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Oct 16

CoDimRecon: Agentic Reconstruction of Sim-Ready 3D Scenes with Deformable Curves, Surfaces, and Volumes

Reconstructing simulation-ready 3D scenes from real-world observations enables robotics, gaming, and immersive applications, yet existing methods largely assume rigid objects. This leaves an important gap for deformables, whose simulation-ready geometry depends on dimensionality (curves, surfaces, or volumes) and whose behavior may require models beyond elasticity. We present CoDimRecon, an agentic framework that reconstructs editable scenes containing rigid, articulated, and deformable objects from multi-view RGB observations. Scene-level geometric priors ground scale and layout, while object-level generated meshes guide the agent toward detailed, compact geometry; articulated rigid objects are decomposed into movable parts with explicit joints. For deformables, category-wise agent sessions reconstruct curves as centerlines with radii, surfaces as manifold shells with thickness, and volumes as watertight solids for volumetric meshing. Reusable simulator skills initialize compatible physical models and parameters, while agent-guided behavioral tests expose mismatches and trigger targeted revisions of motion, geometry, numerics, or material modeling. On evaluated Replica and ScanNet++ scenes, CoDimRecon achieves competitive compositional reconstruction accuracy while additionally producing deformable assets for rod, shell, and solid simulation. We further demonstrate robot interactions across all three representations, including a controlled paper-folding case in which behavioral testing motivates plastic bending.

  • 5 authors
·
Sep 29

Ghost on the Shell: An Expressive Representation of General 3D Shapes

The creation of photorealistic virtual worlds requires the accurate modeling of 3D surface geometry for a wide range of objects. For this, meshes are appealing since they 1) enable fast physics-based rendering with realistic material and lighting, 2) support physical simulation, and 3) are memory-efficient for modern graphics pipelines. Recent work on reconstructing and statistically modeling 3D shape, however, has critiqued meshes as being topologically inflexible. To capture a wide range of object shapes, any 3D representation must be able to model solid, watertight, shapes as well as thin, open, surfaces. Recent work has focused on the former, and methods for reconstructing open surfaces do not support fast reconstruction with material and lighting or unconditional generative modelling. Inspired by the observation that open surfaces can be seen as islands floating on watertight surfaces, we parameterize open surfaces by defining a manifold signed distance field on watertight templates. With this parameterization, we further develop a grid-based and differentiable representation that parameterizes both watertight and non-watertight meshes of arbitrary topology. Our new representation, called Ghost-on-the-Shell (G-Shell), enables two important applications: differentiable rasterization-based reconstruction from multiview images and generative modelling of non-watertight meshes. We empirically demonstrate that G-Shell achieves state-of-the-art performance on non-watertight mesh reconstruction and generation tasks, while also performing effectively for watertight meshes.

  • 7 authors
·
Oct 23, 2023

The Data Manifold under the Microscope

A significant gap exists between theory and practice in deep learning. Generalization and approximation error bounds are often derived for simplified models or are too loose to be informative. Many rely on the manifold hypothesis and on geometric regularity such as intrinsic dimension, curvature, and reach. Progress requires insight into data-manifold geometry and suitable benchmarks, yet existing options are polarized: analytic manifolds with known geometry but limited applicability, or real-world datasets where geometry is only coarsely estimable. We introduce a benchmarking framework for studying data geometry. We repurpose and extend dSprites and COIL-20 with additional transformation dimensions and dense, axis-aligned sampling, and pair them with finite-difference estimators that recover curvature, reach, and volume at near-ground-truth accuracy in a regime where general-purpose estimators are unreliable or difficult to deploy. The framework is intended as a controlled testbed, useful as a calibration environment for geometric estimators and a sandbox for probing theoretical assumptions. To illustrate its use, we present two application studies, namely assessing the scaling behavior of the bounds of Genovese et al. and Fefferman et al., and tracking the layer-wise geometry of a β-VAE, highlighting the behavior of current bounds and the value of controlled benchmarks for guiding and validating future theory. A reference implementation is available at https://github.com/koulakis/manifold-microscope.

  • 2 authors
·
Jun 13 8

Attention Manifolds: Steering or Blocking Language Models by Editing Learned B-Spline Surfaces

In standard transformer attention, a source token sends the same value vector to every receiver. The query determines how much to attend but not what to extract. This work introduces attention manifolds: learned 2D B-spline surfaces S_d(q_d, k_d) that modulate each value dimension based on the query-key interaction. Each surface is a tensor-product cubic B-spline initialized to zero, preserving pretrained behavior. Applied to LLaMA 3.2-1B-Instruct and 3B-Instruct, attention manifolds reduce WikiText-2 validation perplexity by 2--2.5 points with 0.3\% parameter overhead. Across 112 diverse prompts, surfaces change greedy-decoded output for 69\% (1B) to 83\% (3B) of cases, with the strongest effects on ambiguous and polysemous inputs (94--100\% change rate). The surfaces improve output quality: correcting factual errors (``the CAP theorem has three main components'' to ``it is impossible to guarantee all three''), increasing precision (``impossible to know certain properties'' to ``impossible to know both position and momentum''), and adding specificity (a generic quote to an attributed Saint Augustine citation, consistently at both scales). The learned surfaces are also mechanically editable: inverting a layer's coefficients changes greedy output for 9/10 prompts (KL~0.010), providing a geometric mechanism for model steering. Setting surface coefficients to -1 creates ``attention walls'' that block value flow through specific dimensions. In a preliminary experiment, a layer-wide wall redirects an explosive-device prompt from specific instructions to general educational content, suggesting a path toward safety-oriented manifold shaping.

