Update model card
#2
by
kiankaydee
- opened
README.md
CHANGED
|
@@ -3,35 +3,30 @@ library_name: transformers
|
|
| 3 |
tags: []
|
| 4 |
---
|
| 5 |
|
| 6 |
-
# Model Card for
|
| 7 |
-
|
| 8 |
-
<!-- Provide a quick summary of what the model is/does. -->
|
| 9 |
|
|
|
|
|
|
|
| 10 |
|
| 11 |
|
| 12 |
## Model Details
|
| 13 |
|
| 14 |
### Model Description
|
| 15 |
|
| 16 |
-
|
| 17 |
-
|
| 18 |
-
|
|
|
|
| 19 |
|
| 20 |
-
- **Developed by:**
|
| 21 |
-
- **
|
| 22 |
-
- **
|
| 23 |
-
- **Model type:** [More Information Needed]
|
| 24 |
-
- **Language(s) (NLP):** [More Information Needed]
|
| 25 |
- **License:** [More Information Needed]
|
| 26 |
-
- **Finetuned from model [optional]:** [More Information Needed]
|
| 27 |
-
|
| 28 |
-
### Model Sources [optional]
|
| 29 |
|
| 30 |
-
|
| 31 |
|
| 32 |
-
- **Repository:** [
|
| 33 |
-
- **Paper
|
| 34 |
-
- **Demo [optional]:** [More Information Needed]
|
| 35 |
|
| 36 |
## Uses
|
| 37 |
|
|
|
|
| 3 |
tags: []
|
| 4 |
---
|
| 5 |
|
| 6 |
+
# Model Card for Phenom CA-MAE-S/16
|
|
|
|
|
|
|
| 7 |
|
| 8 |
+
Channel-agnostic image encoding model designed for microscopy image featurization.
|
| 9 |
+
The model uses a vision transformer backbone with channelwise cross-attention over patch tokens to create contextualized representations separately for each channel.
|
| 10 |
|
| 11 |
|
| 12 |
## Model Details
|
| 13 |
|
| 14 |
### Model Description
|
| 15 |
|
| 16 |
+
This model is a [channel-agnostic masked autoencoder](https://openaccess.thecvf.com/content/CVPR2024/html/Kraus_Masked_Autoencoders_for_Microscopy_are_Scalable_Learners_of_Cellular_Biology_CVPR_2024_paper.html) trained to reconstruct microscopy images over three datasets:
|
| 17 |
+
1. RxRx3
|
| 18 |
+
2. JUMP-CP overexpression
|
| 19 |
+
3. JUMP-CP gene-knockouts
|
| 20 |
|
| 21 |
+
- **Developed, funded, and shared by:** Recursion
|
| 22 |
+
- **Model type:** Vision transformer CA-MAE
|
| 23 |
+
- **Image modality:** Optimized for microscopy images from the CellPainting assay
|
|
|
|
|
|
|
| 24 |
- **License:** [More Information Needed]
|
|
|
|
|
|
|
|
|
|
| 25 |
|
| 26 |
+
### Model Sources
|
| 27 |
|
| 28 |
+
- **Repository:** [https://github.com/recursionpharma/maes_microscopy](https://github.com/recursionpharma/maes_microscopy)
|
| 29 |
+
- **Paper:** [Masked Autoencoders for Microscopy are Scalable Learners of Cellular Biology](https://openaccess.thecvf.com/content/CVPR2024/html/Kraus_Masked_Autoencoders_for_Microscopy_are_Scalable_Learners_of_Cellular_Biology_CVPR_2024_paper.html)
|
|
|
|
| 30 |
|
| 31 |
## Uses
|
| 32 |
|