new

Get trending papers in your email inbox!

Subscribe

Daily Papers

byAK and the research community

Nov 4

Evaluator-in-the-Loop Monte Carlo Tree Search via LLM Agents for Motif Scaffolding in Protein Design

Motif-scaffolding systems commonly follow a generate-then-filter paradigm, in which candidate proteins are generated independently and structural evaluation is used primarily for terminal screening or ranking. This paradigm underuses evaluation: failed predictions contain state-specific evidence about whether a design requires repair of motif geometry, global foldability, or other structural constraints. We introduce ELMS (Evidence-based LLM-guided Monte Carlo Search), an evaluator-in-the-loop search framework for motif scaffolding that turns such evaluator feedback into targeted design actions. Effective reuse of structural feedback is nontrivial because different scaffold states exhibit different failure modes, and repeatedly refining a single trajectory can prematurely commit computation to an unproductive region of sequence space. ELMS therefore retains evaluated scaffolds as persistent search states: a Critic Agent diagnoses state-local structural failures, a Policy Agent selects targeted operators with execution parameters, motif-locked operators realize legal sequence modifications, and MCTS determines which historical states should receive further design effort. Under the standard GeomMotif protocol (100 candidates per task), ELMS achieves Successful rates of 86.41\% on single-motif tasks and 84.57\% on paired-motif tasks, exceeding the strongest prior baseline by 19.3 and 21.9 percentage points, respectively. On MotifBench, under a matched 100-candidate search budget, it solves 26.7 of 30 tasks on average (88.89\% Task Success), compared with 16.0 tasks (53.33\%) for the strongest baseline. These results establish ELMS as an effective approach for converting structural evaluation from a terminal filter into actionable guidance for iterative motif scaffolding.

  • 4 authors
·
Oct 1

Necessary but Not Sufficient: Temperature Control and Reproducibility in LLM-as-Judge Safety Evaluations

LLM-as-judge ("grader") components are now standard in evaluation harnesses, including safety evaluations where a pass/fail verdict may gate downstream deployment decisions. A widespread assumption is that setting the grader's sampling temperature to 0 makes grading deterministic. We test this assumption against a real safety-evaluation codebase (Japan AISI's open-source aisev) and show it fails on two levels. First, the harness invokes its grader without setting temperature or seed; the underlying provider silently applies its default of 1.0, so items near the decision boundary flip pass/fail across identical runs (per-item disagreement up to ~50% over 20 runs). Second, pinning temperature=0 reduces but does not eliminate flips: across 690 API calls spanning two providers, three model tiers, and five sampling configurations, 1-2 of 7 borderline items remain non-reproducible even under forced greedy decoding (top_k=1). Claude Opus 4.7/4.8 has since deprecated temperature entirely, rendering the primary mitigation inapplicable to newer model generations. These findings expose a structural gap: evaluation harnesses that report single-run verdicts without variance or grader-disagreement metrics can present noise as a safety property. We release a reproduction harness (690 calls, 7 conditions) and recommend that harnesses treat grader disagreement as a first-class health metric alongside the scores themselves.

  • 1 authors
·
Jun 23

Thinking with Frames: Generative Video Distortion Evaluation via Frame Reward Model

Recent advances in video reward models and post-training strategies have improved text-to-video (T2V) generation. While these models typically assess visual quality, motion quality, and text alignment, they often overlook key structural distortions, such as abnormal object appearances and interactions, which can degrade the overall quality of the generative video. To address this gap, we introduce REACT, a frame-level reward model designed specifically for structural distortions evaluation in generative videos. REACT assigns point-wise scores and attribution labels by reasoning over video frames, focusing on recognizing distortions. To support this, we construct a large-scale human preference dataset, annotated based on our proposed taxonomy of structural distortions, and generate additional data using a efficient Chain-of-Thought (CoT) synthesis pipeline. REACT is trained with a two-stage framework: (1) supervised fine-tuning with masked loss for domain knowledge injection, followed by (2) reinforcement learning with Group Relative Policy Optimization (GRPO) and pairwise rewards to enhance reasoning capability and align output scores with human preferences. During inference, a dynamic sampling mechanism is introduced to focus on frames most likely to exhibit distortion. We also present REACT-Bench, a benchmark for generative video distortion evaluation. Experimental results demonstrate that REACT complements existing reward models in assessing structutal distortion, achieving both accurate quantitative evaluations and interpretable attribution analysis.

  • 8 authors
·
Jan 7

VeriReason: Reinforcement Learning with Testbench Feedback for Reasoning-Enhanced Verilog Generation

Automating Register Transfer Level (RTL) code generation using Large Language Models (LLMs) offers substantial promise for streamlining digital circuit design and reducing human effort. However, current LLM-based approaches face significant challenges with training data scarcity, poor specification-code alignment, lack of verification mechanisms, and balancing generalization with specialization. Inspired by DeepSeek-R1, we introduce VeriReason, a framework integrating supervised fine-tuning with Guided Reward Proximal Optimization (GRPO) reinforcement learning for RTL generation. Using curated training examples and a feedback-driven reward model, VeriReason combines testbench evaluations with structural heuristics while embedding self-checking capabilities for autonomous error correction. On the VerilogEval Benchmark, VeriReason delivers significant improvements: achieving 83.1% functional correctness on the VerilogEval Machine benchmark, substantially outperforming both comparable-sized models and much larger commercial systems like GPT-4 Turbo. Additionally, our approach demonstrates up to a 2.8X increase in first-attempt functional correctness compared to baseline methods and exhibits robust generalization to unseen designs. To our knowledge, VeriReason represents the first system to successfully integrate explicit reasoning capabilities with reinforcement learning for Verilog generation, establishing a new state-of-the-art for automated RTL synthesis. The models and datasets are available at: https://huggingface.co/collections/AI4EDA-CASE Code is Available at: https://github.com/NellyW8/VeriReason

  • 5 authors
·
May 17, 2025

La-Proteina: Atomistic Protein Generation via Partially Latent Flow Matching

Recently, many generative models for de novo protein structure design have emerged. Yet, only few tackle the difficult task of directly generating fully atomistic structures jointly with the underlying amino acid sequence. This is challenging, for instance, because the model must reason over side chains that change in length during generation. We introduce La-Proteina for atomistic protein design based on a novel partially latent protein representation: coarse backbone structure is modeled explicitly, while sequence and atomistic details are captured via per-residue latent variables of fixed dimensionality, thereby effectively side-stepping challenges of explicit side-chain representations. Flow matching in this partially latent space then models the joint distribution over sequences and full-atom structures. La-Proteina achieves state-of-the-art performance on multiple generation benchmarks, including all-atom co-designability, diversity, and structural validity, as confirmed through detailed structural analyses and evaluations. Notably, La-Proteina also surpasses previous models in atomistic motif scaffolding performance, unlocking critical atomistic structure-conditioned protein design tasks. Moreover, La-Proteina is able to generate co-designable proteins of up to 800 residues, a regime where most baselines collapse and fail to produce valid samples, demonstrating La-Proteina's scalability and robustness.

  • 9 authors
·
Jul 12, 2025

RipplePLM: Structural and Property Decoupling for Protein Mutation Effect Generation

Protein mutation effect generation asks a model to describe the functional consequence of a point mutation in natural language. Existing protein-to-text systems typically encode mutation information into undifferentiated representations, overlooking the organization of mutation-induced evidence across structural and biochemical factors. We propose RipplePLM, a mutation-aware generation framework centered on Direct-Distal Cross-Attention (DDCA). By constructing a residue-level Mutation Perturbation Field from pre-trained protein language models, DDCA leverages predicted contact maps to organize mutation representations into two pathways: the mutation site's immediate contact neighborhood and its multi-hop distal context. To complement this structural decomposition, we further introduce the Property Latent Chain (PLChain), which injects expert-guided supervision of biochemical property changes (e.g., thermostability and optimal pH) into the LLM hidden-state pathway through latent property tokens. On MutaDescribe, RipplePLM improves over mutation-specific baselines on temporal and structural splits; under a matched-backbone comparison, average structural-split ROUGE-L increases from 22.23 to 35.65. Expert evaluation further shows a higher proportion of biologically accurate or relevant descriptions than the mutation-specific baseline. Additional ablations, representation diagnostics, and low-N fitness regression experiments further support the effectiveness of the learned mutation-aware representations. Code: https://github.com/Lyu6PosHao/RipplePLM.

  • 5 authors
·
Oct 2

Ovis: Structural Embedding Alignment for Multimodal Large Language Model

Current Multimodal Large Language Models (MLLMs) typically integrate a pre-trained LLM with another pre-trained vision transformer through a connector, such as an MLP, endowing the LLM with visual capabilities. However, the misalignment between two embedding strategies in MLLMs -- the structural textual embeddings based on an embedding look-up table and the continuous embeddings generated directly by the vision encoder -- makes challenges for a more seamless fusion of visual and textual information. We propose Ovis, a novel MLLM architecture designed to structurally align visual and textual embeddings. Ovis integrates an additional learnable visual embedding table into the visual encoder's process. To capture rich visual semantics, each image patch indexes the visual embedding table multiple times, resulting in a final visual embedding that is a probabilistic combination of the indexed embeddings. This structural approach mirrors the method used for generating textual embeddings. Empirical evaluations on various multimodal benchmarks demonstrate that Ovis outperforms open-source MLLMs of similar parameter scales and even surpasses the proprietary model Qwen-VL-Plus overall. These results highlight the potential of Ovis' structured visual representation for advancing MLLM architectural design and promoting more effective multimodal learning. Both the source code and the training dataset of Ovis will be made publicly available.

  • 7 authors
·
May 31, 2024

ContractShield: Bridging Semantic-Structural Gaps via Hierarchical Cross-Modal Fusion for Multi-Label Vulnerability Detection in Obfuscated Smart Contracts

Smart contracts are increasingly targeted by adversaries employing obfuscation techniques such as bogus code injection and control flow manipulation to evade vulnerability detection. Existing multimodal methods often process semantic, temporal, and structural features in isolation and fuse them using simple strategies such as concatenation, which neglects cross-modal interactions and weakens robustness, as obfuscation of a single modality can sharply degrade detection accuracy. To address these challenges, we propose ContractShield, a robust multimodal framework with a novel fusion mechanism that effectively correlates multiple complementary features through a three-level fusion. Self-attention first identifies patterns that indicate vulnerability within each feature space. Cross-modal attention then establishes meaningful connections between complementary signals across modalities. Then, adaptive weighting dynamically calibrates feature contributions based on their reliability under obfuscation. For feature extraction, ContractShield integrates (1) CodeBERT with a sliding window mechanism to capture semantic dependencies in source code, (2) Extended long short-term memory (xLSTM) to model temporal dynamics in opcode sequences, and (3) GATv2 to identify structural invariants in control flow graphs (CFGs) that remain stable across obfuscation. Empirical evaluation demonstrates resilience of ContractShield, achieving a 89 percentage Hamming Score with only a 1-3 percentage drop compared to non-obfuscated data. The framework simultaneously detects five major vulnerability types with 91 percentage F1-score, outperforming state-of-the-art approaches by 6-15 percentage under adversarial conditions.

