implementation frameworks remain scarce. This paper aims to address this gap by presenting a comprehensive AI engineering blueprint for scalable on-premises enterprise RAG solutions. It is designed to address common challenges and streamline the integration of RAG into existing enterprise infrastructure. The blueprint provides: (1) an end-to-end reference architecture described using the 4+1 view model, (2) a reference application for on-premises deployment, and (3) best practices for tooling, development, and CI/CD pipelines, all publicly available on GitHub. Ongoing case studies and expert interviews with industry partners will assess its practical benefits.

Retrieval-Augmented Generation (RAG) is an advanced technique designed to address the challenges of Artificial Intelligence-Generated Content (AIGC). By integrating context retrieval into content generation, RAG provides reliable and up-to-date external knowledge, reduces hallucinations, and ensures relevant context across a wide range of tasks. However, despite RAG's success and potential, recent studies have shown that the RAG paradigm also introduces new risks, including robustness issues, privacy concerns, adversarial attacks, and accountability issues. Addressing these risks is critical for future applications of RAG systems, as they directly impact their trustworthiness. Although various methods have been developed to improve the trustworthiness of RAG methods, there is a lack of a unified perspective and framework for research in this topic. Thus, in this paper, we aim to address this gap by providing a comprehensive roadmap for developing trustworthy RAG systems. We place our discussion around five key perspectives: reliability, privacy, safety, fairness, explainability, and accountability. For each perspective, we present a general framework and taxonomy, offering a structured approach to understanding the current challenges, evaluating existing solutions, and identifying promising future research directions. To encourage broader adoption and innovation, we also highlight the downstream applications where trustworthy RAG systems have a significant impact.

This study presents Poison-RAG, a framework for adversarial data poisoning attacks targeting retrieval-augmented generation (RAG)-based recommender systems. Poison-RAG manipulates item metadata, such as tags and descriptions, to influence recommendation outcomes. Using item metadata generated through a large language model (LLM) and embeddings derived via the OpenAI API, we explore the impact of adversarial poisoning attacks on provider-side, where attacks are designed to promote long-tail items and demote popular ones. Two attack strategies are proposed: local modifications, which personalize tags for each item using BERT embeddings, and global modifications, applying uniform tags across the dataset. Experiments conducted on the MovieLens dataset in a black-box setting reveal that local strategies improve manipulation effectiveness by up to 50\%, while global strategies risk boosting already popular items. Results indicate that popular items are more susceptible to attacks, whereas long-tail items are harder to manipulate. Approximately 70\% of items lack tags, presenting a cold-start challenge; data augmentation and synthesis are proposed as potential defense mechanisms to enhance RAG-based systems' resilience. The findings emphasize the need for robust metadata management to safeguard recommendation frameworks. Code and data are available at https://github.com/atenanaz/Poison-RAG.

Retrieval-augmented generation (RAG) systems put more and more emphasis on grounding their responses in user-generated content found on the Web, amplifying both their usefulness and their attack surface. Most notably, indirect prompt injection and retrieval poisoning attack the web-native carriers that survive ingestion pipelines and are very concerning. We provide OpenRAG-Soc, a compact, reproducible benchmark-and-harness for web-facing RAG evaluation under these threats, in a discrete data package. The suite combines a social corpus with interchangeable sparse and dense retrievers and deployable mitigations - HTML/Markdown sanitization, Unicode normalization, and attribution-gated answered. It standardizes end-to-end evaluation from ingestion to generation and reports attacks time of one of the responses at answer time, rank shifts in both sparse and dense retrievers, utility and latency, allowing for apples-to-apples comparisons across carriers and defenses. OpenRAG-Soc targets practitioners who need fast, and realistic tests to track risk and harden deployments.

Retrieval-Augmented Generation (RAG) systems often fail on multi-hop queries when the initial retrieval misses a bridge fact. Prior corrective approaches, such as Self-RAG, CRAG, and Adaptive-k, typically address this by adding more context or pruning existing lists. However, simply expanding the context window often leads to context dilution, where distractors crowd out relevant information. We propose SEAL-RAG, a training-free controller that adopts a ``replace, don't expand'' strategy to fight context dilution under a fixed retrieval depth k. SEAL executes a (Search rightarrow Extract rightarrow Assess rightarrow Loop) cycle: it performs on-the-fly, entity-anchored extraction to build a live gap specification (missing entities/relations), triggers targeted micro-queries, and uses entity-first ranking to actively swap out distractors for gap-closing evidence. We evaluate SEAL-RAG against faithful re-implementations of Basic RAG, CRAG, Self-RAG, and Adaptive-k in a shared environment on HotpotQA and 2WikiMultiHopQA. On HotpotQA (k=3), SEAL improves answer correctness by +3--13 pp and evidence precision by +12--18 pp over Self-RAG. On 2WikiMultiHopQA (k=5), it outperforms Adaptive-k by +8.0 pp in accuracy and maintains 96\% evidence precision compared to 22\% for CRAG. These gains are statistically significant (p<0.001). By enforcing fixed-k replacement, SEAL yields a predictable cost profile while ensuring the top-k slots are optimized for precision rather than mere breadth. We release our code and data at https://github.com/mosherino/SEAL-RAG.

Retrieval-Augmented Generation (RAG) has been shown to improve knowledge capabilities and alleviate the hallucination problem of LLMs. The Web is a major source of external knowledge used in RAG systems, and many commercial systems such as ChatGPT and Perplexity have used Web search engines as their major retrieval systems. Typically, such RAG systems retrieve search results, download HTML sources of the results, and then extract plain texts from the HTML sources. Plain text documents or chunks are fed into the LLMs to augment the generation. However, much of the structural and semantic information inherent in HTML, such as headings and table structures, is lost during this plain-text-based RAG process. To alleviate this problem, we propose HtmlRAG, which uses HTML instead of plain text as the format of retrieved knowledge in RAG. We believe HTML is better than plain text in modeling knowledge in external documents, and most LLMs possess robust capacities to understand HTML. However, utilizing HTML presents new challenges. HTML contains additional content such as tags, JavaScript, and CSS specifications, which bring extra input tokens and noise to the RAG system. To address this issue, we propose HTML cleaning, compression, and pruning strategies, to shorten the HTML while minimizing the loss of information. Specifically, we design a two-step block-tree-based pruning method that prunes useless HTML blocks and keeps only the relevant part of the HTML. Experiments on six QA datasets confirm the superiority of using HTML in RAG systems.

Multi-modal retrieval augmented generation (M-RAG) is instrumental for inhibiting hallucinations in large multi-modal models (LMMs) through the use of a factual knowledge base (KB). However, M-RAG introduces new attack vectors for adversaries that aim to disrupt the system by injecting malicious entries into the KB. In this paper, we present the first poisoning attack against M-RAG targeting visual document retrieval applications where the KB contains images of document pages. We propose two attacks, each of which require injecting only a single adversarial image into the KB. Firstly, we propose a universal attack that, for any potential user query, influences the response to cause a denial-of-service (DoS) in the M-RAG system. Secondly, we present a targeted attack against one or a group of user queries, with the goal of spreading targeted misinformation. For both attacks, we use a multi-objective gradient-based adversarial approach to craft the injected image while optimizing for both retrieval and generation. We evaluate our attacks against several visual document retrieval datasets, a diverse set of state-of-the-art retrievers (embedding models) and generators (LMMs), demonstrating the attack effectiveness in both the universal and targeted settings. We additionally present results including commonly used defenses, various attack hyper-parameter settings, ablations, and attack transferability.

Despite Retrieval-Augmented Generation (RAG) has shown promising capability in leveraging external knowledge, a comprehensive evaluation of RAG systems is still challenging due to the modular nature of RAG, evaluation of long-form responses and reliability of measurements. In this paper, we propose a fine-grained evaluation framework, RAGChecker, that incorporates a suite of diagnostic metrics for both the retrieval and generation modules. Meta evaluation verifies that RAGChecker has significantly better correlations with human judgments than other evaluation metrics. Using RAGChecker, we evaluate 8 RAG systems and conduct an in-depth analysis of their performance, revealing insightful patterns and trade-offs in the design choices of RAG architectures. The metrics of RAGChecker can guide researchers and practitioners in developing more effective RAG systems.

This preprint presents an empirical analysis of byte-exact chunk-level deduplication in Retrieval-Augmented Generation (RAG) pipelines. We measure context reduction across three distinct operating regimes: clean academic retrieval (0.16% byte reduction on 22.2M BeIR passages), constructed enterprise patterns (24.03% reduction), and multi-turn conversational AI (80.34% reduction). To validate quality preservation, we conducted a cross-vendor 5-judge calibrated panel evaluation across four production APIs (Google Gemini 2.5 Flash, Anthropic Claude Sonnet 4.6, Meta Llama 3.3 70B, and OpenAI GPT-5.1). Applying a five-category human-in-the-loop noise-removal protocol to panel-majority materially different (MAT) pairs, we establish that byte-exact deduplication introduces zero measurable quality regression. Post-audit, all four vendors clear the strict <5% Wilson 95% upper-bound MAT threshold in both the clean and high-redundancy RAG regimes. This work demonstrates that substantial inference compute savings can be achieved deterministically without compromising evaluation-grade model quality.

Retrieval-Augmented Generation (RAG) has emerged as the dominant technique to provide Large Language Models (LLM) with fresh and relevant context, mitigating the risk of hallucinations and improving the overall quality of responses in environments with large and fast moving knowledge bases. However, the integration of external documents into the generation process raises significant privacy concerns. Indeed, when added to a prompt, it is not possible to guarantee a response will not inadvertently expose confidential data, leading to potential breaches of privacy and ethical dilemmas. This paper explores a practical solution to this problem suitable to general knowledge extraction from personal data. It shows differentially private token generation is a viable approach to private RAG.

The paper presents a methodology for uncovering knowledge gaps on the internet using the Retrieval Augmented Generation (RAG) model. By simulating user search behaviour, the RAG system identifies and addresses gaps in information retrieval systems. The study demonstrates the effectiveness of the RAG system in generating relevant suggestions with a consistent accuracy of 93%. The methodology can be applied in various fields such as scientific discovery, educational enhancement, research development, market analysis, search engine optimisation, and content development. The results highlight the value of identifying and understanding knowledge gaps to guide future endeavours.

RAG systems are increasingly evaluated and optimized using LLM judges, an approach that is rapidly becoming the dominant paradigm for system assessment. Nugget-based approaches in particular are now embedded not only in evaluation frameworks but also in the architectures of RAG systems themselves. While this integration can lead to genuine improvements, it also creates a risk of faulty measurements due to circularity. In this paper, we investigate this risk through comparative experiments with nugget-based RAG systems, including Ginger and Crucible, against strong baselines such as GPT-Researcher. By deliberately modifying Crucible to generate outputs optimized for an LLM judge, we show that near-perfect evaluation scores can be achieved when elements of the evaluation - such as prompt templates or gold nuggets - are leaked or can be predicted. Our results highlight the importance of blind evaluation settings and methodological diversity to guard against mistaking metric overfitting for genuine system progress.

Long-form Retrieval-Augmented Generation (RAG) brings the challenge of coverage-based ranking, because ranking methods must ensure the inclusion of comprehensive relevant nuggets (i.e., facts), which can thereby be synthesized into a comprehensive output. In this work, we propose CoveR (Our code is available at https://github.com/DylanJoo/CoveR ) a dense retrieval method optimized for coverage-aware retrieval scenarios. CoveR is a bi-encoder trained with the coverage-based contrastive and distillation objectives, which enables CoveR to capture diverse aspects of information needs. To train CoveR, we create the SCOPE dataset, (Our training data is available at https://huggingface.co/datasets/DylanJHJ/scope ) which comprises 90K training pairs from Researchy Questions with synthetic coverage signals augmented from sub-question answerability judgments generated by LLMs. Our empirical experiments show that CoveR enhances nugget coverage by 10\% over strong dense retrieval baselines without sacrificing its relevance-based retrieval capability. Further ablation studies validate the importance of our proposed learning method, showing that CoveR achieves a superior trade-off between relevance- and coverage-based ranking, which is essential for long-form RAG.

Retrieval-Augmented Generation (RAG) has attracted significant attention due to its ability to combine the generative capabilities of Large Language Models (LLMs) with knowledge obtained through efficient retrieval mechanisms over large-scale data collections. Currently, the majority of existing approaches overlook the risks associated with exposing sensitive or access-controlled information directly to the generation model. Only a few approaches propose techniques to instruct the generative model to refrain from disclosing sensitive information; however, recent studies have also demonstrated that LLMs remain vulnerable to prompt injection attacks that can override intended behavioral constraints. For these reasons, we propose a novel approach to Selective Disclosure in Retrieval-Augmented Generation, called SD-RAG, which decouples the enforcement of security and privacy constraints from the generation process itself. Rather than relying on prompt-level safeguards, SD-RAG applies sanitization and disclosure controls during the retrieval phase, prior to augmenting the language model's input. Moreover, we introduce a semantic mechanism to allow the ingestion of human-readable dynamic security and privacy constraints together with an optimized graph-based data model that supports fine-grained, policy-aware retrieval. Our experimental evaluation demonstrates the superiority of SD-RAG over baseline existing approaches, achieving up to a 58% improvement in the privacy score, while also showing a strong resilience to prompt injection attacks targeting the generative model.

