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InSilicoControl

144 kB

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3 contributors

History: 30 commits

Halper-Stromberg

Add Batch Controls Mode supporting fixed variant coordinates and customizable variant types, VAF, and indel sizes

6a503f7 about 1 month ago

.streamlit
Add interactive IGV.js variant browser and static serving configuration 2 months ago
src
Add Batch Controls Mode supporting fixed variant coordinates and customizable variant types, VAF, and indel sizes about 1 month ago
.gitattributes

1.52 kB
Duplicate from streamlit/streamlit-template-space 3 months ago
.gitignore

301 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download 2 months ago
Dockerfile

487 Bytes
Update Dockerfile to copy .streamlit config and update src/ files with customized app code 2 months ago
README.md

426 Bytes
initial commit 3 months ago
missing_to_bed.py

991 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download 2 months ago
packages.txt

17 Bytes
Create packages.txt 3 months ago
pipeline.py

23.7 kB
Add Batch Controls Mode supporting fixed variant coordinates and customizable variant types, VAF, and indel sizes about 1 month ago
requirements.txt

58 Bytes
Update requirements.txt 3 months ago
streamlit_app.py

46.1 kB
Add Batch Controls Mode supporting fixed variant coordinates and customizable variant types, VAF, and indel sizes about 1 month ago
test_streamlit_bed.py

788 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download 2 months ago