  • 1 authors
·
Sep 23

Extremal black hole mimickers: geometry, stability, and long-delay signal trains

We present a spacetime that serves as a horizonless mimicker of extremal black holes. Unlike previously studied mimickers of black holes with non-degenerate horizons, whose geometries are of the wormhole type and consist of two asymptotically flat regions connected by a very long throat, the mimicker of an extremal black hole possesses a single asymptotically flat region at one end and an infinitely long throat at the other. In the throat region, the spacetime approaches the direct-product geometry M_{1,1} times S^2, where M_{1,1} is two-dimensional Minkowski spacetime and S^2 is the two-sphere. We investigate scalar-field dynamics and the fate of the Aretakis instability. Although Aretakis-like modes arise in a local analysis of the throat, they do not lead to a physical instability of the mimicker. A scalar perturbation initially localized in the throat gives rise, at late times, to a sequence of signals with a characteristic separation t_{rm delay}sim 1/λ, where λll 1 is a deformation parameter. This timescale is parametrically larger than the echo time t_{rm echo}sim ln(1/λ) characteristic of non-extremal black-hole mimickers. We refer to this sequence as a {\it long-delay signal train}. Geometrically, the periodicity of the long-delay signals is associated with periodic geodesics on S^2. We then extend the construction to extremal Kerr. In this case, the throat region approaches a generalized product geometry involving M_{1,1} and a two-dimensional surface Σ_2. The corresponding signals are expected to form a quasi-periodic signal train, reflecting the quasi-periodic geodesic motion on Σ_2. We also comment on the generalization to wormhole mimickers of non-extremal black holes and on the implications of these results for unitarity in the context of the AdS/CFT correspondence.

  • 1 authors
·
Oct 7

A Heat Diffusion Perspective on Geodesic Preserving Dimensionality Reduction

Diffusion-based manifold learning methods have proven useful in representation learning and dimensionality reduction of modern high dimensional, high throughput, noisy datasets. Such datasets are especially present in fields like biology and physics. While it is thought that these methods preserve underlying manifold structure of data by learning a proxy for geodesic distances, no specific theoretical links have been established. Here, we establish such a link via results in Riemannian geometry explicitly connecting heat diffusion to manifold distances. In this process, we also formulate a more general heat kernel based manifold embedding method that we call heat geodesic embeddings. This novel perspective makes clearer the choices available in manifold learning and denoising. Results show that our method outperforms existing state of the art in preserving ground truth manifold distances, and preserving cluster structure in toy datasets. We also showcase our method on single cell RNA-sequencing datasets with both continuum and cluster structure, where our method enables interpolation of withheld timepoints of data. Finally, we show that parameters of our more general method can be configured to give results similar to PHATE (a state-of-the-art diffusion based manifold learning method) as well as SNE (an attraction/repulsion neighborhood based method that forms the basis of t-SNE).

  • 7 authors
·
May 30, 2023

anyakrakusuma: A Python Library for Entropic Schrödinger Bridges on Idealized Geometries

We present anyakrakusuma, an open-source Python library that solves the discrete static Schrödinger bridge problem, the entropically regularized counterpart of optimal transport, through a log-domain Sinkhorn--Knopp iteration and reconstructs the entropic interpolation between two empirical point clouds. The solver is paired with a diagnostic pipeline that characterizes the optimal coupling and the intermediate distributions through information-theoretic and geometric measures. We exercise the library on four idealized planar cases spanning a circle-to-circle dilation, a spiral-to-mixture fragmentation, a rigid reorientation of two moons, and a Lissajous-to-trefoil deformation. The log-domain formulation is necessary rather than merely convenient at the parameters studied, where the cost-to-regularization ratio reaches four hundred and the Gibbs kernel underflows double precision across most of its range; the iteration nonetheless attains a marginal residual of 10^{-9} and unit marginal fidelity in every case. Residual histories decay geometrically over approximately eight decades at per-iteration contraction factors between 0.966 and 0.976, which are local rates near the fixed point that lie many orders of magnitude below the worst-case Hilbert-metric bound. The covariance analysis recovers an imposed ninety-degree reorientation to within 0.07^circ, roughly forty times smaller than its uncertainty, across a masked interval of near-isotropy on which the principal axis is unobservable. The diagnostics are reported with explicit attention to the regimes in which each is well defined, including the differential entropy, which is meaningful only on the open interpolation interval. The presented cases are constructed rather than measured; quantitative application to empirical point clouds requires further study.