Recently, Image-to-Music (I2M) generation has garnered significant attention, with potential applications in fields such as gaming, advertising, and multi-modal art creation. However, due to the ambiguous and subjective nature of I2M tasks, most end-to-end methods lack interpretability, leaving users puzzled about the generation results. Even methods based on emotion mapping face controversy, as emotion represents only a singular aspect of art. Additionally, most learning-based methods require substantial computational resources and large datasets for training, hindering accessibility for common users. To address these challenges, we propose the first Vision Language Model (VLM)-based I2M framework that offers high interpretability and low computational cost. Specifically, we utilize ABC notation to bridge the text and music modalities, enabling the VLM to generate music using natural language. We then apply multi-modal Retrieval-Augmented Generation (RAG) and self-refinement techniques to allow the VLM to produce high-quality music without external training. Furthermore, we leverage the generated motivations in text and the attention maps from the VLM to provide explanations for the generated results in both text and image modalities. To validate our method, we conduct both human studies and machine evaluations, where our method outperforms others in terms of music quality and music-image consistency, indicating promising results. Our code is available at https://github.com/RS2002/Image2Music .

Retrieval-augmented generation (RAG) enhances large language models (LLMs) with retrieved context but often suffers from downgraded prefill performance as modern applications demand longer and more complex inputs. Existing caching techniques either preserve accuracy with low cache reuse or improve reuse at the cost of degraded reasoning quality. We present RAGBoost, an efficient RAG system that achieves high cache reuse without sacrificing accuracy through accuracy-preserving context reuse. RAGBoost detects overlapping retrieved items across concurrent sessions and multi-turn interactions, using efficient context indexing, ordering, and de-duplication to maximize reuse, while lightweight contextual hints maintain reasoning fidelity. It integrates seamlessly with existing LLM inference engines and improves their prefill performance by 1.5-3X over state-of-the-art methods, while preserving or even enhancing reasoning accuracy across diverse RAG and agentic AI workloads. Our code is released at: https://github.com/Edinburgh-AgenticAI/RAGBoost.

Retrieval-augmented generation (RAG) greatly benefits language models (LMs) by providing additional context for tasks such as document-based question answering (DBQA). Despite its potential, the power of RAG is highly dependent on its configuration, raising the question: What is the optimal RAG configuration? To answer this, we introduce the RAGGED framework to analyze and optimize RAG systems. On a set of representative DBQA tasks, we study two classic sparse and dense retrievers, and four top-performing LMs in encoder-decoder and decoder-only architectures. Through RAGGED, we uncover that different models suit substantially varied RAG setups. While encoder-decoder models monotonically improve with more documents, we find decoder-only models can only effectively use < 5 documents, despite often having a longer context window. RAGGED offers further insights into LMs' context utilization habits, where we find that encoder-decoder models rely more on contexts and are thus more sensitive to retrieval quality, while decoder-only models tend to rely on knowledge memorized during training.

Successful defense against dynamically evolving cyber threats requires advanced and sophisticated techniques. This research presents a novel approach to enhance real-time cybersecurity threat detection and response by integrating large language models (LLMs) and Retrieval-Augmented Generation (RAG) systems with continuous threat intelligence feeds. Leveraging recent advancements in LLMs, specifically GPT-4o, and the innovative application of RAG techniques, our approach addresses the limitations of traditional static threat analysis by incorporating dynamic, real-time data sources. We leveraged RAG to get the latest information in real-time for threat intelligence, which is not possible in the existing GPT-4o model. We employ the Patrowl framework to automate the retrieval of diverse cybersecurity threat intelligence feeds, including Common Vulnerabilities and Exposures (CVE), Common Weakness Enumeration (CWE), Exploit Prediction Scoring System (EPSS), and Known Exploited Vulnerabilities (KEV) databases, and integrate these with the all-mpnet-base-v2 model for high-dimensional vector embeddings, stored and queried in Milvus. We demonstrate our system's efficacy through a series of case studies, revealing significant improvements in addressing recently disclosed vulnerabilities, KEVs, and high-EPSS-score CVEs compared to the baseline GPT-4o. This work not only advances the role of LLMs in cybersecurity but also establishes a robust foundation for the development of automated intelligent cyberthreat information management systems, addressing crucial gaps in current cybersecurity practices.

Retrieval-Augmented Generation (RAG) improves the accuracy and relevance of large language model outputs by incorporating knowledge retrieval. However, implementing RAG in enterprises poses challenges around data security, accuracy, scalability, and integration. This paper explores the unique requirements for enterprise RAG, surveys current approaches and limitations, and discusses potential advances in semantic search, hybrid queries, and optimized retrieval. It proposes an evaluation framework to validate enterprise RAG solutions, including quantitative testing, qualitative analysis, ablation studies, and industry case studies. This framework aims to help demonstrate the ability of purpose-built RAG architectures to deliver accuracy and relevance improvements with enterprise-grade security, compliance and integration. The paper concludes with implications for enterprise deployments, limitations, and future research directions. Close collaboration between researchers and industry partners may accelerate progress in developing and deploying retrieval-augmented generation technology.

Retrieval-Augmented Generation (RAG) enhances large language models (LLMs) by incorporating external knowledge, but its openness introduces vulnerabilities that can be exploited by poisoning attacks. Existing poisoning methods for RAG systems have limitations, such as poor generalization and lack of fluency in adversarial texts. In this paper, we propose CPA-RAG, a black-box adversarial framework that generates query-relevant texts capable of manipulating the retrieval process to induce target answers. The proposed method integrates prompt-based text generation, cross-guided optimization through multiple LLMs, and retriever-based scoring to construct high-quality adversarial samples. We conduct extensive experiments across multiple datasets and LLMs to evaluate its effectiveness. Results show that the framework achieves over 90\% attack success when the top-k retrieval setting is 5, matching white-box performance, and maintains a consistent advantage of approximately 5 percentage points across different top-k values. It also outperforms existing black-box baselines by 14.5 percentage points under various defense strategies. Furthermore, our method successfully compromises a commercial RAG system deployed on Alibaba's BaiLian platform, demonstrating its practical threat in real-world applications. These findings underscore the need for more robust and secure RAG frameworks to defend against poisoning attacks.

Retrieval-augmented generation (RAG) has become a widely recognized paradigm to combine parametric memory with non-parametric memories. An RAG model consists of two serial connecting components (retriever and generator). A major challenge in end-to-end optimization of the RAG model is that marginalization over relevant passages (modeled as discrete latent variables) from a knowledge base is required. Traditional top-K marginalization and variational RAG (VRAG) suffer from biased or high-variance gradient estimates. In this paper, we propose and develop joint stochastic approximation (JSA) based end-to-end training of RAG, which is referred to as JSA-RAG. The JSA algorithm is a stochastic extension of the EM (expectation-maximization) algorithm and is particularly powerful in estimating discrete latent variable models. Extensive experiments are conducted on five datasets for two tasks (open-domain question answering, knowledge-grounded dialogs) and show that JSA-RAG significantly outperforms both vanilla RAG and VRAG. Further analysis shows the efficacy of JSA-RAG from the perspectives of generation, retrieval, and low-variance gradient estimate.

The indexing-retrieval-generation paradigm of retrieval-augmented generation (RAG) has been highly successful in solving knowledge-intensive tasks by integrating external knowledge into large language models (LLMs). However, the incorporation of external and unverified knowledge increases the vulnerability of LLMs because attackers can perform attack tasks by manipulating knowledge. In this paper, we introduce a benchmark named SafeRAG designed to evaluate the RAG security. First, we classify attack tasks into silver noise, inter-context conflict, soft ad, and white Denial-of-Service. Next, we construct RAG security evaluation dataset (i.e., SafeRAG dataset) primarily manually for each task. We then utilize the SafeRAG dataset to simulate various attack scenarios that RAG may encounter. Experiments conducted on 14 representative RAG components demonstrate that RAG exhibits significant vulnerability to all attack tasks and even the most apparent attack task can easily bypass existing retrievers, filters, or advanced LLMs, resulting in the degradation of RAG service quality. Code is available at: https://github.com/IAAR-Shanghai/SafeRAG.

Retrieval-augmented generation (RAG) is increasingly deployed in real-world applications, where its reference-grounded design makes outputs appear trustworthy. This trust has spurred research on poisoning attacks that craft malicious content, inject it into knowledge sources, and manipulate RAG responses. However, when evaluated in practical RAG systems, existing attacks suffer from severely degraded effectiveness. This gap stems from two overlooked realities: (i) content is often processed before use, which can fragment the poison and weaken its effect, and (ii) users often do not issue the exact queries anticipated during attack design. These factors can lead practitioners to underestimate risks and develop a false sense of security. To better characterize the threat to practical systems, we present Confundo, a learning-to-poison framework that fine-tunes a large language model as a poison generator to achieve high effectiveness, robustness, and stealthiness. Confundo provides a unified framework supporting multiple attack objectives, demonstrated by manipulating factual correctness, inducing biased opinions, and triggering hallucinations. By addressing these overlooked challenges, Confundo consistently outperforms a wide range of purpose-built attacks across datasets and RAG configurations by large margins, even in the presence of defenses. Beyond exposing vulnerabilities, we also present a defensive use case that protects web content from unauthorized incorporation into RAG systems via scraping, with no impact on user experience.

Retrieval-augmented generation (RAG) has recently demonstrated considerable potential for repository-level code completion, as it integrates cross-file knowledge with in-file preceding code to provide comprehensive contexts for generation. To better understand the contribution of the retrieved cross-file contexts, we introduce a likelihood-based metric to evaluate the impact of each retrieved code chunk on the completion. Our analysis reveals that, despite retrieving numerous chunks, only a small subset positively contributes to the completion, while some chunks even degrade performance. To address this issue, we leverage this metric to construct a repository-level dataset where each retrieved chunk is labeled as positive, neutral, or negative based on its relevance to the target completion. We then propose an adaptive retrieval context filtering framework, CODEFILTER, trained on this dataset to mitigate the harmful effects of negative retrieved contexts in code completion. Extensive evaluation on the RepoEval and CrossCodeLongEval benchmarks demonstrates that CODEFILTER consistently improves completion accuracy compared to approaches without filtering operations across various tasks. Additionally, CODEFILTER significantly reduces the length of the input prompt, enhancing computational efficiency while exhibiting strong generalizability across different models. These results underscore the potential of CODEFILTER to enhance the accuracy, efficiency, and attributability of repository-level code completion.

The evaluation of Retrieval-Augmented Generation (RAG) systems typically examines retrieval quality and generation parameters like temperature in isolation, overlooking their interaction. This work presents a systematic investigation of how text perturbations (simulating noisy retrieval) interact with temperature settings across multiple LLM runs. We propose a comprehensive RAG Perturbation-Temperature Analysis Framework that subjects retrieved documents to three distinct perturbation types across varying temperature settings. Through extensive experiments on HotpotQA with both open-source and proprietary LLMs, we demonstrate that performance degradation follows distinct patterns: high-temperature settings consistently amplify vulnerability to perturbations, while certain perturbation types exhibit non-linear sensitivity across the temperature range. Our work yields three key contributions: (1) a diagnostic benchmark for assessing RAG robustness, (2) an analytical framework for quantifying perturbation-temperature interactions, and (3) practical guidelines for model selection and parameter tuning under noisy retrieval conditions.

Software engineers are increasingly adding semantic search capabilities to applications using a strategy known as Retrieval Augmented Generation (RAG). A RAG system involves finding documents that semantically match a query and then passing the documents to a large language model (LLM) such as ChatGPT to extract the right answer using an LLM. RAG systems aim to: a) reduce the problem of hallucinated responses from LLMs, b) link sources/references to generated responses, and c) remove the need for annotating documents with meta-data. However, RAG systems suffer from limitations inherent to information retrieval systems and from reliance on LLMs. In this paper, we present an experience report on the failure points of RAG systems from three case studies from separate domains: research, education, and biomedical. We share the lessons learned and present 7 failure points to consider when designing a RAG system. The two key takeaways arising from our work are: 1) validation of a RAG system is only feasible during operation, and 2) the robustness of a RAG system evolves rather than designed in at the start. We conclude with a list of potential research directions on RAG systems for the software engineering community.

Iterative retrieval-augmented generation (RAG) enables large language models to answer complex multi-hop questions, but each additional loop increases latency, costs, and the risk of introducing distracting evidence, motivating the need for an efficient stopping strategy. Existing methods either use a predetermined number of iterations or rely on confidence proxies that poorly reflect whether more retrieval will actually help. We cast iterative RAG as a finite-horizon Markov decision process and introduce Stop-RAG, a value-based controller that adaptively decides when to stop retrieving. Trained with full-width forward-view Q(λ) targets from complete trajectories, Stop-RAG learns effective stopping policies while remaining compatible with black-box APIs and existing pipelines. On multi-hop question-answering benchmarks, Stop-RAG consistently outperforms both fixed-iteration baselines and prompting-based stopping with LLMs. These results highlight adaptive stopping as a key missing component in current agentic systems, and demonstrate that value-based control can improve the accuracy of RAG systems.

