Create Streptococcus/genus.json

Create Enterococcus/genus.json

Create Lactobacillus/genus.json

Create Staphylococcus/genus.json

Create Bacillus/genus.json

Create Campylobacter/genus.json

Create Listeria/genus.json

Rename data/rag/knowledge_base/Enterobacter/Genus.json to data/rag/knowledge_base/Enterobacter/genus.json

Create Klebsiella/genus.json

Rename data/rag/knowledge_base/Enterobacter.json to data/rag/knowledge_base/Enterobacter/Genus.json

Rename data/rag/knowledge_base/ Enterobacter.json to data/rag/knowledge_base/Enterobacter.json

Create knowledge_base/ Enterobacter.json

Delete data/rag/genus/Bacillus.json

Delete data/rag/species/Bacillus_cereus.json

Rename data/rag/index/doc_meta_species to data/rag/index/doc_meta_species.json

Create doc_meta_species

Create doc_meta_genus.json

Create embeddings_species.npy

Create index/embedding_genus.npy

Create species/Bacillus_cereus.json

Create rag/genus/Bacillus.json