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InSilicoControl

118 kB

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3 contributors

History: 23 commits

Halper-Stromberg

Add window-based variant placement strategy for Direct Probe Coordinates mode

2a68195 3 days ago

.streamlit
Add interactive IGV.js variant browser and static serving configuration 23 days ago
src
Add window-based variant placement strategy for Direct Probe Coordinates mode 3 days ago
.gitattributes

1.52 kB
Duplicate from streamlit/streamlit-template-space about 1 month ago
.gitignore

301 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download 23 days ago
Dockerfile

487 Bytes
Update Dockerfile to copy .streamlit config and update src/ files with customized app code 23 days ago
README.md

426 Bytes
initial commit about 1 month ago
missing_to_bed.py

991 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download 23 days ago
packages.txt

17 Bytes
Create packages.txt about 1 month ago
pipeline.py

22.3 kB
Add window-based variant placement strategy for Direct Probe Coordinates mode 3 days ago
requirements.txt

58 Bytes
Update requirements.txt about 1 month ago
streamlit_app.py

34.2 kB
Add window-based variant placement strategy for Direct Probe Coordinates mode 3 days ago
test_streamlit_bed.py

788 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download 23 days ago