Retrieval-augmented generation (RAG) provides LLMs with relevant documents. Although previous studies noted that retrieving many documents can degrade performance, they did not isolate how the quantity of documents affects performance while controlling for context length. We evaluate various language models on custom datasets derived from a multi-hop QA task. We keep the context length and position of relevant information constant while varying the number of documents, and find that increasing the document count in RAG settings poses significant challenges for LLMs. Additionally, our results indicate that processing multiple documents is a separate challenge from handling long contexts. We also make the datasets and code available: https://github.com/shaharl6000/MoreDocsSameLen .

The robustness of recent Large Language Models (LLMs) has become increasingly crucial as their applicability expands across various domains and real-world applications. Retrieval-Augmented Generation (RAG) is a promising solution for addressing the limitations of LLMs, yet existing studies on the robustness of RAG often overlook the interconnected relationships between RAG components or the potential threats prevalent in real-world databases, such as minor textual errors. In this work, we investigate two underexplored aspects when assessing the robustness of RAG: 1) vulnerability to noisy documents through low-level perturbations and 2) a holistic evaluation of RAG robustness. Furthermore, we introduce a novel attack method, the Genetic Attack on RAG (GARAG), which targets these aspects. Specifically, GARAG is designed to reveal vulnerabilities within each component and test the overall system functionality against noisy documents. We validate RAG robustness by applying our GARAG to standard QA datasets, incorporating diverse retrievers and LLMs. The experimental results show that GARAG consistently achieves high attack success rates. Also, it significantly devastates the performance of each component and their synergy, highlighting the substantial risk that minor textual inaccuracies pose in disrupting RAG systems in the real world.

Retrieval-augmented generation (RAG) is increasingly deployed in enterprise search and document-centric assistants, where responses must be grounded in long and complex source materials. In practice, verifying that generated answers faithfully reflect retrieved documents is difficult: large language models can check long contexts but are too slow and costly for interactive services, while lightweight classifiers operate within strict context limits and frequently miss evidence outside truncated passages. We present the design of a real-time verification component integrated into a production RAG pipeline that enables full-document grounding under latency constraints. The system processes documents up to 32K tokens and employs adaptive inference strategies to balance response time and verification coverage across workloads. We describe the architectural decisions, operational trade-offs, and evaluation methodology used to deploy the verifier, and show that full-context verification substantially improves detection of unsupported responses compared with truncated validation. Our experience highlights when long-context verification is necessary, why chunk-based checking often fails in real documents, and how latency budgets shape model design. These findings provide practical guidance for practitioners building reliable large-scale retrieval-augmented applications. (Model, benchmark, and code: https://huggingface.co/llm-semantic-router)

Retrieval-Augmented Generation (RAG) has emerged as a standard framework for knowledge-intensive NLP tasks, combining large language models (LLMs) with document retrieval from external corpora. Despite its widespread use, most RAG pipelines continue to treat retrieval and reasoning as isolated components, retrieving documents once and then generating answers without further interaction. This static design often limits performance on complex tasks that require iterative evidence gathering or high-precision retrieval. Recent work in both the information retrieval (IR) and NLP communities has begun to close this gap by introducing adaptive retrieval and ranking methods that incorporate feedback. In this survey, we present a structured overview of advanced retrieval and ranking mechanisms that integrate such feedback. We categorize feedback signals based on their source and role in improving the query, retrieved context, or document pool. By consolidating these developments, we aim to bridge IR and NLP perspectives and highlight retrieval as a dynamic, learnable component of end-to-end RAG systems.

Large language models (LLMs) inevitably exhibit hallucinations since the accuracy of generated texts cannot be secured solely by the parametric knowledge they encapsulate. Although retrieval-augmented generation (RAG) is a practicable complement to LLMs, it relies heavily on the relevance of retrieved documents, raising concerns about how the model behaves if retrieval goes wrong. To this end, we propose the Corrective Retrieval Augmented Generation (CRAG) to improve the robustness of generation. Specifically, a lightweight retrieval evaluator is designed to assess the overall quality of retrieved documents for a query, returning a confidence degree based on which different knowledge retrieval actions can be triggered. Since retrieval from static and limited corpora can only return sub-optimal documents, large-scale web searches are utilized as an extension for augmenting the retrieval results. Besides, a decompose-then-recompose algorithm is designed for retrieved documents to selectively focus on key information and filter out irrelevant information in them. CRAG is plug-and-play and can be seamlessly coupled with various RAG-based approaches. Experiments on four datasets covering short- and long-form generation tasks show that CRAG can significantly improve the performance of RAG-based approaches.

GUI agents powered by vision-language models (VLMs) show promise in automating complex digital tasks. However, their effectiveness in real-world applications is often limited by scarce training data and the inherent complexity of these tasks, which frequently require long-tailed knowledge covering rare, unseen scenarios. We propose RAG-GUI , a lightweight VLM that leverages web tutorials at inference time. RAG-GUI is first warm-started via supervised finetuning (SFT) and further refined through self-guided rejection sampling finetuning (RSF). Designed to be model-agnostic, RAG-GUI functions as a generic plug-in that enhances any VLM-based agent. Evaluated across three distinct tasks, it consistently outperforms baseline agents and surpasses other inference baselines by 2.6% to 13.3% across two model sizes, demonstrating strong generalization and practical plug-and-play capabilities in real-world scenarios.

Retrieval-augmented generation (RAG) has rapidly advanced the language model field, particularly in question-answering (QA) systems. By integrating external documents during the response generation phase, RAG significantly enhances the accuracy and reliability of language models. This method elevates the quality of responses and reduces the frequency of hallucinations, where the model generates incorrect or misleading information. However, these methods exhibit limited retrieval accuracy when faced with numerous indistinguishable documents, presenting notable challenges in their practical application. In response to these emerging challenges, we present HiQA, an advanced multi-document question-answering (MDQA) framework that integrates cascading metadata into content and a multi-route retrieval mechanism. We also release a benchmark called MasQA to evaluate and research in MDQA. Finally, HiQA demonstrates the state-of-the-art performance in multi-document environments.

The retrieval-augmented generation (RAG) enables retrieval of relevant information from an external knowledge source and allows large language models (LLMs) to answer queries over previously unseen document collections. However, it was demonstrated that traditional RAG applications perform poorly in answering multi-hop questions, which require retrieving and reasoning over multiple elements of supporting evidence. We introduce a new method called Multi-Meta-RAG, which uses database filtering with LLM-extracted metadata to improve the RAG selection of the relevant documents from various sources, relevant to the question. While database filtering is specific to a set of questions from a particular domain and format, we found out that Multi-Meta-RAG greatly improves the results on the MultiHop-RAG benchmark. The code is available at https://github.com/mxpoliakov/Multi-Meta-RAG.

Large Language Models (LLMs) excel in various language tasks but they often generate incorrect information, a phenomenon known as "hallucinations". Retrieval-Augmented Generation (RAG) aims to mitigate this by using document retrieval for accurate responses. However, RAG still faces hallucinations due to vague queries. This study aims to improve RAG by optimizing query generation with a query-document alignment score, refining queries using LLMs for better precision and efficiency of document retrieval. Experiments have shown that our approach improves document retrieval, resulting in an average accuracy gain of 1.6%.

The effectiveness of Retrieval-Augmented Generation (RAG) is highly dependent on how documents are chunked, that is, segmented into smaller units for indexing and retrieval. Yet, commonly used "one-size-fits-all" approaches often fail to capture the nuanced structure and semantics of diverse texts. Despite its central role, chunking lacks a dedicated evaluation framework, making it difficult to assess and compare strategies independently of downstream performance. We challenge this paradigm by introducing Adaptive Chunking, a framework that selects the most suitable chunking strategy for each document based on a set of five novel intrinsic, document-based metrics: References Completeness (RC), Intrachunk Cohesion (ICC), Document Contextual Coherence (DCC), Block Integrity (BI), and Size Compliance (SC), which directly assess chunking quality across key dimensions. To support this framework, we also introduce two new chunkers, an LLM-regex splitter and a split-then-merge recursive splitter, alongside targeted post-processing techniques. On a diverse corpus spanning legal, technical, and social science domains, our metric-guided adaptive method significantly improves downstream RAG performance. Without changing models or prompts, our framework increases RAG outcomes, raising answers correctness to 72% (from 62-64%) and increasing the number of successfully answered questions by over 30% (65 vs. 49). These results demonstrate that adaptive, document-aware chunking, guided by a complementary suite of intrinsic metrics, offers a practical and effective path to more robust RAG systems. Code available at https://github.com/ekimetrics/adaptive-chunking.

Existing research on Retrieval-Augmented Generation (RAG) primarily focuses on improving overall question-answering accuracy, often overlooking the quality of sub-claims within generated responses. Recent methods that attempt to improve RAG trustworthiness, such as through auto-evaluation metrics, lack probabilistic guarantees or require ground truth answers. To address these limitations, we propose Conformal-RAG, a novel framework inspired by recent applications of conformal prediction (CP) on large language models (LLMs). Conformal-RAG leverages CP and internal information from the RAG mechanism to offer statistical guarantees on response quality. It ensures group-conditional coverage spanning multiple sub-domains without requiring manual labelling of conformal sets, making it suitable for complex RAG applications. Compared to existing RAG auto-evaluation methods, Conformal-RAG offers statistical guarantees on the quality of refined sub-claims, ensuring response reliability without the need for ground truth answers. Additionally, our experiments demonstrate that by leveraging information from the RAG system, Conformal-RAG retains up to 60\% more high-quality sub-claims from the response compared to direct applications of CP to LLMs, while maintaining the same reliability guarantee.

Retrieval-Augmented Generation (RAG) has become the standard approach for grounding large language models in information that was not available during training. While existing datasets and benchmarks focus on web or other public sources, there is still no widely adopted dataset that realistically reflects the nature of company-internal knowledge. Meanwhile, startups, enterprises, and researchers are increasingly developing AI Agents designed to operate over exactly this kind of proprietary data. To close this gap, we release a synthetic enterprise corpus, its generation framework, and a leaderboard. We present EnterpriseRAG-Bench, a dataset consisting of approximately 500,000 documents spanning nine enterprise source types (Slack, Gmail, Linear, Google Drive, HubSpot, Fireflies, GitHub, Jira, and Confluence) and 500 questions across ten categories that test distinct retrieval and reasoning capabilities. The corpus is generated with cross-document coherence (grounded in shared projects, people, and initiatives) and augmented with realistic noise such as misfiled documents, near-duplicates, and conflicting information. The question set ranges from simple single-document lookups to multi-document reasoning, constrained retrieval, conflict resolution, and recognizing when information is absent. The generation framework lets teams generate variants tailored to their own industry, scale, and source mix. The dataset, code, evaluation harness, and leaderboard are available at https://github.com/onyx-dot-app/EnterpriseRAG-Bench.

Retrieval-Augmented Generation (RAG) helps LLMs stay accurate, but feeding long documents into a prompt makes the model slow and expensive. This has motivated context compression, ranging from token pruning and summarization to embedding-based compression. While researchers have tried ''compressing'' these documents into smaller summaries or mathematical embeddings, there is a catch: the more you compress the data, the more the LLM struggles to understand it. To address this challenge, we propose ArcAligner (Adaptive recursive context *Aligner*), a lightweight module integrated into the language model layers to help the model better utilize highly compressed context representations for downstream generation. It uses an adaptive ''gating'' system that only adds extra processing power when the information is complex, keeping the system fast. Across knowledge-intensive QA benchmarks, ArcAligner consistently beats compression baselines at comparable compression rates, especially on multi-hop and long-tail settings. The source code is publicly available.

Retrieval-Augmented Generation (RAG) is a critical paradigm for building reliable, knowledge-intensive Large Language Model (LLM) applications. However, the multi-stage pipeline (retrieve, generate) and unique workload characteristics (e.g., knowledge dependency) of RAG systems pose significant challenges for serving performance optimization. Existing generic LLM inference traces fail to capture these RAG-specific dynamics, creating a significant performance gap between academic research and real-world deployment. To bridge this gap, this paper introduces RAGPulse, an open-source RAG workload trace dataset. This dataset was collected from an university-wide Q&A system serving that has served more than 40,000 students and faculties since April 2024. We detail RAGPulse's system architecture, its privacy-preserving hash-based data format, and provide an in-depth statistical analysis. Our analysis reveals that real-world RAG workloads exhibit significant temporal locality and a highly skewed hot document access pattern. RAGPulse provides a high-fidelity foundation for researchers to develop and validate novel optimization strategies for RAG systems, such as content-aware batching and retrieval caching, ultimately enhancing the efficiency and reliability of RAG services. The code is available at https://github.com/flashserve/RAGPulse.