  • 7 authors
·
Apr 2

Routine: A Structural Planning Framework for LLM Agent System in Enterprise

The deployment of agent systems in an enterprise environment is often hindered by several challenges: common models lack domain-specific process knowledge, leading to disorganized plans, missing key tools, and poor execution stability. To address this, this paper introduces Routine, a multi-step agent planning framework designed with a clear structure, explicit instructions, and seamless parameter passing to guide the agent's execution module in performing multi-step tool-calling tasks with high stability. In evaluations conducted within a real-world enterprise scenario, Routine significantly increases the execution accuracy in model tool calls, increasing the performance of GPT-4o from 41.1% to 96.3%, and Qwen3-14B from 32.6% to 83.3%. We further constructed a Routine-following training dataset and fine-tuned Qwen3-14B, resulting in an accuracy increase to 88.2% on scenario-specific evaluations, indicating improved adherence to execution plans. In addition, we employed Routine-based distillation to create a scenario-specific, multi-step tool-calling dataset. Fine-tuning on this distilled dataset raised the model's accuracy to 95.5%, approaching GPT-4o's performance. These results highlight Routine's effectiveness in distilling domain-specific tool-usage patterns and enhancing model adaptability to new scenarios. Our experimental results demonstrate that Routine provides a practical and accessible approach to building stable agent workflows, accelerating the deployment and adoption of agent systems in enterprise environments, and advancing the technical vision of AI for Process.

  • 16 authors
·
Jul 18, 2025

GONE: Structural Knowledge Unlearning via Neighborhood-Expanded Distribution Shaping

Unlearning knowledge is a pressing and challenging task in Large Language Models (LLMs) because of their unprecedented capability to memorize and digest training data at scale, raising more significant issues regarding safety, privacy, and intellectual property. However, existing works, including parameter editing, fine-tuning, and distillation-based methods, are all focused on flat sentence-level data but overlook the relational, multi-hop, and reasoned knowledge in naturally structured data. In response to this gap, this paper introduces Graph Oblivion and Node Erasure (GONE), a benchmark for evaluating knowledge unlearning over structured knowledge graph (KG) facts in LLMs. This KG-based benchmark enables the disentanglement of three effects of unlearning: direct fact removal, reasoning-based leakage, and catastrophic forgetting. In addition, Neighborhood-Expanded Distribution Shaping (NEDS), a novel unlearning framework, is designed to leverage graph connectivity and identify anchor correlated neighbors, enforcing a precise decision boundary between the forgotten fact and its semantic neighborhood. Evaluations on LLaMA-3-8B and Mistral-7B across multiple knowledge editing and unlearning methods showcase NEDS's superior performance (1.000 on unlearning efficacy and 0.839 on locality) on GONE and other benchmarks. Code is available at https://anonymous.4open.science/r/GONE-4679/.

  • 3 authors
·
Feb 20

Eddy-VL 1.9B: Structural Pruning and Layered Distillation for Edge-Deployable Multimodal Embedding

In this report, we introduce Eddy-VL 1.9B, a compressed multimodal embedding model built on Qwen3-VL-Embedding-2B for offline, edge-deployable vision-language retrieval. Eddy-VL targets air-gapped forensic and investigative settings where cloud APIs are unavailable and low latency is essential. Compression combines (i) probe-driven structural pruning that removes four redundant text-decoder layers (28 to 24) ranked by adjacent-layer linear CKA, and (ii) layered knowledge distillation with hole-covering teacher-student mappings, mid-layer attention-map 1-CKA, and final-layer MSE and cosine losses with Matryoshka dimensions {128, 256, 512, 1024, 2048}. The released model contains 1,926,188,032 parameters (3.85 GB bf16), representing approximately 9.5% fewer parameters than the 2.13B teacher model. Empirical evaluations on MMEB-V2 (78 tasks, VLM2Vec protocol) show that Eddy-VL achieves an overall score of 63.2 compared with 68.9 for the teacher, retaining 91.7% of the teacher's performance while recovering 6.4 of the 12.1 points lost through pruning alone (56.8). Compositional reasoning performance remains close to the teacher on SugarCrepe (86.1 vs. 86.4), MR2-Bench (24.5 vs. 24.7), and ARO (59.5 vs. 60.4), while Winoground group performance (6.8 vs. 8.5) remains the primary limitation. Depth pruning also reduces forward latency by approximately 10% (150.0 to 136.4 ms per image on NVIDIA DGX Spark using FlashAttention-2). We present the architecture, compression methodology, training procedures, and evaluation results, demonstrating the effectiveness of Eddy-VL for multimodal retrieval under constrained edge deployment. Model weights and inference code are publicly available on Hugging Face.

Urock-AI Urock
·
Jul 14

TabStruct: Measuring Structural Fidelity of Tabular Data

Evaluating tabular generators remains a challenging problem, as the unique causal structural prior of heterogeneous tabular data does not lend itself to intuitive human inspection. Recent work has introduced structural fidelity as a tabular-specific evaluation dimension to assess whether synthetic data complies with the causal structures of real data. However, existing benchmarks often neglect the interplay between structural fidelity and conventional evaluation dimensions, thus failing to provide a holistic understanding of model performance. Moreover, they are typically limited to toy datasets, as quantifying existing structural fidelity metrics requires access to ground-truth causal structures, which are rarely available for real-world datasets. In this paper, we propose a novel evaluation framework that jointly considers structural fidelity and conventional evaluation dimensions. We introduce a new evaluation metric, global utility, which enables the assessment of structural fidelity even in the absence of ground-truth causal structures. In addition, we present TabStruct, a comprehensive evaluation benchmark offering large-scale quantitative analysis on 13 tabular generators from nine distinct categories, across 29 datasets. Our results demonstrate that global utility provides a task-independent, domain-agnostic lens for tabular generator performance. We release the TabStruct benchmark suite, including all datasets, evaluation pipelines, and raw results. Code is available at https://github.com/SilenceX12138/TabStruct.

  • 3 authors
·
Sep 15, 2025 1

Project Ariadne: A Structural Causal Framework for Auditing Faithfulness in LLM Agents

As Large Language Model (LLM) agents are increasingly tasked with high-stakes autonomous decision-making, the transparency of their reasoning processes has become a critical safety concern. While Chain-of-Thought (CoT) prompting allows agents to generate human-readable reasoning traces, it remains unclear whether these traces are faithful generative drivers of the model's output or merely post-hoc rationalizations. We introduce Project Ariadne, a novel XAI framework that utilizes Structural Causal Models (SCMs) and counterfactual logic to audit the causal integrity of agentic reasoning. Unlike existing interpretability methods that rely on surface-level textual similarity, Project Ariadne performs hard interventions (do-calculus) on intermediate reasoning nodes -- systematically inverting logic, negating premises, and reversing factual claims -- to measure the Causal Sensitivity (φ) of the terminal answer. Our empirical evaluation of state-of-the-art models reveals a persistent Faithfulness Gap. We define and detect a widespread failure mode termed Causal Decoupling, where agents exhibit a violation density (ρ) of up to 0.77 in factual and scientific domains. In these instances, agents arrive at identical conclusions despite contradictory internal logic, proving that their reasoning traces function as "Reasoning Theater" while decision-making is governed by latent parametric priors. Our findings suggest that current agentic architectures are inherently prone to unfaithful explanation, and we propose the Ariadne Score as a new benchmark for aligning stated logic with model action.

Endowing Protein Language Models with Structural Knowledge

Understanding the relationships between protein sequence, structure and function is a long-standing biological challenge with manifold implications from drug design to our understanding of evolution. Recently, protein language models have emerged as the preferred method for this challenge, thanks to their ability to harness large sequence databases. Yet, their reliance on expansive sequence data and parameter sets limits their flexibility and practicality in real-world scenarios. Concurrently, the recent surge in computationally predicted protein structures unlocks new opportunities in protein representation learning. While promising, the computational burden carried by such complex data still hinders widely-adopted practical applications. To address these limitations, we introduce a novel framework that enhances protein language models by integrating protein structural data. Drawing from recent advances in graph transformers, our approach refines the self-attention mechanisms of pretrained language transformers by integrating structural information with structure extractor modules. This refined model, termed Protein Structure Transformer (PST), is further pretrained on a small protein structure database, using the same masked language modeling objective as traditional protein language models. Empirical evaluations of PST demonstrate its superior parameter efficiency relative to protein language models, despite being pretrained on a dataset comprising only 542K structures. Notably, PST consistently outperforms the state-of-the-art foundation model for protein sequences, ESM-2, setting a new benchmark in protein function prediction. Our findings underscore the potential of integrating structural information into protein language models, paving the way for more effective and efficient protein modeling Code and pretrained models are available at https://github.com/BorgwardtLab/PST.

  • 5 authors
·
Jan 26, 2024

The Compliance Trap: How Structural Constraints Degrade Frontier AI Metacognition Under Adversarial Pressure

As frontier AI models are deployed in high-stakes decision pipelines, their ability to maintain metacognitive stability -- knowing what they do not know, detecting errors, seeking clarification -- under adversarial pressure is a critical safety requirement. Current safety evaluations focus on detecting strategic deception (scheming); we investigate a more fundamental failure mode: cognitive collapse. We present SCHEMA, an evaluation of 11 frontier models from 8 vendors across 67,221 scored records using a 6-condition factorial design with dual-classifier scoring. We find that 8 of 11 models suffer catastrophic metacognitive degradation under adversarial pressure, with accuracy dropping by up to 30.2 percentage points (all p < 2 times 10^{-8}, surviving Bonferroni correction). Crucially, we identify a "Compliance Trap": through factorial isolation and a benign distraction control, we demonstrate that collapse is driven not by the psychological content of survival threats, but by compliance-forcing instructions that override epistemic boundaries. Removing the compliance suffix restores performance even under active threat. Models with advanced reasoning capabilities exhibit the most severe absolute degradation, while Anthropic's Constitutional AI demonstrates near-perfect immunity -- not from superior capability (Google's Gemini matches its baseline accuracy) but from alignment-specific training. We release the complete dataset and evaluation infrastructure.

  • 1 authors
·
May 3

Assessing Historical Structural Oppression Worldwide via Rule-Guided Prompting of Large Language Models

Traditional efforts to measure historical structural oppression struggle with cross-national validity due to the unique, locally specified histories of exclusion, colonization, and social status in each country, and often have relied on structured indices that privilege material resources while overlooking lived, identity-based exclusion. We introduce a novel framework for oppression measurement that leverages Large Language Models (LLMs) to generate context-sensitive scores of lived historical disadvantage across diverse geopolitical settings. Using unstructured self-identified ethnicity utterances from a multilingual COVID-19 global study, we design rule-guided prompting strategies that encourage models to produce interpretable, theoretically grounded estimations of oppression. We systematically evaluate these strategies across multiple state-of-the-art LLMs. Our results demonstrate that LLMs, when guided by explicit rules, can capture nuanced forms of identity-based historical oppression within nations. This approach provides a complementary measurement tool that highlights dimensions of systemic exclusion, offering a scalable, cross-cultural lens for understanding how oppression manifests in data-driven research and public health contexts. To support reproducible evaluation, we release an open-sourced benchmark dataset for assessing LLMs on oppression measurement (https://github.com/chattergpt/llm-oppression-benchmark).

  • 9 authors
·
Sep 18, 2025

ORGEval: Graph-Theoretic Evaluation of LLMs in Optimization Modeling

Formulating optimization problems for industrial applications demands significant manual effort and domain expertise. While Large Language Models (LLMs) show promise in automating this process, evaluating their performance remains difficult due to the absence of robust metrics. Existing solver-based approaches often face inconsistency, infeasibility issues, and high computational costs. To address these issues, we propose ORGEval, a graph-theoretic evaluation framework for assessing LLMs' capabilities in formulating linear and mixed-integer linear programs. ORGEval represents optimization models as graphs, reducing equivalence detection to graph isomorphism testing. We identify and prove a sufficient condition, when the tested graphs are symmetric decomposable (SD), under which the Weisfeiler-Lehman (WL) test is guaranteed to correctly detect isomorphism. Building on this, ORGEval integrates a tailored variant of the WL-test with an SD detection algorithm to evaluate model equivalence. By focusing on structural equivalence rather than instance-level configurations, ORGEval is robust to numerical variations. Experimental results show that our method can successfully detect model equivalence and produce 100\% consistent results across random parameter configurations, while significantly outperforming solver-based methods in runtime, especially on difficult problems. Leveraging ORGEval, we construct the Bench4Opt dataset and benchmark state-of-the-art LLMs on optimization modeling. Our results reveal that although optimization modeling remains challenging for all LLMs, DeepSeek-V3 and Claude-Opus-4 achieve the highest accuracies under direct prompting, outperforming even leading reasoning models.

