Spaces:
Running
Running
boards: add S. aureus (reference strains only)
Browse files- board_meta.json +4 -0
- categories.json +2 -1
- data/saureus_card.json +48 -0
- data/saureus_test.json +0 -0
board_meta.json
CHANGED
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@@ -188,6 +188,10 @@
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"MTB": {
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"ko": "๊ฒฐํต๊ท โ ํ์ค๊ท ์ฃผ H37Rv ์ ์ธํฌ ํ์ ",
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"en": "M. tuberculosis H37Rv โ whole-cell readout"
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}
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}
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}
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"MTB": {
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"ko": "๊ฒฐํต๊ท โ ํ์ค๊ท ์ฃผ H37Rv ์ ์ธํฌ ํ์ ",
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"en": "M. tuberculosis H37Rv โ whole-cell readout"
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},
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"SAureus": {
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"ko": "ํฉ์ํฌ๋์๊ตฌ๊ท โ ํ์ค๊ท ์ฃผ ์ ์ธํฌ ํ์ ",
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"en": "S. aureus (reference strains) โ whole-cell readout"
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}
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}
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}
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categories.json
CHANGED
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@@ -195,7 +195,8 @@
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"boards": [
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"Malaria",
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"SEpidermidis",
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-
"MTB"
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]
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},
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{
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"boards": [
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"Malaria",
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"SEpidermidis",
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"MTB",
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"SAureus"
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]
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},
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{
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data/saureus_card.json
ADDED
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@@ -0,0 +1,48 @@
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{
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"board": "SAureus",
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"target": "โ",
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"type": "pMIC (์ ์ธํฌ ์ต์์ต์ ๋๋)",
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"cut": 2023,
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"threshold": 4.5,
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"n_train": 14338,
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"n_test": 3008,
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"positive_rate": 0.694813829787234,
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"noise_floor": {
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"pairs": 93020,
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"compounds": 459,
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"median": 0.3568909418204198,
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"mean": 0.617805498664006,
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"p75": 0.8955279215704177,
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"p90": 1.5051499783199063,
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"sd_single": 0.5476999101631259
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},
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"baselines": {
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"์์ ์์ธก": {
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"auroc": 0.5,
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"prauc": 0.694813829787234,
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"mae": 0.7932991992747335
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},
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"์ต๊ทผ์ ์ด์": {
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"auroc": 0.6159067454733089,
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"prauc": 0.7493090435197638,
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"mae": 0.8541942710542443
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},
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"Morgan+LightGBM": {
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"auroc": 0.7230824759462531,
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"prauc": 0.8462784950695863,
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"mae": 0.6905488864787732
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}
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},
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"near_threshold": 1030,
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"split_grade": "T",
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"split_grade_note": "์ต์ด ๋ณด๊ณ ์ฐ๋ ๊ธฐ์ค ์๊ฐ ๋ถํ ",
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"answer_grade": "P2",
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"answer_grade_note": "์์๋ฃ๋ ๊ณต๊ฐ์ง๋ง ๋จ์ ํ์ฐ๊ณผ ์ ๋ณ์ด ๋ณธ ํ๋ณธ์ ๋ง๋ ๋ค",
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"assay_keep": "ATCC\\s*(29213|25923|6538)",
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"assay_drop": "resistant|MDR|XDR|multidrug|clinical isolate|clinical strain|MRSA|MSSA|VRSA|VISA|methicillin",
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"source": "ChEMBL_37 ์ฌํ๋ ์ด์
",
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"axis": "X",
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"desc_ko": "ํฉ์ํฌ๋์๊ตฌ๊ท - ์ ์ธํฌ ์ฌ๋ฉธ",
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"desc_en": "S. aureus whole-cell kill",
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"built": "2026-08-24"
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}
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data/saureus_test.json
ADDED
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