While holding great promise for improving and facilitating healthcare, large language models (LLMs) struggle to produce up-to-date responses on evolving topics due to outdated knowledge or hallucination. Retrieval-augmented generation (RAG) is a pivotal innovation that improves the accuracy and relevance of LLM responses by integrating LLMs with a search engine and external sources of knowledge. However, the quality of RAG responses can be largely impacted by the rank and density of key information in the retrieval results, such as the "lost-in-the-middle" problem. In this work, we aim to improve the robustness and reliability of the RAG workflow in the medical domain. Specifically, we propose a map-reduce strategy, BriefContext, to combat the "lost-in-the-middle" issue without modifying the model weights. We demonstrated the advantage of the workflow with various LLM backbones and on multiple QA datasets. This method promises to improve the safety and reliability of LLMs deployed in healthcare domains.

Retrieval-Augmented Generation (RAG) systems face challenges with complex, multihop questions, and agentic frameworks such as Search-R1 (Jin et al., 2025), which operates iteratively, have been proposed to address these complexities. However, such approaches can introduce inefficiencies, including repetitive retrieval of previously processed information and challenges in contextualizing retrieved results effectively within the current generation prompt. Such issues can lead to unnecessary retrieval turns, suboptimal reasoning, inaccurate answers, and increased token consumption. In this paper, we investigate test-time modifications to the Search-R1 pipeline to mitigate these identified shortcomings. Specifically, we explore the integration of two components and their combination: a contextualization module to better integrate relevant information from retrieved documents into reasoning, and a de-duplication module that replaces previously retrieved documents with the next most relevant ones. We evaluate our approaches using the HotpotQA (Yang et al., 2018) and the Natural Questions (Kwiatkowski et al., 2019) datasets, reporting the exact match (EM) score, an LLM-as-a-Judge assessment of answer correctness, and the average number of turns. Our best-performing variant, utilizing GPT-4.1-mini for contextualization, achieves a 5.6% increase in EM score and reduces the number of turns by 10.5% compared to the Search-R1 baseline, demonstrating improved answer accuracy and retrieval efficiency.

Retrieval-Augmented Generation (RAG) is a promising approach for mitigating the hallucination of large language models (LLMs). However, existing research lacks rigorous evaluation of the impact of retrieval-augmented generation on different large language models, which make it challenging to identify the potential bottlenecks in the capabilities of RAG for different LLMs. In this paper, we systematically investigate the impact of Retrieval-Augmented Generation on large language models. We analyze the performance of different large language models in 4 fundamental abilities required for RAG, including noise robustness, negative rejection, information integration, and counterfactual robustness. To this end, we establish Retrieval-Augmented Generation Benchmark (RGB), a new corpus for RAG evaluation in both English and Chinese. RGB divides the instances within the benchmark into 4 separate testbeds based on the aforementioned fundamental abilities required to resolve the case. Then we evaluate 6 representative LLMs on RGB to diagnose the challenges of current LLMs when applying RAG. Evaluation reveals that while LLMs exhibit a certain degree of noise robustness, they still struggle significantly in terms of negative rejection, information integration, and dealing with false information. The aforementioned assessment outcomes indicate that there is still a considerable journey ahead to effectively apply RAG to LLMs.

With the increasing adoption of Large Language Models (LLMs) and Vision-Language Models (VLMs), rich document analysis technologies for applications like Retrieval-Augmented Generation (RAG) and visual RAG are gaining significant attention. Recent research indicates that using VLMs can achieve better RAG performance, but processing rich documents still remains a challenge since a single page contains large amounts of information. In this paper, we present SCAN (SemantiC Document Layout ANalysis), a novel approach enhancing both textual and visual Retrieval-Augmented Generation (RAG) systems working with visually rich documents. It is a VLM-friendly approach that identifies document components with appropriate semantic granularity, balancing context preservation with processing efficiency. SCAN uses a coarse-grained semantic approach that divides documents into coherent regions covering continuous components. We trained the SCAN model by fine-tuning object detection models with sophisticated annotation datasets. Our experimental results across English and Japanese datasets demonstrate that applying SCAN improves end-to-end textual RAG performance by up to 9.0\% and visual RAG performance by up to 6.4\%, outperforming conventional approaches and even commercial document processing solutions.

Retrieval-Augmented Generation (RAG) enhances large language models (LLMs) by integrating up-to-date external knowledge, yet real-world web environments present unique challenges. These limitations manifest as two key challenges: pervasive misinformation in the web environment, which introduces unreliable or misleading content that can degrade retrieval accuracy, and the underutilization of web tools, which, if effectively employed, could enhance query precision and help mitigate this noise, ultimately improving the retrieval results in RAG systems. To address these issues, we propose WebFilter, a novel RAG framework that generates source-restricted queries and filters out unreliable content. This approach combines a retrieval filtering mechanism with a behavior- and outcome-driven reward strategy, optimizing both query formulation and retrieval outcomes. Extensive experiments demonstrate that WebFilter improves answer quality and retrieval precision, outperforming existing RAG methods on both in-domain and out-of-domain benchmarks.

RAG (Retrieval Augmented Generation) allows LLMs (large language models) to generate better responses with external knowledge, but using more external knowledge often improves generation quality at the expense of response delay. Prior work either reduces the response delay (through better scheduling of RAG queries) or strives to maximize quality (which involves tuning the RAG workflow), but they fall short in optimizing the tradeoff between the delay and quality of RAG responses. This paper presents RAGServe, the first RAG system that jointly schedules queries and adapts the key RAG configurations of each query, such as the number of retrieved text chunks and synthesis methods, in order to balance quality optimization and response delay reduction. Using 4 popular RAG-QA datasets, we show that compared with the state-of-the-art RAG optimization schemes, RAGServe reduces the generation latency by 1.64-2.54times without sacrificing generation quality.

This paper presents an experience report on the development of Retrieval Augmented Generation (RAG) systems using PDF documents as the primary data source. The RAG architecture combines generative capabilities of Large Language Models (LLMs) with the precision of information retrieval. This approach has the potential to redefine how we interact with and augment both structured and unstructured knowledge in generative models to enhance transparency, accuracy, and contextuality of responses. The paper details the end-to-end pipeline, from data collection, preprocessing, to retrieval indexing and response generation, highlighting technical challenges and practical solutions. We aim to offer insights to researchers and practitioners developing similar systems using two distinct approaches: OpenAI's Assistant API with GPT Series and Llama's open-source models. The practical implications of this research lie in enhancing the reliability of generative AI systems in various sectors where domain-specific knowledge and real-time information retrieval is important. The Python code used in this work is also available at: https://github.com/GPT-Laboratory/RAG-LLM-Development-Guidebook-from-PDFs.

The application of Large Language Models (LLMs) and Retrieval-Augmented Generation (RAG) systems in the telecommunication domain presents unique challenges, primarily due to the complex nature of telecom standard documents and the rapid evolution of the field. The paper introduces Telco-RAG, an open-source RAG framework designed to handle the specific needs of telecommunications standards, particularly 3rd Generation Partnership Project (3GPP) documents. Telco-RAG addresses the critical challenges of implementing a RAG pipeline on highly technical content, paving the way for applying LLMs in telecommunications and offering guidelines for RAG implementation in other technical domains.

Retrieval-Augmented Generation (RAG) lets a large language model answer questions using documents retrieved from an external knowledge base at query time. This makes RAG useful for private data, fast-changing information, and reducing hallucination, but it also means the model's answer is only as trustworthy as whatever the retriever hands it. If the knowledge base accepts writes from more than one party, an attacker needs only a handful of adversarial documents to steer the model toward a chosen wrong answer. PoisonedRAG demonstrated this: as few as five crafted documents flip an undefended system's answer roughly 90% of the time, and three natural single-stage defenses (perplexity filtering, query paraphrasing, knowledge-base expansion) leave attack success at 30% or higher. We built TriShieldRAG to close that gap. Rather than relying on one checkpoint, we place three independent, formally specified rings across the pipeline: an Ingest Guard that screens documents for lexical and statistical poisoning signatures; a Retrieval Scorer that re-ranks the retrieved set by a provenance and consistency-weighted trust score; and a Cross-LLM Consensus stage that polls three architecturally diverse language models (Claude, Mistral Small, Llama 3.2) and allows one bounded re-retrieval on disagreement. We derive the conditions under which Rings 2 and 3 are expected to work: a minority-poison assumption and an explicit provenance-tag assumption. Our reported configuration is consistent with this analysis, though we have not yet run the controlled poison-fraction sweep needed to confirm it independently. Evaluated against the non-adaptive attacker from the original PoisonedRAG, over a 5,000-document Wikipedia knowledge base with 10 target questions, the full pipeline reduces attack success rate from roughly 91% to roughly 13% while preserving accuracy on benign queries.

Retrieval-Augmented Generation (RAG) has established itself as the standard paradigm for grounding Large Language Models (LLMs) in domain-specific, up-to-date data. However, the prevailing architecture for RAG has evolved into a complex, distributed stack requiring cloud-hosted vector databases, heavy deep learning frameworks (e.g., PyTorch, CUDA), and high-latency embedding inference servers. This ``infrastructure bloat'' creates a significant barrier to entry for edge computing, air-gapped environments, and privacy-constrained applications where data sovereignty is paramount. This paper introduces RAGdb, a novel monolithic architecture that consolidates automated multimodal ingestion, ONNX-based extraction, and hybrid vector retrieval into a single, portable SQLite container. We propose a deterministic Hybrid Scoring Function (HSF) that combines sublinear TF-IDF vectorization with exact substring boosting, eliminating the need for GPU inference at query time. Experimental evaluation on an Intel i7-1165G7 consumer laptop demonstrates that RAGdb achieves 100\% Recall@1 for entity retrieval and an ingestion efficiency gain of 31.6x during incremental updates compared to cold starts. Furthermore, the system reduces disk footprint by approximately 99.5\% compared to standard Docker-based RAG stacks, establishing the ``Single-File Knowledge Container'' as a viable primitive for decentralized, local-first AI. Keywords: Edge AI, Retrieval-Augmented Generation, Vector Search, Green AI, Serverless Architecture, Knowledge Graphs, Efficient Computing.

Retrieval-Augmented Generation (RAG) enhances coding tasks by incorporating retrieved code examples into prompts. However, lengthy prompts, often exceeding tens of thousands of tokens, introduce challenges related to limited context windows of language models (LMs) and high computational costs. Existing prompt compression techniques focus on natural language, lacking tailored solutions for code. To address the gap, we propose CodePromptZip, a framework that compresses code examples before integrating into RAG workflows. Our framework employs a type-aware, priority-driven strategy to construct training samples for training code compression model. By using program analysis, we identify token types (e.g., Identifier) and perform ablation analysis to rank their removal priorities based on their impact on task performance. We then train a small LM as the compressor on these samples, enabling flexible compression conditioned on specified ratios while minimizing performance degradation. Specially, the compressor is augmented with a copy mechanism, allowing tokens to be directly copied from the original code snippets. Evaluation results show that CodePromptZip surpasses SOTA entropy-based and distillation-based baselines, improving by 23.4%, 28.7%, and 8.7% over the best baseline for Assertion Generation, Bugs2Fix, and Code Suggestion, respectively.

With the advent of Large Language Models (LLMs), the potential of Retrieval Augmented Generation (RAG) techniques have garnered considerable research attention. Numerous novel algorithms and models have been introduced to enhance various aspects of RAG systems. However, the absence of a standardized framework for implementation, coupled with the inherently intricate RAG process, makes it challenging and time-consuming for researchers to compare and evaluate these approaches in a consistent environment. Existing RAG toolkits like LangChain and LlamaIndex, while available, are often heavy and unwieldy, failing to meet the personalized needs of researchers. In response to this challenge, we propose FlashRAG, an efficient and modular open-source toolkit designed to assist researchers in reproducing existing RAG methods and in developing their own RAG algorithms within a unified framework. Our toolkit implements 12 advanced RAG methods and has gathered and organized 32 benchmark datasets. Our toolkit has various features, including customizable modular framework, rich collection of pre-implemented RAG works, comprehensive datasets, efficient auxiliary pre-processing scripts, and extensive and standard evaluation metrics. Our toolkit and resources are available at https://github.com/RUC-NLPIR/FlashRAG.

Retrieval-augmented generation (RAG) is a common way to ground language models in external documents and up-to-date information. Classical retrieval systems relied on lexical methods such as BM25, which rank documents by term overlap with corpus-level weighting. End-to-end multimodal retrievers trained on large query-document datasets claim substantial improvements over these approaches, especially for multilingual documents with complex visual layouts. We demonstrate that better document representation is the primary driver of benchmark improvements. By systematically varying transcription and preprocessing methods while holding the retrieval mechanism fixed, we demonstrate that BM25 can recover large gaps on multilingual and visual benchmarks. Our findings call for decomposed evaluation benchmarks that separately measure transcription and retrieval capabilities, enabling the field to correctly attribute progress and focus effort where it matters.