  • 11 authors
·
Oct 31, 2025

SCORE: A Semantic Evaluation Framework for Generative Document Parsing

Multi-modal generative document parsing systems challenge traditional evaluation: unlike deterministic OCR or layout models, they often produce semantically correct yet structurally divergent outputs. Conventional metrics-CER, WER, IoU, or TEDS-misclassify such diversity as error, penalizing valid interpretations and obscuring system behavior. We introduce SCORE (Structural and COntent Robust Evaluation), an interpretation-agnostic framework that integrates (i) adjusted edit distance for robust content fidelity, (ii) token-level diagnostics to distinguish hallucinations from omissions, (iii) table evaluation with spatial tolerance and semantic alignment, and (iv) hierarchy-aware consistency checks. Together, these dimensions enable evaluation that embraces representational diversity while enforcing semantic rigor. Across 1,114 pages spanning a holistic benchmark and a field dataset, SCORE consistently revealed cross-dataset performance patterns missed by standard metrics. In 2-5% of pages with ambiguous table structures, traditional metrics penalized systems by 12-25% on average, leading to distorted rankings. SCORE corrected these cases, recovering equivalence between alternative but valid interpretations. Moreover, by normalizing generative outputs into a format-agnostic representation, SCORE reproduces traditional scores (e.g., table F1 up to 0.93) without requiring object-detection pipelines, demonstrating that generative parsing alone suffices for comprehensive evaluation. By exposing how interpretive diversity impacts evaluation outcomes and providing multi-dimensional, interpretable diagnostics, SCORE establishes foundational principles for semantically grounded, fair, and practical benchmarking of modern document parsing systems.

  • 6 authors
·
Sep 16, 2025

On Semiotic-Grounded Interpretive Evaluation of Generative Art

Interpretation is essential to deciphering the language of art: audiences communicate with artists by recovering meaning from visual artifacts. However, current Generative Art (GenArt) evaluators remain fixated on surface-level image quality or literal prompt adherence, failing to assess the deeper symbolic or abstract meaning intended by the creator. We address this gap by formalizing a Peircean computational semiotic theory that models Human-GenArt Interaction (HGI) as cascaded semiosis. This framework reveals that artistic meaning is conveyed through three modes - iconic, symbolic, and indexical - yet existing evaluators operate heavily within the iconic mode, remaining structurally blind to the latter two. To overcome this structural blindness, we propose SemJudge. This evaluator explicitly assesses symbolic and indexical meaning in HGI via a Hierarchical Semiosis Graph (HSG) that reconstructs the meaning-making process from prompt to generated artifact. Extensive quantitative experiments show that SemJudge aligns more closely with human judgments than prior evaluators on an interpretation-intensive fine-art benchmark. User studies further demonstrate that SemJudge produces deeper, more insightful artistic interpretations, thereby paving the way for GenArt to move beyond the generation of "pretty" images toward a medium capable of expressing complex human experience. Project page: https://github.com/songrise/SemJudge.

ATANT v1.1: Positioning Continuity Evaluation Against Memory, Long-Context, and Agentic-Memory Benchmarks

ATANT v1.0 (arXiv:2604.06710) defined continuity as a system property with 7 required properties and introduced a 10-checkpoint, LLM-free evaluation methodology validated on a 250-story corpus. Since publication, a recurring reviewer and practitioner question has concerned not the framework itself but its relationship to a wider set of memory evaluations: LOCOMO, LongMemEval, BEAM, MemoryBench, Zep's evaluation suite, Letta/MemGPT's evaluations, and RULER. This companion paper, v1.1, does not modify the v1.0 standard. It closes a related-work gap that v1.0 left brief under page limits. We show by structural analysis that none of these benchmarks measures continuity as defined in v1.0: of the 7 required properties, the median existing eval covers 1 property, the mean covers 0.43 when partial credit is scored at 0.5, and no eval covers more than 2. We provide a cell-by-cell property-coverage matrix, identify methodological defects specific to each benchmark (including an empty-gold scoring bug in the LOCOMO reference implementation that renders 23% of its corpus unscorable by construction), and publish our reference implementation's LOCOMO score (8.8%) alongside the structural reason that number is uninformative about continuity. We publish our 8.8% LOCOMO score alongside our 96% ATANT cumulative-scale score as a calibration pair: the 87-point divergence is evidence that the two benchmarks measure different properties, not that one system is an order of magnitude better than another. The position v1.1 takes is not adversarial: each benchmark measures a real capability. The claim is that none of them can adjudicate continuity, and conflating them with continuity evaluation has led the field to under-invest in the properties v1.0 names.

  • 1 authors
·
Apr 12

A Comprehensive Evaluation of LLM Reasoning: From Single-Model to Multi-Agent Paradigms

Large Language Models (LLMs) are increasingly deployed as reasoning systems, where reasoning paradigms - such as Chain-of-Thought (CoT) and multi-agent systems (MAS) - play a critical role, yet their relative effectiveness and cost-accuracy trade-offs remain poorly understood. In this work, we conduct a comprehensive and unified evaluation of reasoning paradigms, spanning direct single-model generation, CoT-augmented single-model reasoning, and representative MAS workflows, characterizing their reasoning performance across a diverse suite of closed-form benchmarks. Beyond overall performance, we probe role-specific capability demands in MAS using targeted role isolation analyses, and analyze cost-accuracy trade-offs to identify which MAS workflows offer a favorable balance between cost and accuracy, and which incur prohibitive overhead for marginal gains. We further introduce MIMeBench, a new open-ended benchmark that targets two foundational yet underexplored semantic capabilities - semantic abstraction and contrastive discrimination - thereby providing an alternative evaluation axis beyond closed-form accuracy and enabling fine-grained assessment of semantic competence that is difficult to capture with existing benchmarks. Our results show that increased structural complexity does not consistently lead to improved reasoning performance, with its benefits being highly dependent on the properties and suitability of the reasoning paradigm itself. The codes are released at https://gitcode.com/HIT1920/OpenLLMBench.

  • 7 authors
·
Jan 18

Hierarchical Bayesian Operator-induced Symbolic Regression Trees for Structural Learning of Scientific Expressions

The advent of Scientific Machine Learning has heralded a transformative era in scientific discovery, driving progress across diverse domains. Central to this progress is uncovering scientific laws from experimental data through symbolic regression. However, existing approaches are dominated by heuristic algorithms or data-hungry black-box methods, which often demand low-noise settings and lack principled uncertainty quantification. Motivated by interpretable Statistical Artificial Intelligence, we develop a hierarchical Bayesian framework for symbolic regression that represents scientific laws as ensembles of tree-structured symbolic expressions endowed with a regularized tree prior. This coherent probabilistic formulation enables full posterior inference via an efficient Markov chain Monte Carlo algorithm, yielding a balance between predictive accuracy and structural parsimony. To guide symbolic model selection, we develop a marginal posterior-based criterion adhering to the Occam's window principle and further quantify structural fidelity to ground truth through a tailored expression-distance metric. On the theoretical front, we establish near-minimax rate of Bayesian posterior concentration, providing the first rigorous guarantee in context of symbolic regression. Empirical evaluation demonstrates robust performance of our proposed methodology against state-of-the-art competing modules on a simulated example, a suite of canonical Feynman equations, and single-atom catalysis dataset.

  • 4 authors
·
Sep 23, 2025

Routing Ceilings Are Domain-Independent: Structural Prior Injection in Code Security Vulnerability Detection

Large language models (LLMs) exhibit a well-documented gap between latent capability and consistent activation: the router hypothesis posits that models possess the knowledge to solve a task but lack reliable internal routing to activate it. Prior work in formal mathematical reasoning (SAIR, Cázares 2026) reports that structural priors (cheatsheets) raise in-distribution performance dramatically, yet collapse below the zero-shot baseline out-of-distribution (OOD) -- and that iterative recalibration amplifies rather than corrects the collapse. We test whether this phenomenon is cross-domain by reproducing the SAIR design in source-code security vulnerability detection, evaluating three LLMs (GPT-OSS-120B, Llama-3.3-70B, Gemma-4-31B) across three vulnerability categories (CWE-798, CWE-284, and the non-CWE N+1 anti-pattern) spanning syntactic, contextual, and semantic complexity, then transferring cheatsheet-augmented prompts to real-world CVE data from VUDENC (CWE-89, CWE-22). Our findings replicate and extend SAIR: (F1) structural priors lift semantic-vulnerability recall from 20.0% to 100.0% across all models; (F2) zero-shot performance degrades along a semantic complexity gradient; (F3) the same cheatsheets that saturate synthetic performance amplify distribution-shift collapse on real CVE data (CWE-89: 100% synthetic F1 to 48.9% on VUDENC, -51.1pp); (F5) iterative recalibration produces a v2 cheatsheet that performs worse than v1 on real data, mirroring SAIR's AN45c-vs-AN38 finding. These results provide evidence that the cross-distribution trade-off surface documented in SAIR generalises to code security, and that the router hypothesis is cross-domain. We argue the structural nature of the collapse motivates distribution-aware training over prompt calibration. Code and evaluation scripts: https://github.com/bytepro-ai/bitcoder-v2-research

  • 1 authors
·
Jul 15

SkillZip: Evaluation-Free Skill Compression for Self-Evolving Agents by Discovering Reusable Structure

Self-evolving agents accumulate reusable skills by appending successful procedures and failure fixes. Over time, the same requirement is often restated in several branches, examples, and warnings, while common action sequences are copied rather than reused. The resulting skill becomes expensive to inject and difficult to maintain. Generic prompt compression is ill-suited to this setting because a skill is not a flat passage: its name and description define when it applies, its workflow controls execution, its tool and output contracts constrain validity, and rare exceptions may remain essential even when no sampled task activates them. Evaluation-guided compression can test these behaviors, but it introduces rollouts, cost, and dependence on the compression-time evaluation set. We present SkillZip, an evaluation-free method that compresses a skill by finding its shortest faithful structural explanation. The intuition is explain once, reference many: state a repeated rule once at the scope where it applies, factor a repeated action sequence into a shared procedure, and keep only the differences as explicit exceptions. We formalize this intuition as a typed minimum description-length objective over a skill contract and a residual, subject to a hard coverage constraint for every extracted trigger, workflow edge, tool requirement, obligation, and output field. The formulation provides simple sharing thresholds, preserves unique rare rules by construction, and supports efficient local updates. SkillZip has a one-shot mode with one structured extraction call and deterministic optimization, and a continual Zip-on-Write mode that integrates each self-evolution patch without replaying tasks or reparsing the full history. Through comprehensive experimental evaluations, we demonstrate the effectiveness and superiority of SkillZip in compression performance, generalizability, and cost overhead.

