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shmelev
/
genatator-pipeline

Feature Extraction
Transformers
genatator_pipeline
genomics
gene-annotation
dna-language-models
biology
ab-initio
custom_code
Model card Files Files and versions
xet
Community

Instructions to use shmelev/genatator-pipeline with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

  • Libraries
  • Transformers

    How to use shmelev/genatator-pipeline with Transformers:

    # Use a pipeline as a high-level helper
    from transformers import pipeline
    
    pipe = pipeline("feature-extraction", model="shmelev/genatator-pipeline", trust_remote_code=True)
    # Load model directly
    from transformers import AutoModel
    model = AutoModel.from_pretrained("shmelev/genatator-pipeline", trust_remote_code=True, dtype="auto")
  • Notebooks
  • Google Colab
  • Kaggle
genatator-pipeline
Ctrl+K
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  • 2 contributors
History: 63 commits
gettheworkdone
Merge pull request #23 from gettheworkdone/codex/optimize-gene-finding-memory-usage
1ecf11c unverified 5 days ago
  • docker
    Set Docker pipeline dtype to float32 about 2 months ago
  • tests
    Optimize gene-finding memory with sparse edge peaks and compact masks 5 days ago
  • README.md
    16 kB
    Optimize gene-finding memory with sparse edge peaks and compact masks 5 days ago
  • __init__.py
    13 Bytes
    Add files via upload about 2 months ago
  • config.json
    2.23 kB
    Optimize gene-finding memory with sparse edge peaks and compact masks 5 days ago
  • configuration_genatator_pipeline.py
    14 kB
    Optimize gene-finding memory with sparse edge peaks and compact masks 5 days ago
  • environment.yml
    3.75 kB
    Add files via upload about 2 months ago
  • genatator_core.py
    54.6 kB
    Optimize gene-finding memory with sparse edge peaks and compact masks 5 days ago
  • genatator_pipeline.py
    36.8 kB
    Optimize gene-finding memory with sparse edge peaks and compact masks 5 days ago
  • gff_utils.py
    12.5 kB
    Add transcript confidence metrics, coloring, and GFF attribute updates about 2 months ago
  • modeling_genatator_pipeline.py
    4.6 kB
    Add files via upload about 2 months ago