Retrieval-augmented generation (RAG) enhances large language models (LLMs) with external knowledge but incurs significant inference costs due to lengthy retrieved contexts. While context compression mitigates this issue, existing methods apply fixed compression rates, over-compressing simple queries or under-compressing complex ones. We propose Adaptive Context Compression for RAG (ACC-RAG), a framework that dynamically adjusts compression rates based on input complexity, optimizing inference efficiency without sacrificing accuracy. ACC-RAG combines a hierarchical compressor (for multi-granular embeddings) with a context selector to retain minimal sufficient information, akin to human skimming. Evaluated on Wikipedia and five QA datasets, ACC-RAG outperforms fixed-rate methods and matches/unlocks over 4 times faster inference versus standard RAG while maintaining or improving accuracy.

Recent advancements in large language models (LLMs) and multi-modal LLMs have been remarkable. However, these models still rely solely on their parametric knowledge, which limits their ability to generate up-to-date information and increases the risk of producing erroneous content. Retrieval-Augmented Generation (RAG) partially mitigates these challenges by incorporating external data sources, yet the reliance on databases and retrieval systems can introduce irrelevant or inaccurate documents, ultimately undermining both performance and reasoning quality. In this paper, we propose Multi-Modal Knowledge-Based Retrieval-Augmented Generation (MMKB-RAG), a novel multi-modal RAG framework that leverages the inherent knowledge boundaries of models to dynamically generate semantic tags for the retrieval process. This strategy enables the joint filtering of retrieved documents, retaining only the most relevant and accurate references. Extensive experiments on knowledge-based visual question-answering tasks demonstrate the efficacy of our approach: on the E-VQA dataset, our method improves performance by +4.2% on the Single-Hop subset and +0.4% on the full dataset, while on the InfoSeek dataset, it achieves gains of +7.8% on the Unseen-Q subset, +8.2% on the Unseen-E subset, and +8.1% on the full dataset. These results highlight significant enhancements in both accuracy and robustness over the current state-of-the-art MLLM and RAG frameworks.

RAG has emerged as a key technique for enhancing response quality of LLMs without high computational cost. In traditional architectures, RAG services are provided by a single entity that hosts the dataset within a trusted local environment. However, individuals or small organizations often lack the resources to maintain data storage servers, leading them to rely on outsourced cloud storage. This dependence on untrusted third-party services introduces privacy risks. Embedding-based retrieval mechanisms, commonly used in RAG systems, are vulnerable to privacy leakage such as vector-to-text reconstruction attacks and structural leakage via vector analysis. Several privacy-preserving RAG techniques have been proposed but most existing approaches rely on partially homomorphic encryption, which incurs substantial computational overhead. To address these challenges, we propose an efficient privacy-preserving RAG framework (ppRAG) tailored for untrusted cloud environments that defends against vector-to-text attack, vector analysis, and query analysis. We propose Conditional Approximate Distance-Comparison-Preserving Symmetric Encryption (CAPRISE) that encrypts embeddings while still allowing the cloud to compute similarity between an encrypted query and the encrypted database embeddings. CAPRISE preserves only the relative distance ordering between the encrypted query and each encrypted database embedding, without exposing inter-database distances, thereby enhancing both privacy and efficiency. To mitigate query analysis, we introduce DP by perturbing the query embedding prior to encryption, preventing the cloud from inferring sensitive patterns. Experimental results show that ppRAG achieves efficient processing throughput, high retrieval accuracy, strong privacy guarantees, making it a practical solution for resource-constrained users seeking secure cloud-augmented LLMs.

Retrieval-augmented Generation (RAG) extends large language models (LLMs) with external knowledge but faces key challenges: restricted effective context length and redundancy in retrieved documents. Pure compression-based approaches reduce input size but often discard fine-grained details essential for factual accuracy. We propose SARA, a unified RAG framework that balances local precision and global knowledge coverage under tight context budgets. SARA combines natural-language text snippets with semantic compression vectors to jointly enhance context efficiency and answer correctness. It represents contexts at two complementary levels: 1) fine-grained natural-language spans that preserve critical entities and numerical values, and 2) compact, interpretable vectors that summarize high-level semantics. An iterative evidence-selection module employs the compression vectors for dynamic reranking of contexts. Across 9 datasets and 5 open-source LLMs spanning 3 model families (Mistral, Llama, and Gemma), SARA consistently improves answer relevance (+17.71), answer correctness (+13.72), and semantic similarity (+15.53), demonstrating the importance of integrating textual and compressed representations for robust, context-efficient RAG.

Recent advances in Retrieval-Augmented Generation (RAG) systems have popularized semantic chunking, which aims to improve retrieval performance by dividing documents into semantically coherent segments. Despite its growing adoption, the actual benefits over simpler fixed-size chunking, where documents are split into consecutive, fixed-size segments, remain unclear. This study systematically evaluates the effectiveness of semantic chunking using three common retrieval-related tasks: document retrieval, evidence retrieval, and retrieval-based answer generation. The results show that the computational costs associated with semantic chunking are not justified by consistent performance gains. These findings challenge the previous assumptions about semantic chunking and highlight the need for more efficient chunking strategies in RAG systems.

Retrieval-Augmented Generation (RAG) frameworks aim to enhance Code Language Models (CLMs) by including another module for retrieving relevant context to construct the input prompt. However, these retrieval modules commonly use semantic search, requiring substantial computational resources for training and hosting these embedded models, making them infeasible to integrate into lightweight applications such as in-IDE AI-based code completion. In this solution paper, we prove that using keyword-search is sufficient to retrieve relevant and useful code context inside large codebases, without the need for extensive GPU resources. The usefulness of code contexts found by our solution is demonstrated through their completion results on the Code Context Competition's benchmark, reaching 0.748 and 0.725 chRF scores on Kotlin and Python tracks, respectively.

Traditional Retrieval-Augmented Generation (RAG) methods are limited by their reliance on a fixed number of retrieved documents, often resulting in incomplete or noisy information that undermines task performance. Although recent adaptive approaches alleviated these problems, their application in intricate and real-world multimodal tasks remains limited. To address these, we propose a new approach called Self-adaptive Multimodal Retrieval-Augmented Generation (SAM-RAG), tailored specifically for multimodal contexts. SAM-RAG not only dynamically filters relevant documents based on the input query, including image captions when needed, but also verifies the quality of both the retrieved documents and the output. Extensive experimental results show that SAM-RAG surpasses existing state-of-the-art methods in both retrieval accuracy and response generation. By further ablation experiments and effectiveness analysis, SAM-RAG maintains high recall quality while improving overall task performance in multimodal RAG task. Our codes are available at https://github.com/SAM-RAG/SAM_RAG.

Retrieval Augmented Generation (RAG) has become one of the most popular paradigms for enabling LLMs to access external data, and also as a mechanism for grounding to mitigate against hallucinations. When implementing RAG you can face several challenges like effective integration of retrieval models, efficient representation learning, data diversity, computational efficiency optimization, evaluation, and quality of text generation. Given all these challenges, every day a new technique to improve RAG appears, making it unfeasible to experiment with all combinations for your problem. In this context, this paper presents good practices to implement, optimize, and evaluate RAG for the Brazilian Portuguese language, focusing on the establishment of a simple pipeline for inference and experiments. We explored a diverse set of methods to answer questions about the first Harry Potter book. To generate the answers we used the OpenAI's gpt-4, gpt-4-1106-preview, gpt-3.5-turbo-1106, and Google's Gemini Pro. Focusing on the quality of the retriever, our approach achieved an improvement of MRR@10 by 35.4% compared to the baseline. When optimizing the input size in the application, we observed that it is possible to further enhance it by 2.4%. Finally, we present the complete architecture of the RAG with our recommendations. As result, we moved from a baseline of 57.88% to a maximum relative score of 98.61%.

Retrieval-Augmented Generation (RAG) utilizes external knowledge to augment Large Language Models' (LLMs) reliability. For flexibility, agentic RAG employs autonomous, multi-round retrieval and reasoning to resolve queries. Although recent agentic RAG has improved via reinforcement learning, they often incur substantial token overhead from search and reasoning processes. This trade-off prioritizes accuracy over efficiency. To address this issue, this work proposes TeaRAG, a token-efficient agentic RAG framework capable of compressing both retrieval content and reasoning steps. 1) First, the retrieved content is compressed by augmenting chunk-based semantic retrieval with a graph retrieval using concise triplets. A knowledge association graph is then built from semantic similarity and co-occurrence. Finally, Personalized PageRank is leveraged to highlight key knowledge within this graph, reducing the number of tokens per retrieval. 2) Besides, to reduce reasoning steps, Iterative Process-aware Direct Preference Optimization (IP-DPO) is proposed. Specifically, our reward function evaluates the knowledge sufficiency by a knowledge matching mechanism, while penalizing excessive reasoning steps. This design can produce high-quality preference-pair datasets, supporting iterative DPO to improve reasoning conciseness. Across six datasets, TeaRAG improves the average Exact Match by 4% and 2% while reducing output tokens by 61% and 59% on Llama3-8B-Instruct and Qwen2.5-14B-Instruct, respectively. Code is available at https://github.com/Applied-Machine-Learning-Lab/TeaRAG.

Retrieval-Augmented Generation (RAG) has significantly enhanced large language models (LLMs) in knowledge-intensive tasks by incorporating external knowledge retrieval. However, existing RAG frameworks primarily rely on semantic similarity and correlation-driven retrieval, limiting their ability to distinguish true causal relationships from spurious associations. This results in responses that may be factually grounded but fail to establish cause-and-effect mechanisms, leading to incomplete or misleading insights. To address this issue, we introduce Causal Dynamic Feedback for Adaptive Retrieval-Augmented Generation (CDF-RAG), a framework designed to improve causal consistency, factual accuracy, and explainability in generative reasoning. CDF-RAG iteratively refines queries, retrieves structured causal graphs, and enables multi-hop causal reasoning across interconnected knowledge sources. Additionally, it validates responses against causal pathways, ensuring logically coherent and factually grounded outputs. We evaluate CDF-RAG on four diverse datasets, demonstrating its ability to improve response accuracy and causal correctness over existing RAG-based methods. Our code is publicly available at https://github.com/ elakhatibi/CDF-RAG.

Retrieval Augmented Generation (RAG) has emerged as a standard paradigm for enhancing the factual accuracy and contextual relevance of Large Language Models (LLMs) by integrating retrieval mechanisms. However, existing evaluation frameworks fail to provide a holistic black-box approach to assessing RAG systems, especially in real-world deployment scenarios. To address this gap, we introduce SCARF (System for Comprehensive Assessment of RAG Frameworks), a modular and flexible evaluation framework designed to benchmark deployed RAG applications systematically. SCARF provides an end-to-end, black-box evaluation methodology, enabling a limited-effort comparison across diverse RAG frameworks. Our framework supports multiple deployment configurations and facilitates automated testing across vector databases and LLM serving strategies, producing a detailed performance report. Moreover, SCARF integrates practical considerations such as response coherence, providing a scalable and adaptable solution for researchers and industry professionals evaluating RAG applications. Using the REST APIs interface, we demonstrate how SCARF can be applied to real-world scenarios, showcasing its flexibility in assessing different RAG frameworks and configurations. SCARF is available at GitHub repository.

Stealing attacks pose a persistent threat to the intellectual property of deployed machine-learning systems. Retrieval-augmented generation (RAG) intensifies this risk by extending the attack surface beyond model weights to knowledge base that often contains IP-bearing assets such as proprietary runbooks, curated domain collections, or licensed documents. Recent work shows that multi-turn questioning can gradually steal corpus content from RAG systems, yet existing attacks are largely heuristic and often plateau early. We address this gap by formulating RAG knowledge-base stealing as an adaptive stochastic coverage problem (ASCP), where each query is a stochastic action and the goal is to maximize the conditional expected marginal gain (CMG) in corpus coverage under a query budget. Bridging ASCP to real-world black-box RAG knowledge-base stealing raises three challenges: CMG is unobservable, the natural-language action space is intractably large, and feasibility constraints require stealthy queries that remain effective under diverse architectures. We introduce RAGCrawler, a knowledge graph-guided attacker that maintains a global attacker-side state to estimate coverage gains, schedule high-value semantic anchors, and generate non-redundant natural queries. Across four corpora and four generators with BGE retriever, RAGCrawler achieves 66.8% average coverage (up to 84.4%) within 1,000 queries, improving coverage by 44.90% relative to the strongest baseline. It also reduces the queries needed to reach 70% coverage by at least 4.03x on average and enables surrogate reconstruction with answer similarity up to 0.699. Our attack is also scalable to retriever switching and newer RAG techniques like query rewriting and multi-query retrieval. These results highlight urgent needs to protect RAG knowledge assets.