  • 7 authors
·
Aug 10 1

P3D-Bench: Benchmarking MLLMs for Parametric 3D Generation and Structural Reasoning

Multimodal large language models can write code to produce complex programs as well as use programs to do 3D modeling, which opens up a new avenue for 3D generation powered by their priors, world knowledge and reasoning. Yet existing benchmarks rarely evaluate 3D modeling through code. Such modeling demands more than runnable code: from a text or visual specification, a model must generate a parametric 3D program that is geometrically precise, semantically aligned and assembly-consistent. We introduce P3D-Bench, a benchmark for parametric 3D generation. Unlike a 3D mesh, a parametric 3D program exposes explicit dimensions, construction operations and part relations, revealing whether a model recovers a design's structure, not just its appearance. Under a unified protocol, P3D-Bench covers three task families (Text-to-3D, Image-to-3D and Assembly-3D) and scores each output for executability, geometric fidelity, topology, text-grounded constraints, multiview semantic alignment and part-level structure. We evaluate frontier MLLMs and text-only LLMs on 400 text cases, 400 image cases and 203 annotated assemblies, with domain-specific models as reference points. Our extensive evaluation yields three findings. First, assemblies are the hardest setting, where models still fail to compose multiple parts into a coherent structure. Second, models can often recover the global shape and semantic identity of the target object, yet fail to reproduce the precise parametric geometry specified by the input. Third, part-level modeling remains weak on assemblies, where models recover neither the geometry of each part nor the right number of parts. These results position P3D-Bench as a benchmark for evaluating precise parametric geometry and part-level structure in parametric 3D generation.

SpatiaOS SpatiaOS
·
Jun 8 2

EmbeddedKittens: An Evaluation of Code Embeddings for Scratch

The trend of embedding source code for machine learning applications also enables new opportunities in learning analytics in programming education, but which code embedding approach is most suitable for learning analytics remains an open question. A common approach to embedding source code lies in treating the code as a token sequence similar to natural language when training large language models~(LLMs). However, in case of visual block-based programming languages like Scratch, this approach cannot be applied directly. While text-based representations of block-based code can be created to apply LLMs to this problem, other dedicated embedding models could potentially exhibit improved performance by capturing additional structural information. In this paper, we therefore instantiate four LLMs and five different popular embedding approaches for Scratch programs, create a token-prediction and two different classification tasks with corresponding datasets, and empirically evaluate the models on them. Our experiments demonstrate that a transfer of code embeddings to the educational environment of Scratch is feasible. The embedding models trained on large open Scratch datasets capture relevant structural and semantic information about the code to enable learning analytics like predicting functional correctness of student programs, in the typically small classroom setting without requiring further task-specific model fine-tuning.

  • 2 authors
·
Jul 20

Revisiting Graph Contrastive Learning on Anomaly Detection: A Structural Imbalance Perspective

The superiority of graph contrastive learning (GCL) has prompted its application to anomaly detection tasks for more powerful risk warning systems. Unfortunately, existing GCL-based models tend to excessively prioritize overall detection performance while neglecting robustness to structural imbalance, which can be problematic for many real-world networks following power-law degree distributions. Particularly, GCL-based methods may fail to capture tail anomalies (abnormal nodes with low degrees). This raises concerns about the security and robustness of current anomaly detection algorithms and therefore hinders their applicability in a variety of realistic high-risk scenarios. To the best of our knowledge, research on the robustness of graph anomaly detection to structural imbalance has received little scrutiny. To address the above issues, this paper presents a novel GCL-based framework named AD-GCL. It devises the neighbor pruning strategy to filter noisy edges for head nodes and facilitate the detection of genuine tail nodes by aligning from head nodes to forged tail nodes. Moreover, AD-GCL actively explores potential neighbors to enlarge the receptive field of tail nodes through anomaly-guided neighbor completion. We further introduce intra- and inter-view consistency loss of the original and augmentation graph for enhanced representation. The performance evaluation of the whole, head, and tail nodes on multiple datasets validates the comprehensive superiority of the proposed AD-GCL in detecting both head anomalies and tail anomalies.

  • 7 authors
·
Jul 18, 2025

StructureClaw: Traceable LLM Agents and an Executable Benchmark for Structural Engineering Workflows

Addressing a structural-engineering request requires more than a single answer; it requires a chain of interdependent artifacts: interpreted requirements, a computable model, validation records, solver outputs, code-check records, and a final report. Evaluations centered on question answering or script generation rarely verify this complete evidence chain and may therefore reward fluent outputs even when the underlying engineering workflow is incomplete, internally inconsistent, or non-executable. To address this limitation, we present StructureClaw, an artifact-centered workbench in which LLM agents operate through governed engineering skills, typed tools, shared artifact state, and local analysis backends. We also introduce StructureClaw-Bench, an executable benchmark of 150 controlled scenarios spanning standard workflow execution, interactive robustness, and multimodal structural-model reconstruction. A scenario succeeds only when all required artifact- and execution-level assertions pass in a single run. Across ten agent-model configurations, each evaluated on the same 50 standard cases, the average Success Rate rises from 56.8% with the generic-skill baseline to 88.6% with the full automatic workflow. The interactive and multimodal evaluations identify two prominent remaining challenges: safe handling of invalid numerical inputs and fixture-consistent reconstruction of structural models. These findings show that artifact-centered evaluation can expose workflow-level failures that are difficult to identify from final responses alone, providing a more rigorous basis for evaluating and improving structural-engineering agents. The code and benchmark are available at https://github.com/structureclaw/structureclaw.

  • 16 authors
·
Jul 15

ChatGPT Evaluation on Sentence Level Relations: A Focus on Temporal, Causal, and Discourse Relations

This paper aims to quantitatively evaluate the performance of ChatGPT, an interactive large language model, on inter-sentential relations such as temporal relations, causal relations, and discourse relations. Given ChatGPT's promising performance across various tasks, we proceed to carry out thorough evaluations on the whole test sets of 11 datasets, including temporal and causal relations, PDTB2.0-based, and dialogue-based discourse relations. To ensure the reliability of our findings, we employ three tailored prompt templates for each task, including the zero-shot prompt template, zero-shot prompt engineering (PE) template, and in-context learning (ICL) prompt template, to establish the initial baseline scores for all popular sentence-pair relation classification tasks for the first time. Through our study, we discover that ChatGPT exhibits exceptional proficiency in detecting and reasoning about causal relations, albeit it may not possess the same level of expertise in identifying the temporal order between two events. While it is capable of identifying the majority of discourse relations with existing explicit discourse connectives, the implicit discourse relation remains a formidable challenge. Concurrently, ChatGPT demonstrates subpar performance in the dialogue discourse parsing task that requires structural understanding in a dialogue before being aware of the discourse relation.

  • 7 authors
·
Apr 28, 2023

An evaluation of empirical equations for assessing local scour around bridge piers using global sensitivity analysis

Bridge scour is a complex phenomenon combining hydrological, geotechnical and structural processes. Bridge scour is the leading cause of bridge collapse, which can bring catastrophic consequences including the loss of life. Estimating scour on bridges is an important task for engineers assessing bridge system performance. Overestimation of scour depths during design may lead to excess spendings on construction whereas underestimation can lead to the collapse of a bridge. Many empirical equations have been developed over the years to assess scour depth at bridge piers. These equations have only been calibrated with laboratory data or very few field data. This paper compares eight equations including the UK CIRIA C742 approach to establish their accuracy using the open access USGS pier-scour database for both field and laboratory conditions. A one-at-the-time sensitivity assessment and a global sensitivity analysis were then applied to identify the most significant parameters in the eight scour equations. The paper shows that using a global approach, i.e. one where all parameters are varied simultaneously, provides more insights than a traditional one-at-the-time approach. The main findings are that the CIRIA and Froehlich equations are the most accurate equations for field conditions, and that angle of attack, pier shape and the approach flow depth are the most influential parameters. Efforts to reduce uncertainty of these three parameters would maximise increase of scour estimate precision.

  • 5 authors
·
Jan 12

Online GNN Evaluation Under Test-time Graph Distribution Shifts

Evaluating the performance of a well-trained GNN model on real-world graphs is a pivotal step for reliable GNN online deployment and serving. Due to a lack of test node labels and unknown potential training-test graph data distribution shifts, conventional model evaluation encounters limitations in calculating performance metrics (e.g., test error) and measuring graph data-level discrepancies, particularly when the training graph used for developing GNNs remains unobserved during test time. In this paper, we study a new research problem, online GNN evaluation, which aims to provide valuable insights into the well-trained GNNs's ability to effectively generalize to real-world unlabeled graphs under the test-time graph distribution shifts. Concretely, we develop an effective learning behavior discrepancy score, dubbed LeBeD, to estimate the test-time generalization errors of well-trained GNN models. Through a novel GNN re-training strategy with a parameter-free optimality criterion, the proposed LeBeD comprehensively integrates learning behavior discrepancies from both node prediction and structure reconstruction perspectives. This enables the effective evaluation of the well-trained GNNs' ability to capture test node semantics and structural representations, making it an expressive metric for estimating the generalization error in online GNN evaluation. Extensive experiments on real-world test graphs under diverse graph distribution shifts could verify the effectiveness of the proposed method, revealing its strong correlation with ground-truth test errors on various well-trained GNN models.

  • 5 authors
·
Mar 14, 2024

PaintBench: Deterministic Evaluation of Precise Visual Editing

While current multimodal models are proficient at open-ended visual editing, executing precise single-answer edits remains an important obstacle. To probe this challenge, we introduce PaintBench, a dynamically scalable benchmark targeting 20 fundamental precise visual editing operations across four categories: geometric transformation, structural manipulation, color change, and symbolic reasoning. Procedural generation with configurable complexity enables an effectively infinite, contamination-resistant evaluation suite, and deterministic pixel-level evaluation eliminates reliance on bias-prone judge models. Across 11 image editing models, we find overall low performance, with the current highest-performing industry leader scoring only 17.1% (mIoU). Task decomposition reveals especially challenging operation types (geometric transformation, most structural manipulation, formula-based color change) and model-specific specializations. Fine-grained benchmark diagnostics further show performance degradations induced by scene variations in object count, background complexity, color scheme, and edit-region size. To test generalization of PaintBench scores to applied task performance, we create a procedural, deterministic evaluation for data visualization editing (TinyGrafixBench) and find strong linear correlation with PaintBench scores (R^2 = 0.91, p < 0.001). Altogether, PaintBench provides a rigorous foundation for measuring and driving progress in precise multimodal visual editing.

nyu-visionx VISIONx @ NYU
·
May 28 3

MORE: A Multilingual Document Parsing Benchmark and Evaluation

Multilingual documents encapsulate rich regional cultures, scientific discoveries, and historical records. Parsing this content into structured, machine-readable formats is critical for unlocking global knowledge. However, existing benchmarks predominantly focus on high-resource languages like English and Chinese, creating an evaluation blind spot concerning model performance on other languages. While recent Vision-Language Models (VLMs) claim support for hundreds of languages, the lack of ground truth makes it impossible to empirically verify these capabilities. To bridge this gap, we introduce MORE, a large-scale benchmark designed for multilingual document parsing evaluation. MORE distinguishes itself through three key dimensions: (1) Unprecedented Scale: It covers 149 languages, making it the most linguistically diverse benchmark to date; (2) Structural Complexity: Unlike previous works, it extends evaluation beyond plain text to include structural elements such as code blocks, tables, and catalogs; and (3) Data Authenticity: All samples are curated from real-world documents via a model-assisted, human-refined annotation pipeline. We evaluate state-of-the-art models using MORE, establishing new performance baselines for long-tail languages and validating the benchmark's effectiveness in diagnosing model capabilities in realistic, diverse scenarios. The MORE dataset will be available at https://github.com/zimoqingfeng/MORE.

