app / backend /main.py
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Update backend/main.py
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from __future__ import annotations
import os
import tempfile
import traceback
from typing import List
import numpy as np
from fastapi import FastAPI, File, UploadFile, HTTPException
from fastapi.middleware.cors import CORSMiddleware
from fastapi.staticfiles import StaticFiles
import cv2 # type: ignore
import joblib # type: ignore
import tensorflow as tf # type: ignore
from tensorflow.keras.applications.resnet import preprocess_input
# -----------------------------
# Model / scaler loading
# -----------------------------
MODEL_PATH = os.getenv("MODEL_PATH", "/app/model.keras")
SCALER_PATH = os.getenv("SCALER_PATH", "/app/scaler.save")
STATIC_DIR = os.getenv("STATIC_DIR", "/app/static")
_model = None
_scaler = None
def get_model():
global _model
if _model is None:
if not os.path.exists(MODEL_PATH):
raise RuntimeError(
f"Model file not found at {MODEL_PATH}. "
"Place your Keras model at /app/model.keras or set MODEL_PATH."
)
# compile=False is safer for inference-only deployments
_model = tf.keras.models.load_model(MODEL_PATH, compile=False)
return _model
def get_scaler():
global _scaler
if _scaler is None:
if not os.path.exists(SCALER_PATH):
raise RuntimeError(
f"Scaler file not found at {SCALER_PATH}. "
"Place scaler.save at /app/scaler.save or set SCALER_PATH."
)
_scaler = joblib.load(SCALER_PATH)
return _scaler
# -----------------------------
# Preprocessing (as requested)
# -----------------------------
def load_data(image_path: str) -> tf.Tensor:
image = tf.io.read_file(image_path)
image = tf.io.decode_png(image, channels=3)
image = tf.image.resize(image, [224, 224], method="bilinear")
image = tf.cast(image, tf.float32)
image = preprocess_input(image) # ResNet preprocessing
return image
# -----------------------------
# Video -> frames
# -----------------------------
def extract_frames_to_pngs(video_bytes: bytes, max_frames: int = 300) -> List[str]:
"""Decode video bytes with OpenCV and write frames as PNGs to a temp dir.
Returns a list of PNG file paths.
"""
tmpdir = tempfile.mkdtemp(prefix="frames_")
video_path = os.path.join(tmpdir, "input.mp4")
with open(video_path, "wb") as f:
f.write(video_bytes)
cap = cv2.VideoCapture(video_path)
if not cap.isOpened():
raise ValueError("Could not open uploaded video. (Unsupported codec/container?)")
paths: List[str] = []
idx = 0
while idx < max_frames:
ok, frame = cap.read()
if not ok:
break
out_path = os.path.join(tmpdir, f"frame_{idx:05d}.png")
cv2.imwrite(out_path, frame)
paths.append(out_path)
idx += 1
cap.release()
if not paths:
raise ValueError("No frames extracted from video.")
return paths
# -----------------------------
# Post-processing helpers
# -----------------------------
def moving_average(x: np.ndarray, window: int = 7) -> np.ndarray:
if window <= 1:
return x
window = int(max(1, min(window, x.shape[0])))
kernel = np.ones(window, dtype=np.float32) / float(window)
pad = window // 2
xpad = np.pad(x.astype(np.float32), (pad, pad), mode="edge")
return np.convolve(xpad, kernel, mode="valid")
def compute_ef(edv: float, esv: float) -> float:
if edv <= 0:
return float("nan")
return float((edv - esv) / edv * 100.0)
def classify_heart_function(ef: float) -> str:
if not np.isfinite(ef):
return "heart failure"
if ef >= 55.0:
return "normal"
if ef >= 40.0:
return "mildly dysfunction"
return "heart failure"
def _normalize_model_output(raw, n_frames: int) -> np.ndarray:
"""
Normalize model.predict output to shape (N, 1) float array suitable for scaler.inverse_transform.
Handles models that return:
- single array: (N,), (N,1), (N,k), (N,1,1), etc.
- list/tuple of arrays (multi-output)
"""
# Multi-output model: choose the output whose first dim matches number of frames.
if isinstance(raw, (list, tuple)):
shapes = [np.asarray(x).shape for x in raw]
print("PRED LIST SHAPES:", shapes)
chosen = None
for r in raw:
r_arr = np.asarray(r)
if r_arr.ndim >= 1 and r_arr.shape[0] == n_frames:
chosen = r_arr
break
if chosen is None:
chosen = np.asarray(raw[0])
raw_arr = chosen
else:
raw_arr = np.asarray(raw)
print("PRED SHAPE:", raw_arr.shape)
raw_arr = np.asarray(raw_arr)
# Force to (N, 1)
if raw_arr.ndim == 1:
raw_arr = raw_arr.reshape(-1, 1)
elif raw_arr.ndim == 2:
if raw_arr.shape[0] != n_frames:
# Sometimes outputs come as (1, N) — fix that
if raw_arr.shape[1] == n_frames:
raw_arr = raw_arr.T
# If multiple columns, pick the first by default
if raw_arr.shape[1] != 1:
raw_arr = raw_arr[:, :1]
else:
# Flatten everything but the frame dimension
raw_arr = raw_arr.reshape(raw_arr.shape[0], -1)
raw_arr = raw_arr[:, :1]
if raw_arr.shape[0] != n_frames:
raise ValueError(f"Prediction length mismatch: got {raw_arr.shape[0]} but expected {n_frames}")
return raw_arr.astype(np.float32)
# -----------------------------
# FastAPI app
# -----------------------------
app = FastAPI()
app.add_middleware(
CORSMiddleware,
allow_origins=["*"],
allow_credentials=True,
allow_methods=["*"],
allow_headers=["*"],
)
@app.post("/api/analyze")
async def analyze(video: UploadFile = File(...)):
video_bytes = await video.read()
if not video_bytes:
raise HTTPException(status_code=400, detail="Empty video upload.")
try:
frame_paths = extract_frames_to_pngs(
video_bytes,
max_frames=int(os.getenv("MAX_FRAMES", "300")),
)
# Build a batch tensor [N, 224, 224, 3]
batch = tf.stack([load_data(p) for p in frame_paths], axis=0)
model = get_model()
raw_preds = model.predict(batch, verbose=0)
preds_np = _normalize_model_output(raw_preds, n_frames=batch.shape[0])
scaler = get_scaler()
values = scaler.inverse_transform(preds_np).reshape(-1).astype(np.float32)
# Smooth
smooth_window = int(os.getenv("SMOOTH_WINDOW", "7"))
smooth = moving_average(values, window=smooth_window)
edv = float(np.max(smooth))
esv = float(np.min(smooth))
ef = compute_ef(edv, esv)
heart_fn = classify_heart_function(ef)
return {
"ejectionFraction": round(float(ef), 1),
"heartFunction": heart_fn,
"edv": round(edv, 2),
"esv": round(esv, 2),
"numFrames": int(values.shape[0]),
}
except HTTPException:
raise
except Exception as e:
print("ANALYZE ERROR TRACEBACK:\n", traceback.format_exc())
raise HTTPException(status_code=500, detail=f"Inference error: {e}")
# Serve the built frontend (no visual changes; just served as-is)
if os.path.isdir(STATIC_DIR):
app.mount("/", StaticFiles(directory=STATIC_DIR, html=True), name="static")