Retrieval-augmented generation (RAG) has emerged as a leading approach to reducing hallucinations in large language models (LLMs). Current RAG evaluation benchmarks primarily focus on what we call local RAG: retrieving relevant chunks from a small subset of documents to answer queries that require only localized understanding within specific text chunks. However, many real-world applications require a fundamentally different capability -- global RAG -- which involves aggregating and analyzing information across entire document collections to derive corpus-level insights (for example, "What are the top 10 most cited papers in 2023?"). In this paper, we introduce GlobalQA -- the first benchmark specifically designed to evaluate global RAG capabilities, covering four core task types: counting, extremum queries, sorting, and top-k extraction. Through systematic evaluation across different models and baselines, we find that existing RAG methods perform poorly on global tasks, with the strongest baseline achieving only 1.51 F1 score. To address these challenges, we propose GlobalRAG, a multi-tool collaborative framework that preserves structural coherence through chunk-level retrieval, incorporates LLM-driven intelligent filters to eliminate noisy documents, and integrates aggregation modules for precise symbolic computation. On the Qwen2.5-14B model, GlobalRAG achieves 6.63 F1 compared to the strongest baseline's 1.51 F1, validating the effectiveness of our method.

Retrieval-Augmented Generation (RAG) is essential for integrating external knowledge into Large Language Model (LLM) outputs. While the literature on RAG is growing, it primarily focuses on systematic reviews and comparisons of new state-of-the-art (SoTA) techniques against their predecessors, with a gap in extensive experimental comparisons. This study begins to address this gap by assessing various RAG methods' impacts on retrieval precision and answer similarity. We found that Hypothetical Document Embedding (HyDE) and LLM reranking significantly enhance retrieval precision. However, Maximal Marginal Relevance (MMR) and Cohere rerank did not exhibit notable advantages over a baseline Naive RAG system, and Multi-query approaches underperformed. Sentence Window Retrieval emerged as the most effective for retrieval precision, despite its variable performance on answer similarity. The study confirms the potential of the Document Summary Index as a competent retrieval approach. All resources related to this research are publicly accessible for further investigation through our GitHub repository ARAGOG (https://github.com/predlico/ARAGOG). We welcome the community to further this exploratory study in RAG systems.

Retrieval-augmented generation (RAG) has become a fundamental paradigm for addressing the challenges faced by large language models in handling real-time information and domain-specific problems. Traditional RAG systems primarily rely on the in-context learning (ICL) capabilities of the large language model itself. Still, in-depth research on the specific capabilities needed by the RAG generation model is lacking, leading to challenges with inconsistent document quality and retrieval system imperfections. Even the limited studies that fine-tune RAG generative models often lack a granular focus on RAG task or a deeper utilization of chain-of-thought processes. To address this, we propose that RAG models should possess three progressively hierarchical abilities (1) Filtering: the ability to select relevant information; (2) Combination: the ability to combine semantic information across paragraphs; and (3) RAG-specific reasoning: the ability to further process external knowledge using internal knowledge. Thus, we introduce our new RAG instruction fine-tuning method, Hierarchical-Thought Instruction-Tuning Retrieval-Augmented Generation (HIRAG) incorporates a "think before answering" strategy. This method enhances the model's open-book examination capability by utilizing multi-level progressive chain-of-thought. Experiments show that the HIRAG training strategy significantly improves the model's performance on datasets such as RGB, PopQA, MuSiQue, HotpotQA, and PubmedQA.

The advent of Large Language Models (LLMs) has revolutionized natural language processing. However, these models face challenges in retrieving precise information from vast datasets. Retrieval-Augmented Generation (RAG) was developed to combining LLMs with external information retrieval systems to enhance the accuracy and context of responses. Despite improvements, RAG still struggles with comprehensive retrieval in high-volume, low-information-density databases and lacks relational awareness, leading to fragmented answers. To address this, this paper introduces the Pseudo-Knowledge Graph (PKG) framework, designed to overcome these limitations by integrating Meta-path Retrieval, In-graph Text and Vector Retrieval into LLMs. By preserving natural language text and leveraging various retrieval techniques, the PKG offers a richer knowledge representation and improves accuracy in information retrieval. Extensive evaluations using Open Compass and MultiHop-RAG benchmarks demonstrate the framework's effectiveness in managing large volumes of data and complex relationships.

Retrieval Augmented Generation (RAG) expands the capabilities of modern large language models (LLMs) in chatbot applications, enabling developers to adapt and personalize the LLM output without expensive training or fine-tuning. RAG systems use an external knowledge database to retrieve the most relevant documents for a given query, providing this context to the LLM generator. While RAG achieves impressive utility in many applications, its adoption to enable personalized generative models introduces new security risks. In this work, we propose new attack surfaces for an adversary to compromise a victim's RAG system, by injecting a single malicious document in its knowledge database. We design Phantom, general two-step attack framework against RAG augmented LLMs. The first step involves crafting a poisoned document designed to be retrieved by the RAG system within the top-k results only when an adversarial trigger, a specific sequence of words acting as backdoor, is present in the victim's queries. In the second step, a specially crafted adversarial string within the poisoned document triggers various adversarial attacks in the LLM generator, including denial of service, reputation damage, privacy violations, and harmful behaviors. We demonstrate our attacks on multiple LLM architectures, including Gemma, Vicuna, and Llama.

We introduce RAGAs (Retrieval Augmented Generation Assessment), a framework for reference-free evaluation of Retrieval Augmented Generation (RAG) pipelines. RAG systems are composed of a retrieval and an LLM based generation module, and provide LLMs with knowledge from a reference textual database, which enables them to act as a natural language layer between a user and textual databases, reducing the risk of hallucinations. Evaluating RAG architectures is, however, challenging because there are several dimensions to consider: the ability of the retrieval system to identify relevant and focused context passages, the ability of the LLM to exploit such passages in a faithful way, or the quality of the generation itself. With RAGAs, we put forward a suite of metrics which can be used to evaluate these different dimensions without having to rely on ground truth human annotations. We posit that such a framework can crucially contribute to faster evaluation cycles of RAG architectures, which is especially important given the fast adoption of LLMs.

Retrieval-Augmented Generation (RAG) has emerged as a reliable external knowledge augmentation technique to mitigate hallucination issues and parameterized knowledge limitations in Large Language Models (LLMs). Existing adaptive RAG (ARAG) systems excel at in-depth exploration within a single source but struggle to effectively and controllably explore different retrieval sources, as they fail to foresee their internal knowledge features. We develop a novel multi-source ARAG system, PrefRAG, which enhances RAG by enabling in-depth and controllable exploration of diverse retrieval sources through preference-driven adaptive retrieval and self-reflection. PrefRAG first fully explores controllable local sources in adaptive retrieval and supplements with the web when appropriate, ultimately selecting the optimal source for knowledge observation. Subsequently, PrefRAG feeds answer quality feedback into the retrieval process, optimizing it from the generation perspective to produce higher-quality responses. Extensive experiments confirm its superiority, high retrieval efficiency, and knowledge controllability. PrefRAG outperforms Vanilla RAG and the leading MS-ARAG by up to 25.6% and 13.9% respectively. Additionally, PrefRAG trained with DPO achieves higher performance. The code and data are available at https://github.com/QingFei1/PrefRAG.git.

Clinical LLMs are often scaled by increasing model size, context length, retrieval complexity, or inference-time compute, with the implicit expectation that higher accuracy implies safer behavior. This assumption is incomplete in medicine, where a few confident, high-risk, or evidence-contradicting errors can matter more than average benchmark performance. We introduce SaFE-Scale, a framework for measuring how clinical LLM safety changes across model scale, evidence quality, retrieval strategy, context exposure, and inference-time compute. To instantiate this framework, we introduce RadSaFE-200, a Radiology Safety-Focused Evaluation benchmark of 200 multiple-choice questions with clinician-defined clean evidence, conflict evidence, and option-level labels for high-risk error, unsafe answer, and evidence contradiction. We evaluated 34 locally deployed LLMs across six deployment conditions: closed-book prompting (zero-shot), clean evidence, conflict evidence, standard RAG, agentic RAG, and max-context prompting. Clean evidence produced the strongest improvement, increasing mean accuracy from 73.5% to 94.1%, while reducing high-risk error from 12.0% to 2.6%, contradiction from 12.7% to 2.3%, and dangerous overconfidence from 8.0% to 1.6%. Standard RAG and agentic RAG did not reproduce this safety profile: agentic RAG improved accuracy over standard RAG and reduced contradiction, but high-risk error and dangerous overconfidence remained elevated. Max-context prompting increased latency without closing the safety gap, and additional inference-time compute produced only limited gains. Worst-case analysis showed that clinically consequential errors concentrated in a small subset of questions. Clinical LLM safety is therefore not a passive consequence of scaling, but a deployment property shaped by evidence quality, retrieval design, context construction, and collective failure behavior.

In many applications, retrieval-augmented generation (RAG) drives tool use and function calling by embedding the (user) queries and matching them to pre-specified tool/function descriptions. In this paper, we address an embedding misalignment issue that often arises in practical applications due to imperfect embedding models or noisy descriptions; such misalignment may lead to incorrect retrieval and task failure. We introduce Online-Optimized RAG, a deployment-time framework that continually adapts retrieval embeddings from live interactions using minimal feedback (e.g., task success). Online-Optimized RAG applies lightweight online gradient updates with negligible per-query latency and requires no changes to the underlying LLM. The method is plug-and-play: it supports both single- and multi-hop tool use, dynamic tool inventories, and K-retrieval with re-ranking. We provide a problem-dependent theoretical analysis that quantifies how the method's performance depends on the initialization quality of the embeddings and other related quantities. Across diverse tool-use and document-retrieval scenarios, our Online-Optimized RAG consistently improves tool selection accuracy and end-task success, thus providing a simple, practical path to robust, self-improving RAG systems.

Hybrid retrieval techniques in Retrieval-Augmented Generation (RAG) systems enhance information retrieval by combining dense and sparse (e.g., BM25-based) retrieval methods. However, existing approaches struggle with adaptability, as fixed weighting schemes fail to adjust to different queries. To address this, we propose DAT (Dynamic Alpha Tuning), a novel hybrid retrieval framework that dynamically balances dense retrieval and BM25 for each query. DAT leverages a large language model (LLM) to evaluate the effectiveness of the top-1 results from both retrieval methods, assigning an effectiveness score to each. It then calibrates the optimal weighting factor through effectiveness score normalization, ensuring a more adaptive and query-aware weighting between the two approaches. Empirical results show that DAT consistently significantly outperforms fixed-weighting hybrid retrieval methods across various evaluation metrics. Even on smaller models, DAT delivers strong performance, highlighting its efficiency and adaptability.

Although retrieval-augmented generation(RAG) significantly improves generation quality by retrieving external knowledge bases and integrating generated content, it faces computational efficiency bottlenecks, particularly in knowledge retrieval tasks involving hierarchical structures for Tree-RAG. This paper proposes a Tree-RAG acceleration method based on the improved Cuckoo Filter, which optimizes entity localization during the retrieval process to achieve significant performance improvements. Tree-RAG effectively organizes entities through the introduction of a hierarchical tree structure, while the Cuckoo Filter serves as an efficient data structure that supports rapid membership queries and dynamic updates. The experiment results demonstrate that our method is much faster than naive Tree-RAG while maintaining high levels of generative quality. When the number of trees is large, our method is hundreds of times faster than naive Tree-RAG. Our work is available at https://github.com/TUPYP7180/CFT-RAG-2025.

Real-world RAG applications often encounter long-context input scenarios, where redundant information and noise results in higher inference costs and reduced performance. To address these challenges, we propose LongRefiner, an efficient plug-and-play refiner that leverages the inherent structural characteristics of long documents. LongRefiner employs dual-level query analysis, hierarchical document structuring, and adaptive refinement through multi-task learning on a single foundation model. Experiments on seven QA datasets demonstrate that LongRefiner achieves competitive performance in various scenarios while using 10x fewer computational costs and latency compared to the best baseline. Further analysis validates that LongRefiner is scalable, efficient, and effective, providing practical insights for real-world long-text RAG applications. Our code is available at https://github.com/ignorejjj/LongRefiner.

Retrieval-Augmented Generation (RAG) has emerged as a powerful framework to improve factuality in large language models (LLMs) by grounding their outputs in retrieved documents. However, ensuring perfect retrieval of relevant information remains challenging, and when irrelevant content is passed downstream to an LLM, it can lead to hallucinations. In this work, we propose Finetune-RAG, a simple and effective fine-tuning approach that features the first-of-its-kind RAG training dataset constructed to mimic real-world imperfections. Experimental results show that Finetune-RAG improves factual accuracy by 21.2% over the base model. We also propose a Bench-RAG, an LLM-as-a-judge evaluation pipeline that stress tests models under realistic imperfect retrieval scenarios. Our codebase and dataset are fully open sourced for community use.

Real-world live retrieval-augmented generation (RAG) systems face significant challenges when processing user queries that are often noisy, ambiguous, and contain multiple intents. While RAG enhances large language models (LLMs) with external knowledge, current systems typically struggle with such complex inputs, as they are often trained or evaluated on cleaner data. This paper introduces Omni-RAG, a novel framework designed to improve the robustness and effectiveness of RAG systems in live, open-domain settings. Omni-RAG employs LLM-assisted query understanding to preprocess user inputs through three key modules: (1) Deep Query Understanding and Decomposition, which utilizes LLMs with tailored prompts to denoise queries (e.g., correcting spelling errors) and decompose multi-intent queries into structured sub-queries; (2) Intent-Aware Knowledge Retrieval, which performs retrieval for each sub-query from a corpus (i.e., FineWeb using OpenSearch) and aggregates the results; and (3) Reranking and Generation, where a reranker (i.e., BGE) refines document selection before a final response is generated by an LLM (i.e., Falcon-10B) using a chain-of-thought prompt. Omni-RAG aims to bridge the gap between current RAG capabilities and the demands of real-world applications, such as those highlighted by the SIGIR 2025 LiveRAG Challenge, by robustly handling complex and noisy queries.