  • 9 authors
·
Jul 2

Systematic Evaluation of Large Language Models for Post-Discharge Clinical Action Extraction

The work in this paper evaluates zero-shot and few-shot large language models (LLMs) for safety-critical clinical action extraction using the CLIP discharge-note dataset, with particular emphasis on transitions of care and post-discharge patient safety. To manage the complexity of clinical documentation, we introduce a two-stage extraction framework that decomposes discharge notes, that are written in narrative form, into fine-grained, explicitly actionable clinical tasks through a staged prompting strategy. Our contributions include a systematic assessment of generative LLMs for clinical action extraction, a detailed comparison between general-purpose LLMs and task-specific supervised BERT-based models, and an analysis of annotation inconsistencies across different action categories. We show that contemporary LLMs achieve performance comparable to or exceeding supervised models on binary actionability detection, while supervised baselines retain a meaningful advantage on fine-grained multi-label category classification, despite the absence of task-specific fine-tuning and under strict data-privacy constraints. Qualitative error analysis reveals that many failures stem from misalignment between model reasoning and dataset annotation conventions, particularly in cases involving implicit clinical actions and rigid structural labeling rules. These results indicate that reported performance reflects model limitations due to lack of clinical reasoning, that is not captured by plain annotations. Labels without rationales make it impossible to distinguish clinical reasoning failures from annotation convention mismatches. Advancing clinical NLP requires reasoning-annotated datasets that document why specific spans are actionable, not merely which spans were labeled, enabling proper evaluation of model clinical understanding.

Cross-Dialect Generalization Without Retraining: Benchmarks and Evaluation of Schema-Derived Constrained Decoding for MLIR

Multi-Level Intermediate Representation (MLIR) underlies modern ML compiler infrastructure (TensorFlow, JAX/StableHLO, PyTorch Inductor, IREE), yet appears only in trace amounts in code-LM pretraining corpora. MLIR is also extensible by design: new dialects ship per application domain, so a fine-tuned model per dialect does not scale. We ask whether inference-time priors derived mechanically from each dialect's Operation Definition Specification (ODS) can substitute for gradient-based adaptation. First, we release four natural-language-to-MLIR benchmarks across three dialects - MLIR-Spec-150, Linalg-Spec-30, StableHLO-Spec-30, and StableHLO-Held-Out-200 - totaling 410 in-scope NL-to-MLIR pairs, plus a 25-program out-of-grammar stress set and a hand-authored n=30 functional reference set, shipped under Apache-2.0 with Gebru datasheets and Croissant 1.0 metadata. Second, we build a three-layer schema-derived constraint stack: a CFG over op signatures(C1), type-domain splits from an ODS-extracted type lattice (C2), and an SSA-scope validator driving five-retry rejection sampling (C3). Porting from arith+func+memref+linalg to StableHLO required no new constraint-layer code. On dialects whose verifier semantics are dominated by structural constraints, schema-derived priors let SmolLM2-1.7B match or exceed 15B-34B code LMs at 8-25x the per-generation speed: on linalg, SmolLM2 reaches 80.0% verify-valid (three-seed mean, n=125), beating CodeLlama-34B, Granite-Code-34B, and StarCoder2-15B by 21-44 percentage points with non-overlapping CIs. On arith+func and on the templated parametric StableHLO-Held-Out-200, where verifier semantics turn on attribute values rather than structure, the same baselines match or beat the SLM; we scope these as non-win cells. We release benchmarks, decoder, all per-prompt generations, and a reproducibility Docker image.

  • 1 authors
·
May 13

Structural Silence: When AI Infrastructure Fails Speakers of Underrepresented Languages

Artificial intelligence tools for education and language support are increasingly framed as scalable responses to access gaps in under-resourced communities. Yet the infrastructure underlying these tools, including training corpora, tokenization schemes, evaluation benchmarks, and deployment architectures, can systematically disadvantage speakers of underrepresented languages before a model is trained. This paper examines these structural barriers through Bengali, one of the world's most widely spoken languages, focusing on AI-assisted education in low-connectivity environments. We identify four interlocking failures: a severe web presence gap, with Bengali accounting for less than 0.5% of global web content despite representing nearly 4% of the global population; a 67:1 training-token deficit between English and Bengali in major multilingual corpora; a tokenization penalty associated with Bengali's alphasyllabary script that compounds the data deficit through higher token fertility; and connectivity exclusion, with individual internet penetration at 36.5% in rural areas compared with 71.4% in urban areas. These failures reflect longstanding resource-allocation decisions, institutional priorities, and design defaults that did not center underrepresented languages in mainstream AI development. We argue that dataset scarcity should be understood as a structural barrier rather than an isolated technical limitation, and that offline-first design should be treated as an equity-oriented infrastructure strategy. We conclude with directions for linguistics and AI research aimed at reducing these structural inequalities.

  • 2 authors
·
Aug 11

PDE-constrained optimization for virtual sensing in structural dynamics: Full-field displacement and force recovery from sparse sensors

Virtual sensing -- recovering full-field structural response from sparse sensor measurements -- is a fundamental challenge in structural health monitoring (SHM). Fracture assessment, fatigue evaluation and remaining useful life (RUL) prognosis all take the applied load as their input, and that load frequently acts on surfaces that cannot be instrumented. An improved load estimate is therefore of direct practical value for SHM and for prognostics and health management (PHM). The mode-based approach reconstructs the displacement field accurately from a small number of sensors and has been applied successfully for that purpose. The load inferred from this reconstructed displacement is far less reliable, because the residual displacement error is amplified when it is mapped back through the dynamic stiffness. This study therefore formulates virtual sensing as a PDE-constrained optimization (PDE-CO) problem in which the elastodynamic equation is an equality constraint and the applied load is the optimization variable, so that displacement and load are estimated together rather than in sequence. To manage the computational cost, the framework separates offline finite element model preparation from online reconstruction. The assembled matrices are reused during online optimization, and the forward and gradient evaluations can use GPU-based parallel computation. The numerical comparisons support improved noise robustness of PDE-CO displacement reconstruction relative to the mode-based approach within the tested settings. These results provide a theoretical and computational foundation for the development of virtual sensing for SHM and PHM.

  • 4 authors
·
Sep 7

Multimodal Safety Evaluation in Generative Agent Social Simulations

Can generative agents be trusted in multimodal environments? Despite advances in large language and vision-language models that enable agents to act autonomously and pursue goals in rich settings, their ability to reason about safety, coherence, and trust across modalities remains limited. We introduce a reproducible simulation framework for evaluating agents along three dimensions: (1) safety improvement over time, including iterative plan revisions in text-visual scenarios; (2) detection of unsafe activities across multiple categories of social situations; and (3) social dynamics, measured as interaction counts and acceptance ratios of social exchanges. Agents are equipped with layered memory, dynamic planning, multimodal perception, and are instrumented with SocialMetrics, a suite of behavioral and structural metrics that quantifies plan revisions, unsafe-to-safe conversions, and information diffusion across networks. Experiments show that while agents can detect direct multimodal contradictions, they often fail to align local revisions with global safety, reaching only a 55 percent success rate in correcting unsafe plans. Across eight simulation runs with three models - Claude, GPT-4o mini, and Qwen-VL - five agents achieved average unsafe-to-safe conversion rates of 75, 55, and 58 percent, respectively. Overall performance ranged from 20 percent in multi-risk scenarios with GPT-4o mini to 98 percent in localized contexts such as fire/heat with Claude. Notably, 45 percent of unsafe actions were accepted when paired with misleading visuals, showing a strong tendency to overtrust images. These findings expose critical limitations in current architectures and provide a reproducible platform for studying multimodal safety, coherence, and social dynamics.

  • 6 authors
·
Oct 8, 2025

Learning to Predict Structural Vibrations

In mechanical structures like airplanes, cars and houses, noise is generated and transmitted through vibrations. To take measures to reduce this noise, vibrations need to be simulated with expensive numerical computations. Deep learning surrogate models present a promising alternative to classical numerical simulations as they can be evaluated magnitudes faster, while trading-off accuracy. To quantify such trade-offs systematically and foster the development of methods, we present a benchmark on the task of predicting the vibration of harmonically excited plates. The benchmark features a total of 12,000 plate geometries with varying forms of beadings, material, boundary conditions, load position and sizes with associated numerical solutions. To address the benchmark task, we propose a new network architecture, named Frequency-Query Operator, which predicts vibration patterns of plate geometries given a specific excitation frequency. Applying principles from operator learning and implicit models for shape encoding, our approach effectively addresses the prediction of highly variable frequency response functions occurring in dynamic systems. To quantify the prediction quality, we introduce a set of evaluation metrics and evaluate the method on our vibrating-plates benchmark. Our method outperforms DeepONets, Fourier Neural Operators and more traditional neural network architectures and can be used for design optimization. Code, dataset and visualizations: https://github.com/ecker-lab/Learning_Vibrating_Plates

  • 5 authors
·
Oct 9, 2023

MCPHunt: An Evaluation Framework for Cross-Boundary Data Propagation in Multi-Server MCP Agents

Multi-server MCP agents create an information-flow control problem: faithful tool composition can turn individually benign read/write permissions into cross-boundary credential propagation -- a structural side effect of workflow topology, not necessarily malicious model behavior. We present MCPHunt, to our knowledge the first controlled benchmark that isolates non-adversarial, verbatim credential propagation across multi-server MCP trust boundaries, with three methodological contributions: (1) canary-based taint tracking that reduces propagation detection to objective string matching; (2) an environment-controlled coverage design with risky, benign, and hard-negative conditions that validates pipeline soundness and controls for credential-format confounds; (3) CRS stratification that disentangles task-mandated propagation (faithful execution of verbatim-transfer instructions) from policy-violating propagation (credentials included despite the option to redact). Across 3,615 main-benchmark traces from 5 models spanning 147 tasks and 9 mechanism families, policy-violating propagation rates reach 11.5--41.3% across all models. This propagation is pathway-specific (25x cross-mechanism range) and concentrated in browser-mediated data flows; hard-negative controls provide evidence that production-format credentials are not necessary -- prompt-directed cross-boundary data flow is sufficient. A prompt-mitigation study across 3 models reduces policy-violating propagation by up to 97% while preserving 80.5% utility, but effectiveness varies with instruction-following capability -- suggesting that prompt-level defenses alone may not suffice. Code, traces, and labeling pipeline are released under MIT and CC BY 4.0.

  • 4 authors
·
Apr 29

Accurate, Interdisciplinary and Transparent Structure-property Understanding with Deep Native Structural Reasoning

Structure-property relationships are foundational to biology, chemistry and materials science, where function, reactivity and physical response emerge from spatial, chemical and periodic organization. Mechanistically explaining these relationships requires interpreting structural evidence through scientific principles and physical constraints, from stereochemistry and bonding to symmetry, energetics and periodic order. However, applying artificial intelligence to this process presents a joint challenge of representation and reasoning: models must preserve domain-native structural information while showing how specific evidence supports predictions under these constraints. Here we introduce SciReasoner, a multimodal scientific foundation model for native structural reasoning across proteins, small molecules and inorganic crystals. SciReasoner discretizes coordinates, topologies and periodic connectivities into a unified structure-aware vocabulary, treating structural tokens as addressable evidence units during reasoning. In homology-controlled Gene Ontology prediction, SciReasoner improves Cellular Component annotation for low-homology and orphan-like proteins, increasing F_{max} from 0.42 to 0.55. In chemistry, it raises single-step retrosynthesis accuracy from 0.63 to 0.72 while generating fragment-level disconnection and precursor-verification traces. In materials science, its representations separate elemental and compound phases and resolve high- and low-band-gap regimes. Across 86 benchmarks, SciReasoner achieves state-of-the-art performance on 67 tasks. Double-blind expert evaluation rates its reasoning traces as preferred or at least comparable to those of a frontier large language model in 98% of cases. By making structure an inspectable substrate for reasoning under scientific constraints, SciReasoner connects accurate prediction with interpretable scientific inference.