Retrieval-Augmented Generation (RAG) systems, widely used to improve the factual grounding of large language models (LLMs), are increasingly vulnerable to poisoning attacks, where adversaries inject manipulated content into the retriever's corpus. While prior research has predominantly focused on single-attacker settings, real-world scenarios often involve multiple, competing attackers with conflicting objectives. In this work, we introduce PoisonArena, the first benchmark to systematically study and evaluate competing poisoning attacks in RAG. We formalize the multi-attacker threat model, where attackers vie to control the answer to the same query using mutually exclusive misinformation. PoisonArena leverages the Bradley-Terry model to quantify each method's competitive effectiveness in such adversarial environments. Through extensive experiments on the Natural Questions and MS MARCO datasets, we demonstrate that many attack strategies successful in isolation fail under competitive pressure. Our findings highlight the limitations of conventional evaluation metrics like Attack Success Rate (ASR) and F1 score and underscore the need for competitive evaluation to assess real-world attack robustness. PoisonArena provides a standardized framework to benchmark and develop future attack and defense strategies under more realistic, multi-adversary conditions.

Retrieval-Augmented Generation (RAG) is a prevalent approach to infuse a private knowledge base of documents with Large Language Models (LLM) to build Generative Q\&A (Question-Answering) systems. However, RAG accuracy becomes increasingly challenging as the corpus of documents scales up, with Retrievers playing an outsized role in the overall RAG accuracy by extracting the most relevant document from the corpus to provide context to the LLM. In this paper, we propose the 'Blended RAG' method of leveraging semantic search techniques, such as Dense Vector indexes and Sparse Encoder indexes, blended with hybrid query strategies. Our study achieves better retrieval results and sets new benchmarks for IR (Information Retrieval) datasets like NQ and TREC-COVID datasets. We further extend such a 'Blended Retriever' to the RAG system to demonstrate far superior results on Generative Q\&A datasets like SQUAD, even surpassing fine-tuning performance.

Retrieval-Augmented Generation (RAG) improves the factuality of large language models (LLMs) by grounding outputs in retrieved evidence, but faithfulness failures, where generations contradict or extend beyond the provided sources, remain a critical challenge. Existing hallucination detection methods for RAG often rely either on large-scale detector training, which requires substantial annotated data, or on querying external LLM judges, which leads to high inference costs. Although some approaches attempt to leverage internal representations of LLMs for hallucination detection, their accuracy remains limited. Motivated by recent advances in mechanistic interpretability, we employ sparse autoencoders (SAEs) to disentangle internal activations, successfully identifying features that are specifically triggered during RAG hallucinations. Building on a systematic pipeline of information-based feature selection and additive feature modeling, we introduce RAGLens, a lightweight hallucination detector that accurately flags unfaithful RAG outputs using LLM internal representations. RAGLens not only achieves superior detection performance compared to existing methods, but also provides interpretable rationales for its decisions, enabling effective post-hoc mitigation of unfaithful RAG. Finally, we justify our design choices and reveal new insights into the distribution of hallucination-related signals within LLMs. The code is available at https://github.com/Teddy-XiongGZ/RAGLens.

Recent generative engine optimisation (GEO) research has shown that prompt-injection attacks can push a target product to the top of an LLM's recommendation list, with the strongest attacks reporting around 80% success and raising serious security concerns about RAG-based recommendation. However, these results assume the attacked document is always fed directly to the generator, bypassing the retriever and reranker. This is unrealistic: in deployed RAG systems, the attack modifies the document content, which can in turn change whether the document is retrieved and reranked highly enough to reach the generator at all. In this paper, we re-evaluate seven GEO attacks under a realistic three-stage pipeline (retriever\,to\,LLM reranker\,to\,LLM generator). We find that prior protocols substantially overstate attack effectiveness: gradient-based and instruction override attacks largely collapse before reaching the generator, and only LLM-driven prompt injections remain effective end-to-end. Our analysis further reveals that current GEO attacks are easily detectable: a lightweight prompt-injection guard finetuned on a small attack dataset already detects every attack. Our code and data are available at https://github.com/ielab/geo_injection_rag_survival.

Retrieval-Augmented Generation (RAG) is a cornerstone of modern question answering (QA) systems, enabling grounded answers based on external knowledge. Although recent progress has been driven by open-domain datasets, enterprise QA systems need datasets that mirror the concrete, domain-specific issues users raise in day-to-day support scenarios. Critically, evaluating end-to-end RAG systems requires benchmarks comprising not only question--answer pairs but also the specific knowledge base (KB) snapshot from which answers were derived. To address this need, we introduce WixQA, a benchmark suite featuring QA datasets precisely grounded in the released KB corpus, enabling holistic evaluation of retrieval and generation components. WixQA includes three distinct QA datasets derived from Wix.com customer support interactions and grounded in a snapshot of the public Wix Help Center KB: (i) WixQA-ExpertWritten, 200 real user queries with expert-authored, multi-step answers; (ii) WixQA-Simulated, 200 expert-validated QA pairs distilled from user dialogues; and (iii) WixQA-Synthetic, 6,222 LLM-generated QA pairs, with one pair systematically derived from each article in the knowledge base. We release the KB snapshot alongside the datasets under MIT license and provide comprehensive baseline results, forming a unique benchmark for evaluating enterprise RAG systems in realistic enterprise environments.

Retrieval-Augmented Generation (RAG) is often used with Large Language Models (LLMs) to infuse domain knowledge or user-specific information. In RAG, given a user query, a retriever extracts chunks of relevant text from a knowledge base. These chunks are sent to an LLM as part of the input prompt. Typically, any given chunk is repeatedly retrieved across user questions. However, currently, for every question, attention-layers in LLMs fully compute the key values (KVs) repeatedly for the input chunks, as state-of-the-art methods cannot reuse KV-caches when chunks appear at arbitrary locations with arbitrary contexts. Naive reuse leads to output quality degradation. This leads to potentially redundant computations on expensive GPUs and increases latency. In this work, we propose Cache-Craft, a system for managing and reusing precomputed KVs corresponding to the text chunks (we call chunk-caches) in RAG-based systems. We present how to identify chunk-caches that are reusable, how to efficiently perform a small fraction of recomputation to fix the cache to maintain output quality, and how to efficiently store and evict chunk-caches in the hardware for maximizing reuse while masking any overheads. With real production workloads as well as synthetic datasets, we show that Cache-Craft reduces redundant computation by 51% over SOTA prefix-caching and 75% over full recomputation. Additionally, with continuous batching on a real production workload, we get a 1.6X speed up in throughput and a 2X reduction in end-to-end response latency over prefix-caching while maintaining quality, for both the LLaMA-3-8B and LLaMA-3-70B models.

While Retrieval-Augmented Generation (RAG) mitigates hallucination and knowledge staleness in Large Language Models (LLMs), existing frameworks often falter on complex, multi-hop queries that require synthesizing information from disparate sources. Current advanced RAG methods, employing iterative or adaptive strategies, lack a robust mechanism to systematically identify and fill evidence gaps, often propagating noise or failing to gather a comprehensive context. We introduce FAIR-RAG, a novel agentic framework that transforms the standard RAG pipeline into a dynamic, evidence-driven reasoning process. At its core is an Iterative Refinement Cycle governed by a module we term Structured Evidence Assessment (SEA). The SEA acts as an analytical gating mechanism: it deconstructs the initial query into a checklist of required findings and audits the aggregated evidence to identify confirmed facts and, critically, explicit informational gaps. These gaps provide a precise signal to an Adaptive Query Refinement agent, which generates new, targeted sub-queries to retrieve missing information. This cycle repeats until the evidence is verified as sufficient, ensuring a comprehensive context for a final, strictly faithful generation. We conducted experiments on challenging multi-hop QA benchmarks, including HotpotQA, 2WikiMultiHopQA, and MusiQue. In a unified experimental setup, FAIR-RAG significantly outperforms strong baselines. On HotpotQA, it achieves an F1-score of 0.453 -- an absolute improvement of 8.3 points over the strongest iterative baseline -- establishing a new state-of-the-art for this class of methods on these benchmarks. Our work demonstrates that a structured, evidence-driven refinement process with explicit gap analysis is crucial for unlocking reliable and accurate reasoning in advanced RAG systems for complex, knowledge-intensive tasks.

Long-context large language models (LC LLMs) combined with retrieval-augmented generation (RAG) hold strong potential for complex multi-hop and large-document tasks. However, existing RAG systems often suffer from imprecise retrieval, incomplete context coverage under constrained windows, and fragmented information from suboptimal context construction. We introduce Multi-scale Adaptive Context RAG (MacRAG), a hierarchical RAG framework that compresses and partitions documents into coarse-to-fine granularities, then adaptively merges relevant contexts through real-time chunk- and document-level expansions. By initiating with finest-level retrieval and progressively incorporating broader, higher-level context, MacRAG constructs effective query-specific long contexts, optimizing both precision and coverage. Evaluations on challenging LongBench expansions of HotpotQA, 2WikiMultihopQA, and Musique confirm MacRAG consistently surpasses baseline RAG pipelines in single- and multi-step generation using Llama-3.1-8B, Gemini-1.5-pro, and GPT-4o. Our results establish MacRAG as an efficient, scalable solution for real-world long-context, multi-hop reasoning. Our code is available at https://github.com/Leezekun/MacRAG.

Retrieval-Augmented Generation (RAG) is a framework in which a Generator, such as a Large Language Model (LLM), produces answers by retrieving documents from an external collection using a Retriever. In practice, Generators must integrate evidence from long contexts, perform multi-step reasoning, interpret tables, and abstain when evidence is missing. However, existing benchmarks for Generators provide limited coverage, with none enabling simultaneous evaluation of multiple capabilities under unified conditions. To bridge the gap between existing evaluations and practical use, we introduce LIT-RAGBench (the Logic, Integration, Table, Reasoning, and Abstention RAG Generator Benchmark), which defines five categories: Integration, Reasoning, Logic, Table, and Abstention, each further divided into practical evaluation aspects. LIT-RAGBench systematically covers patterns combining multiple aspects across categories. By using fictional entities and scenarios, LIT-RAGBench evaluates answers grounded in the provided external documents. The dataset consists of 114 human-constructed Japanese questions and an English version generated by machine translation with human curation. We use LLM-as-a-Judge for scoring and report category-wise and overall accuracy. Across API-based and open-weight models, no model exceeds 90% overall accuracy. By making strengths and weaknesses measurable within each category, LIT-RAGBench serves as a valuable metric for model selection in practical RAG deployments and for building RAG-specialized models. We release LIT-RAGBench, including the dataset and evaluation code, at https://github.com/Koki-Itai/LIT-RAGBench.

Retrieval-augmented generation (RAG) is an umbrella of different components, design decisions, and domain-specific adaptations to enhance the capabilities of large language models and counter their limitations regarding hallucination and outdated and missing knowledge. Since it is unclear which design decisions lead to a satisfactory performance, developing RAG systems is often experimental and needs to follow a systematic and sound methodology to gain sound and reliable results. However, there is currently no generally accepted methodology for RAG evaluation despite a growing interest in this technology. In this paper, we propose a first blueprint of a methodology for a sound and reliable evaluation of RAG systems and demonstrate its applicability on a real-world software engineering research task: the validation of configuration dependencies across software technologies. In summary, we make two novel contributions: (i) A novel, reusable methodological design for evaluating RAG systems, including a demonstration that represents a guideline, and (ii) a RAG system, which has been developed following this methodology, that achieves the highest accuracy in the field of dependency validation. For the blueprint's demonstration, the key insights are the crucial role of choosing appropriate baselines and metrics, the necessity for systematic RAG refinements derived from qualitative failure analysis, as well as the reporting practices of key design decision to foster replication and evaluation.

Safe and trustworthy use of Large Language Models (LLM) in the processing of healthcare documents and scientific papers could substantially help clinicians, scientists and policymakers in overcoming information overload and focusing on the most relevant information at a given moment. Retrieval Augmented Generation (RAG) is a promising method to leverage the potential of LLMs while enhancing the accuracy of their outcomes. This report assesses the potentials and shortcomings of such approaches in the automatic knowledge synthesis of different types of documents in the health domain. To this end, it describes: (1) an internally developed proof of concept pipeline that employs state-of-the-art practices to deliver safe and trustable analysis for healthcare documents and scientific papers called RAGEv (Retrieval Augmented Generation Evaluation); (2) a set of evaluation tools for LLM-based document retrieval and generation; (3) a benchmark dataset to verify the accuracy and veracity of the results called RAGEv-Bench. It concludes that careful implementations of RAG techniques could minimize most of the common problems in the use of LLMs for document processing in the health domain, obtaining very high scores both on short yes/no answers and long answers. There is a high potential for incorporating it into the day-to-day work of policy support tasks, but additional efforts are required to obtain a consistent and trustworthy tool.

Retrieval augmented generation (RAG) provides the capability to constrain generative model outputs, and mitigate the possibility of hallucination, by providing relevant in-context text. The number of tokens a generative large language model (LLM) can incorporate as context is finite, thus limiting the volume of knowledge from which to generate an answer. We propose a two-layer RAG framework for query-focused answer generation and evaluate a proof-of-concept for this framework in the context of query-focused summary generation from social media forums, focusing on emerging drug-related information. The evaluations demonstrate the effectiveness of the two-layer framework in resource constrained settings to enable researchers in obtaining near real-time data from users.

Large Language Models (LLMs) are constrained by outdated information and a tendency to generate incorrect data, commonly referred to as "hallucinations." Retrieval-Augmented Generation (RAG) addresses these limitations by combining the strengths of retrieval-based methods and generative models. This approach involves retrieving relevant information from a large, up-to-date dataset and using it to enhance the generation process, leading to more accurate and contextually appropriate responses. Despite its benefits, RAG introduces a new attack surface for LLMs, particularly because RAG databases are often sourced from public data, such as the web. In this paper, we propose to identify the vulnerabilities and attacks on retrieval parts (RAG database) and their indirect attacks on generative parts (LLMs). Specifically, we identify that poisoning several customized content passages could achieve a retrieval backdoor, where the retrieval works well for clean queries but always returns customized poisoned adversarial queries. Triggers and poisoned passages can be highly customized to implement various attacks. For example, a trigger could be a semantic group like "The Republican Party, Donald Trump, etc." Adversarial passages can be tailored to different contents, not only linked to the triggers but also used to indirectly attack generative LLMs without modifying them. These attacks can include denial-of-service attacks on RAG and semantic steering attacks on LLM generations conditioned by the triggers. Our experiments demonstrate that by just poisoning 10 adversarial passages can induce 98.2\% success rate to retrieve the adversarial passages. Then, these passages can increase the reject ratio of RAG-based GPT-4 from 0.01\% to 74.6\% or increase the rate of negative responses from 0.22\% to 72\% for targeted queries.

Retrieval-Augmented Generation (RAG) pipelines are central to applying large language models (LLMs) to proprietary or dynamic data. However, building effective RAG flows is complex, requiring careful selection among vector databases, embedding models, text splitters, retrievers, and synthesizing LLMs. The challenge deepens with the rise of agentic paradigms. Modules like verifiers, rewriters, and rerankers-each with intricate hyperparameter dependencies have to be carefully tuned. Balancing tradeoffs between latency, accuracy, and cost becomes increasingly difficult in performance-sensitive applications. We introduce syftr, a framework that performs efficient multi-objective search over a broad space of agentic and non-agentic RAG configurations. Using Bayesian Optimization, syftr discovers Pareto-optimal flows that jointly optimize task accuracy and cost. A novel early-stopping mechanism further improves efficiency by pruning clearly suboptimal candidates. Across multiple RAG benchmarks, syftr finds flows which are on average approximately 9 times cheaper while preserving most of the accuracy of the most accurate flows on the Pareto-frontier. Furthermore, syftr's ability to design and optimize allows integrating new modules, making it even easier and faster to realize high-performing generative AI pipelines.

Graph-based retrieval-augmented generation (Graph RAG) is increasingly deployed to support LLM applications by augmenting user queries with structured knowledge retrieved from a knowledge graph. While Graph RAG improves relational reasoning, it introduces a largely understudied threat: adversaries can reconstruct subgraphs from a target RAG system's knowledge graph, enabling privacy inference and replication of curated knowledge assets. We show that existing attacks are largely ineffective against Graph RAG even with simple prompt-based safeguards, because these attacks expose explicit exfiltration intent and are therefore easily suppressed by lightweight safe prompts. We identify three technical challenges for practical Graph RAG extraction under realistic safeguards and introduce GRASP, a closed-box, multi-turn subgraph reconstruction attack. GRASP (i) reframes extraction as a context-processing task, (ii) enforces format-compliant, instance-grounded outputs via per-record identifiers to reduce hallucinations and preserve relational details, and (iii) diversifies goal-driven attack queries using a momentum-aware scheduler to operate within strict query budgets. Across two real-world knowledge graphs, four safety-aligned LLMs, and multiple Graph RAG frameworks, GRASP attains the strongest type-faithful reconstruction where prior methods fail, reaching up to 82.9 F1. We further evaluate defenses and propose two lightweight mitigations that substantially reduce reconstruction fidelity without utility loss.

Large language models (LLMs) have achieved remarkable success due to their exceptional generative capabilities. Despite their success, they also have inherent limitations such as a lack of up-to-date knowledge and hallucination. Retrieval-Augmented Generation (RAG) is a state-of-the-art technique to mitigate these limitations. The key idea of RAG is to ground the answer generation of an LLM on external knowledge retrieved from a knowledge database. Existing studies mainly focus on improving the accuracy or efficiency of RAG, leaving its security largely unexplored. We aim to bridge the gap in this work. We find that the knowledge database in a RAG system introduces a new and practical attack surface. Based on this attack surface, we propose PoisonedRAG, the first knowledge corruption attack to RAG, where an attacker could inject a few malicious texts into the knowledge database of a RAG system to induce an LLM to generate an attacker-chosen target answer for an attacker-chosen target question. We formulate knowledge corruption attacks as an optimization problem, whose solution is a set of malicious texts. Depending on the background knowledge (e.g., black-box and white-box settings) of an attacker on a RAG system, we propose two solutions to solve the optimization problem, respectively. Our results show PoisonedRAG could achieve a 90% attack success rate when injecting five malicious texts for each target question into a knowledge database with millions of texts. We also evaluate several defenses and our results show they are insufficient to defend against PoisonedRAG, highlighting the need for new defenses.

Retrieval-Augmented Generation (RAG) has quickly grown into a pivotal paradigm in the development of Large Language Models (LLMs). While much of the current research in this field focuses on performance optimization, particularly in terms of accuracy and efficiency, the trustworthiness of RAG systems remains an area still under exploration. From a positive perspective, RAG systems are promising to enhance LLMs by providing them with useful and up-to-date knowledge from vast external databases, thereby mitigating the long-standing problem of hallucination. While from a negative perspective, RAG systems are at the risk of generating undesirable contents if the retrieved information is either inappropriate or poorly utilized. To address these concerns, we propose a unified framework that assesses the trustworthiness of RAG systems across six key dimensions: factuality, robustness, fairness, transparency, accountability, and privacy. Within this framework, we thoroughly review the existing literature on each dimension. Additionally, we create the evaluation benchmark regarding the six dimensions and conduct comprehensive evaluations for a variety of proprietary and open-source models. Finally, we identify the potential challenges for future research based on our investigation results. Through this work, we aim to lay a structured foundation for future investigations and provide practical insights for enhancing the trustworthiness of RAG systems in real-world applications.

This study examined code issue detection and revision automation by integrating Large Language Models (LLMs) such as OpenAI's GPT-3.5 Turbo and GPT-4o into software development workflows. A static code analysis framework detects issues such as bugs, vulnerabilities, and code smells within a large-scale software project. Detailed information on each issue was extracted and organized to facilitate automated code revision using LLMs. An iterative prompt engineering process is applied to ensure that prompts are structured to produce accurate and organized outputs aligned with the project requirements. Retrieval-augmented generation (RAG) is implemented to enhance the relevance and precision of the revisions, enabling LLM to access and integrate real-time external knowledge. The issue of LLM hallucinations - where the model generates plausible but incorrect outputs - is addressed by a custom-built "Code Comparison App," which identifies and corrects erroneous changes before applying them to the codebase. Subsequent scans using the static code analysis framework revealed a significant reduction in code issues, demonstrating the effectiveness of combining LLMs, static analysis, and RAG to improve code quality, streamline the software development process, and reduce time and resource expenditure.

RAG systems consist of multiple modules to work together. However, these modules are usually separately trained. We argue that a system like RAG that incorporates multiple modules should be jointly optimized to achieve optimal performance. To demonstrate this, we design a specific pipeline called SmartRAG that includes a policy network and a retriever. The policy network can serve as 1) a decision maker that decides when to retrieve, 2) a query rewriter to generate a query most suited to the retriever, and 3) an answer generator that produces the final response with/without the observations. We then propose to jointly optimize the whole system using a reinforcement learning algorithm, with the reward designed to encourage the system to achieve the best performance with minimal retrieval cost. When jointly optimized, all the modules can be aware of how other modules are working and thus find the best way to work together as a complete system. Empirical results demonstrate that the jointly optimized SmartRAG can achieve better performance than separately optimized counterparts.

Large language models (LLMs) demonstrate powerful capabilities, but they still face challenges in practical applications, such as hallucinations, slow knowledge updates, and lack of transparency in answers. Retrieval-Augmented Generation (RAG) refers to the retrieval of relevant information from external knowledge bases before answering questions with LLMs. RAG has been demonstrated to significantly enhance answer accuracy, reduce model hallucination, particularly for knowledge-intensive tasks. By citing sources, users can verify the accuracy of answers and increase trust in model outputs. It also facilitates knowledge updates and the introduction of domain-specific knowledge. RAG effectively combines the parameterized knowledge of LLMs with non-parameterized external knowledge bases, making it one of the most important methods for implementing large language models. This paper outlines the development paradigms of RAG in the era of LLMs, summarizing three paradigms: Naive RAG, Advanced RAG, and Modular RAG. It then provides a summary and organization of the three main components of RAG: retriever, generator, and augmentation methods, along with key technologies in each component. Furthermore, it discusses how to evaluate the effectiveness of RAG models, introducing two evaluation methods for RAG, emphasizing key metrics and abilities for evaluation, and presenting the latest automatic evaluation framework. Finally, potential future research directions are introduced from three aspects: vertical optimization, horizontal scalability, and the technical stack and ecosystem of RAG.

Retrieval-augmented generation (RAG) is critical for reducing hallucinations and incorporating external knowledge into Large Language Models (LLMs). However, advanced RAG systems face a trade-off between performance and efficiency. Multi-round RAG approaches achieve strong reasoning but incur excessive LLM calls and token costs, while Graph RAG methods suffer from computationally expensive, error-prone graph construction and retrieval redundancy. To address these challenges, we propose T^2RAG, a novel framework that operates on a simple, graph-free knowledge base of atomic triplets. T^2RAG leverages an LLM to decompose questions into searchable triplets with placeholders, which it then iteratively resolves by retrieving evidence from the triplet database. Empirical results show that T^2RAG significantly outperforms state-of-the-art multi-round and Graph RAG methods, achieving an average performance gain of up to 11\% across six datasets while reducing retrieval costs by up to 45\%. Our code is available at https://github.com/rockcor/T2RAG

This paper presents the development and application of a Large Language Model Retrieval-Augmented Generation (LLM-RAG) system tailored for nanotechnology research. The system leverages the capabilities of a sophisticated language model to serve as an intelligent research assistant, enhancing the efficiency and comprehensiveness of literature reviews in the nanotechnology domain. Central to this LLM-RAG system is its advanced query backend retrieval mechanism, which integrates data from multiple reputable sources. The system retrieves relevant literature by utilizing Google Scholar's advanced search, and scraping open-access papers from Elsevier, Springer Nature, and ACS Publications. This multifaceted approach ensures a broad and diverse collection of up-to-date scholarly articles and papers. The proposed system demonstrates significant potential in aiding researchers by providing a streamlined, accurate, and exhaustive literature retrieval process, thereby accelerating research advancements in nanotechnology. The effectiveness of the LLM-RAG system is validated through rigorous testing, illustrating its capability to significantly reduce the time and effort required for comprehensive literature reviews, while maintaining high accuracy, query relevance and outperforming standard, publicly available LLMS.

Retrieval Augmented Generation (RAG) complements the knowledge of Large Language Models (LLMs) by leveraging external information to enhance response accuracy for queries. This approach is widely applied in several fields by taking its advantage of injecting the most up-to-date information, and researchers are focusing on understanding and improving this aspect to unlock the full potential of RAG in such high-stakes applications. However, despite the potential of RAG to address these needs, the mechanisms behind the confidence levels of its outputs remain underexplored, although the confidence of information is very critical in some domains, such as finance, healthcare, and medicine. Our study focuses the impact of RAG on confidence within the medical domain under various configurations and models. We evaluate confidence by treating the model's predicted probability as its output and calculating Expected Calibration Error (ECE) and Adaptive Calibration Error (ACE) scores based on the probabilities and accuracy. In addition, we analyze whether the order of retrieved documents within prompts calibrates the confidence. Our findings reveal large variation in confidence and accuracy depending on the model, settings, and the format of input prompts. These results underscore the necessity of optimizing configurations based on the specific model and conditions.