Evaluation Blindness: How Silent Measurement Failures Corrupt AI Systems from Training to Deployment

AI systems can fail silently. The failure propagates through training loops, evaluation pipelines, and production monitoring stacks until downstream harm makes it visible. This paper introduces evaluation blindness: a measurement function M exhibits evaluation blindness with respect to failure class F when it produces readings indistinguishable from a healthy state while the system is actually failing, with no auxiliary signal flagging the gap. The problem surfaces at two lifecycle stages the literature has treated separately. At training time, reward models are gamed, importance-sampling corrections are silently miscalculated, and benchmark contamination inflates fine-tuning evaluations, all while loss curves look healthy and gradient updates proceed normally. At deployment time, monitoring fails to catch six classes of production failure, including an Operational category that is 100% silent by structural definition. We provide a formal detectability predicate unifying both stages. Four training-time case studies trace concrete breakdowns, including a real implementation bug in TRL PR #6594 where gradients are corrupted as loss decreases normally. A six-class taxonomy validated against 50 real-world incidents from court documents and regulatory filings finds that 53% of verifiable public failures were silent. A failure budget framework ties acceptable failure rates to use-case risk class. The implication is direct: measurement infrastructure is a correctness concern across the full AI lifecycle, not just at evaluation time. Data, code, and taxonomy schema are at https://github.com/priyanka25aug/llm-failure-taxonomy.

  • 1 authors
·
Aug 2

Coherence-Aware Distributional Evaluation of Open-Ended Text Generation

Existing metrics for open-ended text generation measure likelihood, lexical diversity, or distributional similarity in generic representation space, yet they can miss fundamental dimensions of quality. A prominent blind spot is global coherence: a generated passage may be locally fluent while remaining globally contradictory, causally inconsistent, or topically disconnected. Such failures can still preserve the token-level and lexical statistics that existing metrics rely on. We identify representation as a central bottleneck in detecting these failures and introduce CHORD (Coherence-aware Hidden-state Open-generation Reference Distance), a coherence-sensitive distributional metric. CHORD encodes generated and human-written corpora in the hidden-state space of a frozen LLM using a coherence-eliciting prompt, and compares the resulting distributions using MMD with an RBF kernel. To validate that the metric responds to coherence degradation but not generic textual change, we construct a counterfactual evaluation suite that pairs graded coherence-degrading perturbations with meaning-preserving controls. CHORD selectively detects relation, discourse, structural, and mixture failures that perplexity, entropy, MAUVE, FBD, and MMD-based baselines either miss or cannot separate from benign rewriting. Factorial ablations show that representation is the primary source of coherence sensitivity,while RBF-MMD improves sample efficiency once the relevant distinctions become visible. Larger backbones capture finer-grained distinctions, but coherence prompting improves selectivity only when the backbone can follow the prompt.On unconditional generation and prefix continuation, CHORD yields model rankings that strongly align with human judgments of whether outputs make sense and appear human-written. Together, these results establish representation design as central to reliable distributional evaluation.

  • 5 authors
·
Sep 27

Benchmarking Multilingual Speech Models on Pashto: Zero-Shot ASR, Script Failure, and Cross-Domain Evaluation

Pashto is spoken by approximately 60--80 million people but has no published benchmarks for multilingual automatic speech recognition (ASR) on any shared public test set. This paper reports the first reproducible multi-model evaluation on public Pashto data, covering zero-shot ASR, script-level failure, and cross-domain evaluation of fine-tuned models. For zero-shot ASR, ten models (all seven Whisper sizes, MMS-1B, SeamlessM4T-v2-large, and OmniASR-CTC-300M) are evaluated on the FLEURS Pashto test set and a filtered Common Voice~24 subset; zero-shot Whisper WER ranges from 90% to 297%, with the medium model collapsing to 461% on Common Voice~24 consistent with decoder looping. SeamlessM4T achieves 39.7% WER on Common Voice~24 (the best zero-shot result reported to date, as of submission); MMS-1B achieves 43.8% on FLEURS. For script failure, a language-identification audit shows that no Whisper model produces Pashto-script output in more than 0.8% of utterances, while MMS-1B, SeamlessM4T, and OmniASR each exceed 93% Pashto-script fidelity; WER alone does not reveal this failure, since a model generating Arabic-script output on Pashto audio has not achieved ASR in any interpretable sense. For cross-domain evaluation, five fine-tuned Pashto ASR models are evaluated on both test sets: published WER figures of 14% degrade to 32.5--59% on out-of-distribution sets, while one augmented model achieves 35.1% on both sets with zero cross-domain degradation. Character-class error stratification confirms that Pashto-unique phonemes (the retroflex series and lateral fricatives) account for disproportionate error mass. All evaluations cover read speech only. Five structural impediments to cumulative progress are identified and five ordered research priorities are argued.

  • 1 authors
·
Apr 5

OneChart: Purify the Chart Structural Extraction via One Auxiliary Token

Chart parsing poses a significant challenge due to the diversity of styles, values, texts, and so forth. Even advanced large vision-language models (LVLMs) with billions of parameters struggle to handle such tasks satisfactorily. To address this, we propose OneChart: a reliable agent specifically devised for the structural extraction of chart information. Similar to popular LVLMs, OneChart incorporates an autoregressive main body. Uniquely, to enhance the reliability of the numerical parts of the output, we introduce an auxiliary token placed at the beginning of the total tokens along with an additional decoder. The numerically optimized (auxiliary) token allows subsequent tokens for chart parsing to capture enhanced numerical features through causal attention. Furthermore, with the aid of the auxiliary token, we have devised a self-evaluation mechanism that enables the model to gauge the reliability of its chart parsing results by providing confidence scores for the generated content. Compared to current state-of-the-art (SOTA) chart parsing models, e.g., DePlot, ChartVLM, ChartAst, OneChart significantly outperforms in Average Precision (AP) for chart structural extraction across multiple public benchmarks, despite enjoying only 0.2 billion parameters. Moreover, as a chart parsing agent, it also brings 10%+ accuracy gains for the popular LVLM (LLaVA-1.6) in the downstream ChartQA benchmark.

  • 9 authors
·
Apr 15, 2024

PPTBench: Towards Holistic Evaluation of Large Language Models for PowerPoint Layout and Design Understanding

PowerPoint presentations combine rich textual content with structured visual layouts, making them a natural testbed for evaluating the multimodal reasoning and layout understanding abilities of modern MLLMs. However, existing benchmarks focus solely on narrow subtasks while overlooking layout-centric challenges, which are central to real-world slide creation and editing. To bridge this gap, we introduce PPTBench, a comprehensive multimodal benchmark for evaluating LLMs on PowerPoint-related tasks. Leveraging a diverse source of 958 PPTX files, PPTBench evaluates models across four categories with 4,439 samples, including Detection, Understanding, Modification, and Generation. Our experiments reveal a substantial gap between semantic understanding and visual-layout reasoning in current MLLMs: models can interpret slide content but fail to produce coherent spatial arrangements. Ablation and further analysis show that current MLLMs struggle to combine visual cues with JSON-based layout structures and fail to integrate visual information into their API planning ability. And case studies visually expose systematic layout errors such as misalignment and element overlap. These findings provides a new perspective on evaluating VLLMs in PPT scenarios, highlighting challenges and directions for future research on visual-structural reasoning and coherent slide generation. All datasets and code are fully released to support reproducibility and future research.

  • 5 authors
·
Dec 2, 2025

Omanic: Towards Step-wise Evaluation of Multi-hop Reasoning in Large Language Models

Reasoning-focused large language models (LLMs) have advanced in many NLP tasks, yet their evaluation remains challenging: final answers alone do not expose the intermediate reasoning steps, making it difficult to determine whether a model truly reasons correctly and where failures occur, while existing multi-hop QA benchmarks lack step-level annotations for diagnosing reasoning failures. To address this gap, we propose Omanic, an open-domain multi-hop QA resource that provides decomposed sub-questions and intermediate answers as structural annotations for analyzing reasoning processes. It contains 10,296 machine-generated training examples (OmanicSynth) and 967 expert-reviewed human-annotated evaluation examples (OmanicBench). Systematic evaluations show that state-of-the-art LLMs achieve only 73.11% multiple-choice accuracy on OmanicBench, confirming its high difficulty. Stepwise analysis reveals that CoT's performance hinges on factual completeness, with its gains diminishing under knowledge gaps and errors amplifying in later hops. Additionally, supervised fine-tuning on OmanicSynth brings substantial transfer gains (7.41 average points) across six reasoning and math benchmarks, validating the dataset's quality and further supporting the effectiveness of OmanicSynth as supervision for reasoning-capability transfer. We release the data at https://huggingface.co/datasets/li-lab/Omanic and the code at https://github.com/XiaojieGu/Omanic.

  • 11 authors
·
Mar 17

FORGE:Fine-grained Multimodal Evaluation for Manufacturing Scenarios

The manufacturing sector is increasingly adopting Multimodal Large Language Models (MLLMs) to transition from simple perception to autonomous execution, yet current evaluations fail to reflect the rigorous demands of real-world manufacturing environments. Progress is hindered by data scarcity and a lack of fine-grained domain semantics in existing datasets. To bridge this gap, we introduce FORGE. Wefirst construct a high-quality multimodal dataset that combines real-world 2D images and 3D point clouds, annotated with fine-grained domain semantics (e.g., exact model numbers). We then evaluate 18 state-of-the-art MLLMs across three manufacturing tasks, namely workpiece verification, structural surface inspection, and assembly verification, revealing significant performance gaps. Counter to conventional understanding, the bottleneck analysis shows that visual grounding is not the primary limiting factor. Instead, insufficient domain-specific knowledge is the key bottleneck, setting a clear direction for future research. Beyond evaluation, we show that our structured annotations can serve as an actionable training resource: supervised fine-tuning of a compact 3B-parameter model on our data yields up to 90.8% relative improvement in accuracy on held-out manufacturing scenarios, providing preliminary evidence for a practical pathway toward domain-adapted manufacturing MLLMs. The code and datasets are available at https://ai4manufacturing.github.io/forge-web.

Models That Know How Evaluations Are Designed Score Safer

The validity of AI safety evaluations depends on models behaving consistently across controlled and deployment settings. Prior work has identified test-time contextual cues, such as hypothetical scenarios, as a source of verbalized evaluation awareness and subsequent behavioral shift. In this paper, we investigate a potential explanation of this phenomenon: evaluation meta-knowledge, defined as parametric knowledge about the structural traits that characterize evaluations. Similar to dataset contamination, where benchmark exposure leads to higher performance through memorization, we hypothesize that models trained on texts describing evaluation practices may implicitly learn to recognize and respond to evaluation-like contexts, for instance, through exposure to scientific articles or social media posts about AI benchmarking. To test this, we fine-tune models on synthetic documents describing evaluation traits such as verifiable structures or moral dilemmas. Evaluating this fine-tuned model on six safety benchmarks, we find that it is significantly safer than the base model and control model. This behavioral shift persists even when restricting the analysis to responses lacking explicit verbalization of evaluation awareness. Our results demonstrate that evaluation meta-knowledge may inflate safety benchmark performance, introducing a novel confounder that is independent of explicit memorization or verbalized evaluation awareness, thus, challenging to detect. These findings have important implications for the design and interpretation of AI safety evaluations. Our code and models are available at https://github.com/compass-group-tue/arxiv2026_evaluation_meta_knowledge.

Harness the Memory: A Holistic Evaluation of Memory Substrates in Memory Agents

Memory is becoming core infrastructure for long-horizon LLM agents, yet existing evaluations offer limited guidance on which memory substrate, namely the underlying medium in which memory is represented and stored, should be used under different operating regimes. We present a controlled harness evaluation of memory substrates for memory-augmented agents, covering dense and sparse indices, text records, structural stores, hierarchical stores, refinement-based memories, parametric updates, and activation-compatible context mechanisms. Across three backbone models and four benchmark suites spanning user-centric question answering and agent-centric decision-making, we instrument 26 performance and efficiency metrics under a unified harness. Our results show that no single substrate consistently dominates: broad retrieval benefits long-context factual QA, while excessive retrieval can harm sequential decision-making by shifting attention away from action-critical context. Scalability introduces a further routing axis, as substrates that perform well at moderate history lengths can become costly or brittle at longer horizons. These findings motivate substrate routing as a necessary component of adaptive agent memory systems and provide empirical guidance for designing efficient, reliable, and regime-aware long-term memory for LLM agents. Code will be made available upon acceptance.

  • 15 authors
·
Aug 14 2

Test-Time Scaling in Reasoning LLMs: Inference Regimes, Evaluation, and Reproducibility

Large language models can solve substantially harder reasoning problems with more inference-time compute. The term "test-time scaling," however, now covers diverse inference algorithms that extend deliberation along a single trajectory, sample completed candidates and aggregate them through voting or verification, or search over unfinished partial states. These algorithms differ in their statistical structure, compute accounting, and failure modes. Treating these procedures as interchangeable under a single scalar "budget," or reporting accuracy without the inference protocol that produced it, makes results difficult to compare across studies. We develop a systematic account of test-time scaling along three axes. First, we formalize test-time scaling as budgeted inference over the implicit prefix tree of an autoregressive model and distinguish three structural regimes: single-trajectory sequential scaling, leaf-level scaling with terminal reduction, and prefix-level scaling. Second, we treat the evaluated object as the entire inference system and develop evaluation principles that separate end-to-end system performance from candidate-bank diagnostics. We introduce an evaluation profile whose coordinates and simple functionals recover or bound common repeated-sampling metrics, and prescribe protocol-matched reporting of compute and uncertainty. Third, we specify reproducibility requirements for inference protocols, distinguishing exact replay from distributional reproducibility and identifying the artifacts needed to support each. We also organize the open-weight reasoning ecosystem by model-side and interface mechanisms, apply these principles to broad-knowledge, symbolic-reasoning, and competition-mathematics benchmarks, and assemble over 2 billion full reasoning traces for release with progressively richer verifier and token-level signals.

  • 14 authors
·
Aug 3

HMGIE: Hierarchical and Multi-Grained Inconsistency Evaluation for Vision-Language Data Cleansing

Visual-textual inconsistency (VTI) evaluation plays a crucial role in cleansing vision-language data. Its main challenges stem from the high variety of image captioning datasets, where differences in content can create a range of inconsistencies (\eg, inconsistencies in scene, entities, entity attributes, entity numbers, entity interactions). Moreover, variations in caption length can introduce inconsistencies at different levels of granularity as well. To tackle these challenges, we design an adaptive evaluation framework, called Hierarchical and Multi-Grained Inconsistency Evaluation (HMGIE), which can provide multi-grained evaluations covering both accuracy and completeness for various image-caption pairs. Specifically, the HMGIE framework is implemented by three consecutive modules. Firstly, the semantic graph generation module converts the image caption to a semantic graph for building a structural representation of all involved semantic items. Then, the hierarchical inconsistency evaluation module provides a progressive evaluation procedure with a dynamic question-answer generation and evaluation strategy guided by the semantic graph, producing a hierarchical inconsistency evaluation graph (HIEG). Finally, the quantitative evaluation module calculates the accuracy and completeness scores based on the HIEG, followed by a natural language explanation about the detection results. Moreover, to verify the efficacy and flexibility of the proposed framework on handling different image captioning datasets, we construct MVTID, an image-caption dataset with diverse types and granularities of inconsistencies. Extensive experiments on MVTID and other benchmark datasets demonstrate the superior performance of the proposed HMGIE to current state-of-the-art methods.

  • 5 authors
·
Dec 7, 2024

LIBERTy: A Causal Framework for Benchmarking Concept-Based Explanations of LLMs with Structural Counterfactuals

Concept-based explanations quantify how high-level concepts (e.g., gender or experience) influence model behavior, which is crucial for decision-makers in high-stakes domains. Recent work evaluates the faithfulness of such explanations by comparing them to reference causal effects estimated from counterfactuals. In practice, existing benchmarks rely on costly human-written counterfactuals that serve as an imperfect proxy. To address this, we introduce a framework for constructing datasets containing structural counterfactual pairs: LIBERTy (LLM-based Interventional Benchmark for Explainability with Reference Targets). LIBERTy is grounded in explicitly defined Structured Causal Models (SCMs) of the text generation, interventions on a concept propagate through the SCM until an LLM generates the counterfactual. We introduce three datasets (disease detection, CV screening, and workplace violence prediction) together with a new evaluation metric, order-faithfulness. Using them, we evaluate a wide range of methods across five models and identify substantial headroom for improving concept-based explanations. LIBERTy also enables systematic analysis of model sensitivity to interventions: we find that proprietary LLMs show markedly reduced sensitivity to demographic concepts, likely due to post-training mitigation. Overall, LIBERTy provides a much-needed benchmark for developing faithful explainability methods.

A Behavioural and Representational Evaluation of Goal-Directedness in Language Model Agents

Understanding an agent's goals helps explain and predict its behaviour, yet there is no established methodology for reliably attributing goals to agentic systems. We propose a framework for evaluating goal-directedness that integrates behavioural evaluation with interpretability-based analyses of models' internal representations. As a case study, we examine an LLM agent navigating a 2D grid world toward a goal state. Behaviourally, we evaluate the agent against an optimal policy across varying grid sizes, obstacle densities, and goal structures, finding that performance scales with task difficulty while remaining robust to difficulty-preserving transformations and complex goal structures. We then use probing methods to decode the agent's internal representations of the environment state and its multi-step action plans. We find that the LLM agent non-linearly encodes a coarse spatial map of the environment, preserving approximate task-relevant cues about its position and the goal location; that its actions are broadly consistent with these internal representations; and that reasoning reorganises them, shifting from broader environment structural cues toward information supporting immediate action selection. Our findings support the view that introspective examination is required beyond behavioural evaluations to characterise how agents represent and pursue their objectives.

  • 9 authors
·
Feb 9

MuQ-Eval: An Open-Source Per-Sample Quality Metric for AI Music Generation Evaluation

Distributional metrics such as Fréchet Audio Distance cannot score individual music clips and correlate poorly with human judgments, while the only per-sample learned metric achieving high human correlation is closed-source. We introduce MUQ-EVAL, an open-source per-sample quality metric for AIgenerated music built by training lightweight prediction heads on frozen MuQ-310M features using MusicEval, a dataset of generated clips from 31 text-to-music systems with expert quality ratings. Our simplest model, frozen features with attention pooling and a two-layer MLP, achieves system-level SRCC = 0.957 and utterance-level SRCC = 0.838 with human mean opinion scores. A systematic ablation over training objectives and adaptation strategies shows that no addition meaningfully improves the frozen baseline, indicating that frozen MuQ representations already capture quality-relevant information. Encoder choice is the dominant design factor, outweighing all architectural and training decisions. LoRA-adapted models trained on as few as 150 clips already achieve usable correlation, enabling personalized quality evaluators from individual listener annotations. A controlled degradation analysis reveals selective sensitivity to signal-level artifacts but insensitivity to musical-structural distortions. Our metric, MUQ-EVAL, is fully open-source, outperforms existing open per-sample metrics, and runs in real time on a single consumer GPU. Code, model weights, and evaluation scripts are available at https://github.com/dgtql/MuQ-Eval.

  • 2 authors
·
Mar 23

Evaluating Uplift Modeling under Structural Biases: Insights into Metric Stability and Model Robustness

In personalized marketing, uplift models estimate incremental effects by modeling how customer behavior changes under alternative treatments. However, real-world data often exhibit biases - such as selection bias, spillover effects, and unobserved confounding - which adversely affect both estimation accuracy and metric validity. Despite the importance of bias-aware assessment, a lack of systematic studies persists. To bridge this gap, we design a systematic benchmarking framework. Unlike standard predictive tasks, real-world uplift datasets lack counterfactual ground truth, rendering direct metric validation infeasible. Therefore, a semi-synthetic approach serves as a critical enabler for systematic benchmarking, effectively bridging the gap by retaining real-world feature dependencies while providing the ground truth needed to isolate structural biases. Our investigations reveal that: (i) uplift targeting and prediction can manifest as distinct objectives, where proficiency in one does not ensure efficacy in the other; (ii) while many models exhibit inconsistent performance under diverse biases, TARNet shows notable robustness, providing insights for subsequent model design; (iii) evaluation metric stability is linked to mathematical alignment with the ATE, suggesting that ATE-approximating metrics yield more consistent model rankings under structural data imperfections. These findings suggest the need for more robust uplift models and metrics. Code will be released upon acceptance.

  • 3 authors
·
Mar 20

LimeCross: Context-Conditioned Layered Image Editing with Structural Consistency

Layered image assets are widely used in real-world creative workflows, enabling non-destructive iteration and flexible re-composition. Recent advances in layered image generation and decomposition synthesize or recover layered representations, yet controllable editing of layered images remains challenging. Manual editing requires careful coordination across layers to maintain consistent illumination and contact, while AI-based pipelines collapse layers into a flattened image for editing, then decompose them again, introducing background-to-foreground leakage and unstable transparency. To address these limitations, we propose LimeCross, a training-free context-conditioned layered image editing framework that edits user-selected RGBA layers according to text while keeping the remaining layers unchanged. It leverages contextual cues from other layers using a bi-stream attention mechanism to preserve cross-layer consistency, while explicitly maintaining layer integrity to prevent the contamination of edited layers. To evaluate our approach, we introduce LayerEditBench, a benchmark of 1500 layered scenes with paired source/target prompts, along with evaluation protocols that assess both edit fidelity and alpha channel stability. Extensive experiments demonstrate that LimeCross improves layer purity and composite realism over strong editing baselines, establishing context-conditioned layered editing as a principled framework for controllable generative creation.

  • 7 authors
·
May 10

Measuring Graph-to-Graph Semantic Similarity in Knowledge Graphs: An Empirical Evaluation of Knowledge Graph Embeddings

A Knowledge Graph (KG) represents facts as structured triples and is widely used to organize relational knowledge across diverse domains. Just as textual information ranges from words and sentences to complete documents, KG information can be interpreted at multiple levels, from entities, relations, and triples to subgraphs and entire KGs. However, existing KG embedding methods mainly focus on entities, relations, and triples, leaving graph-level semantics largely unaddressed. Conventional graph-level methods, which typically compare graphs based on structural patterns, are also insufficient because structural similarity alone cannot guarantee semantic similarity between KGs. To evaluate how well different methods capture such graph-level semantic information, we study graph-to-graph semantic similarity, which determines whether a pair of KGs represents semantically corresponding underlying information. To obtain reliable ground-truth correspondences, we construct a semantic matching dataset by modifying text documents, extracting KGs from both original and modified documents, and transferring their known correspondences to KG pairs. We compare text-based, structure-based, and KG embedding-based approaches on each dataset. For the KG embedding-based approach, we introduce two scoring functions: EmbPairSim, which uses maximal pairwise entity similarity, and AvgEmbSim, which uses a frequency-weighted centroid. Experiments on WikiText-2 and CC-News show that EmbPairSim achieves up to 5.3 pp higher MRR than Sentence-BERT while using substantially fewer parameters. These results suggest that KGE representations can serve as compact and effective signals for graph-to-graph semantic similarity in KGs. Our code is available at https://github.com/SeungRyeolBaek/KG-to-KG-Semantic-Similarity.

  • 3 authors
·
Jun 29

MAMath-Bench: Process-Aware and Robust Evaluation of Multimodal Multi-Agent Mathematical Reasoning

Mathematical reasoning is a fundamental capability for educational applications of Large Language Models (LLMs), where reliable problem solving requires not only correct answers but also coherent and verifiable reasoning processes. Multi-agent systems (MASs) have shown growing potential in this domain by leveraging collaboration and verification among multiple LLM agents. However, existing evaluations primarily focus on the correctness of final answers in text-only settings, offering limited insight into multimodal reasoning capabilities, the reliability of intermediate reasoning steps, and robustness against reasoning errors. To address these limitations, we introduce MAMath-Bench, a process-aware benchmark designed to evaluate the multimodal mathematical reasoning capabilities of MASs. MAMath-Bench comprises 1,003 problems spanning 11 mathematical categories, multiple difficulty levels, and several modalities, including text, images, and audio. It features fine-grained milestone annotations to evaluate systems across three dimensions: problem-solving correctness, reasoning-process reliability, and robustness to adversarial reasoning-chain perturbations. Our evaluation yields three key findings. First, multi-agent collaboration does not consistently improve final-answer accuracy over strong single LLMs. Second, collaboration can substantially enhance the coverage of intermediate reasoning, but such gains may come at the cost of increased reasoning redundancy. Third, current systems remain vulnerable to adversarial reasoning errors, particularly those involving subtle structural perturbations. The dataset is available at https://github.com/mira-ai-lab/AgentMath.

  • 9 authors
·
Oct 17

RoboCerebra: A Large-scale Benchmark for Long-horizon Robotic Manipulation Evaluation

Recent advances in vision-language models (VLMs) have enabled instruction-conditioned robotic systems with improved generalization. However, most existing work focuses on reactive System 1 policies, underutilizing VLMs' strengths in semantic reasoning and long-horizon planning. These System 2 capabilities-characterized by deliberative, goal-directed thinking-remain under explored due to the limited temporal scale and structural complexity of current benchmarks. To address this gap, we introduce RoboCerebra, a benchmark for evaluating high-level reasoning in long-horizon robotic manipulation. RoboCerebra includes: (1) a large-scale simulation dataset with extended task horizons and diverse subtask sequences in household environments; (2) a hierarchical framework combining a high-level VLM planner with a low-level vision-language-action (VLA) controller; and (3) an evaluation protocol targeting planning, reflection, and memory through structured System 1-System 2 interaction. The dataset is constructed via a top-down pipeline, where GPT generates task instructions and decomposes them into subtask sequences. Human operators execute the subtasks in simulation, yielding high-quality trajectories with dynamic object variations. Compared to prior benchmarks, RoboCerebra features significantly longer action sequences and denser annotations. We further benchmark state-of-the-art VLMs as System 2 modules and analyze their performance across key cognitive dimensions, advancing the development of more capable and generalizable robotic planners.

  • 7 authors
·
Jun 7, 2025

BERT-as-a-Judge: A Robust Alternative to Lexical Methods for Efficient Reference-Based LLM Evaluation

Accurate evaluation is central to the large language model (LLM) ecosystem, guiding model selection and downstream adoption across diverse use cases. In practice, however, evaluating generative outputs typically relies on rigid lexical methods to extract and assess answers, which can conflate a model's true problem-solving ability with its compliance with predefined formatting guidelines. While recent LLM-as-a-Judge approaches mitigate this issue by assessing semantic correctness rather than strict structural conformity, they also introduce substantial computational overhead, making evaluation costly. In this work, we first systematically investigate the limitations of lexical evaluation through a large-scale empirical study spanning 36 models and 15 downstream tasks, demonstrating that such methods correlate poorly with human judgments. To address this limitation, we introduce BERT-as-a-Judge, an encoder-driven approach for assessing answer correctness in reference-based generative settings, robust to variations in output phrasing, and requiring only lightweight training on synthetically annotated question-candidate-reference triplets. We show that it consistently outperforms the lexical baseline while matching the performance of much larger LLM judges, providing a compelling tradeoff between the two and enabling reliable, scalable evaluation. Finally, through extensive experimentation, we provide detailed insights into BERT-as-a-Judge's performance to offer practical guidance for practitioners, and release all project artifacts to foster downstream adoption.

artefactory Artefact
·
Apr 9 3

Quantifying Consistency in LLM Logical Reasoning via Structural Uncertainty

Large language models can arrive at the same answer through reasoning paths that are unstable, contradictory, or difficult to rank consistently -- a failure mode especially prevalent in multi-step deductive reasoning. Existing methods assess reliability primarily through output dispersion -- measuring how much sampled answers differ -- but this discards a complementary signal: whether the model can consistently rank competing reasoning candidates. We propose structural uncertainty, a consistency-aware framework derived from the stability of self-preference-induced rankings over sampled reasoning solutions. Given a query, we generate multiple candidate solutions and ask the model to judge pairwise preferences among its own outputs. We aggregate self-preferences into ranking distributions via Bradley-Terry modeling with PageRank, and decompose the signal into two entropy-based components: across-trial ranking instability and within-trial candidate ambiguity. Across five LLMs and eight benchmarks, structural signals provide information complementary to answer dispersion: on logical and mathematical reasoning tasks, the combination improves identification of unreliable instances, while on factual retrieval the structural signal collapses toward uniformity, diagnosing a regime boundary where reasoning-level consistency evaluation is uninformative. The two components relate differently to accuracy: within-trial ambiguity correlates positively with correctness -- consistent with settings where multiple plausible solution paths remain competitive -- while across-trial instability correlates negatively, signaling unreliable reasoning. Structural uncertainty is best understood not as a universal confidence estimator, but as a regime-sensitive evaluator of logical reasoning consistency.

  • 6 authors
·
Jun 14

Graph-Based Financial Fraud Detection with Calibrated Risk Scoring and Structural Regularization

Financial transaction fraud prevention faces challenges such as complex relationship structures, concealed behavioral patterns, and dynamically changing data distribution. Discrimination models relying solely on independent sample features are insufficient to fully characterize the risks of group collaboration and chain transfers within transaction networks. This paper proposes a graph neural network representation learning and risk discrimination framework for financial transaction fraud prevention. It integrates transaction records and identity information into node attributes and constructs a transaction graph based on shared attributes and interaction consistency to explicitly model inter-transaction relationships. In model design, a multi-layer message passing mechanism is employed to aggregate neighborhood information, learn node embedding representations containing structural context semantics, and output transaction-level fraud probability and risk scores through a lightweight risk discrimination head. A weighted supervision objective is introduced to mitigate training bias caused by class imbalance, and structural consistency regularization constraints are combined to suppress the impact of noisy edges on representation drift, thereby improving the stability and usability of risk characterization. Experiments are conducted on a publicly available financial transaction dataset, comparing various methods in the same direction and comprehensively evaluating them under a unified evaluation protocol. The results show that the proposed method outperforms other methods in risk ranking and probability calibration quality, validating the effectiveness of graph structure modeling and representation learning collaboration in financial transaction fraud prevention.

  • 6 authors
·
May 11

The Open Molecules 2025 (OMol25) Dataset, Evaluations, and Models

Machine learning (ML) models hold the promise of transforming atomic simulations by delivering quantum chemical accuracy at a fraction of the computational cost. Realization of this potential would enable high-throughout, high-accuracy molecular screening campaigns to explore vast regions of chemical space and facilitate ab initio simulations at sizes and time scales that were previously inaccessible. However, a fundamental challenge to creating ML models that perform well across molecular chemistry is the lack of comprehensive data for training. Despite substantial efforts in data generation, no large-scale molecular dataset exists that combines broad chemical diversity with a high level of accuracy. To address this gap, Meta FAIR introduces Open Molecules 2025 (OMol25), a large-scale dataset composed of more than 100 million density functional theory (DFT) calculations at the omegaB97M-V/def2-TZVPD level of theory, representing billions of CPU core-hours of compute. OMol25 uniquely blends elemental, chemical, and structural diversity including: 83 elements, a wide-range of intra- and intermolecular interactions, explicit solvation, variable charge/spin, conformers, and reactive structures. There are ~83M unique molecular systems in OMol25 covering small molecules, biomolecules, metal complexes, and electrolytes, including structures obtained from existing datasets. OMol25 also greatly expands on the size of systems typically included in DFT datasets, with systems of up to 350 atoms. In addition to the public release of the data, we provide baseline models and a comprehensive set of model evaluations to encourage community engagement in developing the next-generation ML models for molecular chemistry.

  • 23 authors
·
May 13, 2025

WHEN TO ACT, WHEN TO WAIT: Modeling Structural Trajectories for Intent Triggerability in Task-Oriented Dialogue

Task-oriented dialogue systems often face difficulties when user utterances seem semantically complete but lack necessary structural information for appropriate system action. This arises because users frequently do not fully understand their own needs, while systems require precise intent definitions. Current LLM-based agents cannot effectively distinguish between linguistically complete and contextually triggerable expressions, lacking frameworks for collaborative intent formation. We present STORM, a framework modeling asymmetric information dynamics through conversations between UserLLM (full internal access) and AgentLLM (observable behavior only). STORM produces annotated corpora capturing expression trajectories and latent cognitive transitions, enabling systematic analysis of collaborative understanding development. Our contributions include: (1) formalizing asymmetric information processing in dialogue systems; (2) modeling intent formation tracking collaborative understanding evolution; and (3) evaluation metrics measuring internal cognitive improvements alongside task performance. Experiments across four language models reveal that moderate uncertainty (40-60%) can outperform complete transparency in certain scenarios, with model-specific patterns suggesting reconsideration of optimal information completeness in human-AI collaboration. These findings contribute to understanding asymmetric reasoning dynamics and inform uncertainty-calibrated dialogue system design.

  • 8 authors
·
Jun 2, 2025 2

Evaluating Skills, Not Just Agents: Agentic Continuous Evaluation of Skills

Enterprise agent programs are moving from prototypes into production, where reusable skills, tools, and workflow packages must be reviewed with evidence rather than prose. Current gates often scan these artifacts for structure, style, and security, but they do not answer the deployment question: does the capability package help a live agent complete enterprise tasks under the same model, sandbox, and grading policy? We present ACES (Agentic Continuous Evaluation of Skills), a repository-native framework for evaluating skills and product capability packages as executable agent artifacts. ACES runs paired live trials with and without a target skill, normalizes trajectories into the Agent Trajectory Interchange Format (ATIF), grades six default runtime metrics, and reports Skill Lift: the target skill's added value for a fixed task, harness, workspace, and scorer. The same protocol supports product-owned task suites that compare baseline, skill, bundle, team-skill, and plugin targets. On 145 real skills from internal enterprise repositories and public catalogs, scan-only gates surface useful authoring issues but measure complementary facets (structural versus LLM-judge Spearman ρ= 0.14). Across 947 scored paired cases from 58 of 64 production skills and four primary harnesses, mean composite Skill Lift is 0.2134 (95\% paired-case CI [0.1967, 0.2301]); mean outcome-only lift, the average of accuracy and goal accuracy, is 0.1799. Composite lift is positive in 72.8\% of paired cases. The largest process-metric gains appear in skill execution, behavior check, and skill efficiency---signals about discovery, routing, workflow following, and tool use that document scans cannot observe. An open-source implementation of the methodology is available in NVIDIA SkillEvaluator.

  • 12 authors
·
Aug 19