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Update app.py
Browse files
app.py
CHANGED
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@@ -121,14 +121,8 @@ def function(model_name: str, input_mode: str, num_molecules: int = None, seed_n
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config.inf_smiles = temp_smiles_file
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config.sample_num = len(smiles_list)
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#
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config.seed = random.randint(0, 10000)
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else:
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try:
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config.seed = int(seed_num)
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except ValueError:
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raise gr.Error("The seed must be an integer value!")
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if model_name != "NoTarget":
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model_name = "DrugGEN"
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@@ -331,28 +325,48 @@ For more details, see our [paper on arXiv](https://arxiv.org/abs/2302.07868).
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gr.Markdown("### Classic Generation", elem_id="generate-mode-label")
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with gr.Column(scale=1, min_width=150):
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input_mode_switch = gr.
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value=False,
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label="
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elem_id="input-mode-switch"
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)
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with gr.Column(scale=1, min_width=150):
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gr.Markdown("### Custom SMILES Input", elem_id="smiles-mode-label")
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# Add custom CSS for
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gr.HTML("""
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<style>
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#input-mode-switch {
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margin:
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display: flex;
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justify-content: center;
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transform: scale(1.5);
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}
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#generate-mode-label, #smiles-mode-label {
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text-align: center;
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margin-top: 10px;
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}
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.input-box {
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border: 2px solid rgba(128, 128, 228, 0.3);
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border-radius: 10px;
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@@ -360,12 +374,63 @@ For more details, see our [paper on arXiv](https://arxiv.org/abs/2302.07868).
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margin-top: 15px;
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background-color: rgba(32, 36, 45, 0.7);
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box-shadow: 0 4px 6px rgba(0, 0, 0, 0.1);
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}
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.input-box:hover {
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border-color: rgba(128, 128, 228, 0.6);
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box-shadow: 0 6px 8px rgba(0, 0, 0, 0.15);
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}
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</style>
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""")
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# Create container for generation mode inputs
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@@ -394,13 +459,6 @@ For more details, see our [paper on arXiv](https://arxiv.org/abs/2302.07868).
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lines=10,
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placeholder="CC(=O)OC1=CC=CC=C1C(=O)O\nCCO\nC1=CC=C(C=C1)C(=O)O\n...",
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)
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-
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# Seed input used in SMILES mode
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seed_num_smiles = gr.Textbox(
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label="Random Seed (Optional)",
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value="",
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info="Set a specific seed for reproducible results, or leave empty for random generation"
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)
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# Handle visibility toggling between the two input modes
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def toggle_visibility(checkbox_value):
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@@ -419,9 +477,9 @@ For more details, see our [paper on arXiv](https://arxiv.org/abs/2302.07868).
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)
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# Helper function to determine which mode is active and which seed to use
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def get_inputs(checkbox_value, num_mols, seed_gen,
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mode = "smiles" if checkbox_value else "generate"
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seed =
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return [mode, num_mols, seed, smiles]
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with gr.Column(scale=2):
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@@ -448,14 +506,14 @@ For more details, see our [paper on arXiv](https://arxiv.org/abs/2302.07868).
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gr.Markdown("### Created by the HUBioDataLab | [GitHub](https://github.com/HUBioDataLab/DrugGEN) | [Paper](https://arxiv.org/abs/2302.07868)")
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submit_button.click(
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fn=lambda model, checkbox, num_mols, seed_gen,
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model,
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"smiles" if checkbox else "generate",
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num_mols,
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-
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smiles
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),
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inputs=[model_name, input_mode_switch, num_molecules, seed_num_generate,
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outputs=[
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image_output,
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file_download,
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config.inf_smiles = temp_smiles_file
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config.sample_num = len(smiles_list)
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# Always use a fixed seed for SMILES mode
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config.seed = 42
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if model_name != "NoTarget":
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model_name = "DrugGEN"
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gr.Markdown("### Classic Generation", elem_id="generate-mode-label")
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with gr.Column(scale=1, min_width=150):
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input_mode_switch = gr.Checkbox(
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value=False,
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label="Switch Input Mode",
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elem_id="input-mode-switch"
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)
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with gr.Column(scale=1, min_width=150):
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gr.Markdown("### Custom SMILES Input", elem_id="smiles-mode-label")
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# Add custom CSS and JavaScript for better styling
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gr.HTML("""
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<style>
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#input-mode-switch {
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margin: 20px auto;
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display: flex;
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justify-content: center;
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}
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#generate-mode-label, #smiles-mode-label {
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text-align: center;
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margin-top: 10px;
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font-weight: bold;
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transition: opacity 0.3s ease;
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}
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/* Make the inactive mode label more subtle */
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#generate-mode-label {
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opacity: 1;
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color: #4CAF50;
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}
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#smiles-mode-label {
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opacity: 0.5;
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color: #2196F3;
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}
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.active-mode {
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text-decoration: underline;
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font-size: 1.1em;
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}
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/* Style for the input boxes */
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.input-box {
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border: 2px solid rgba(128, 128, 228, 0.3);
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border-radius: 10px;
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margin-top: 15px;
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background-color: rgba(32, 36, 45, 0.7);
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box-shadow: 0 4px 6px rgba(0, 0, 0, 0.1);
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transition: all 0.3s ease;
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}
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.input-box:hover {
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border-color: rgba(128, 128, 228, 0.6);
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box-shadow: 0 6px 8px rgba(0, 0, 0, 0.15);
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}
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/* Style the checkbox */
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#input-mode-switch label {
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font-weight: bold;
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font-size: 1.1em;
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color: rgba(128, 128, 228, 0.9);
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}
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/* Add a hint to indicate the toggle functionality */
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#input-mode-switch::after {
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content: 'Click to toggle between modes';
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display: block;
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text-align: center;
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font-size: 0.8em;
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opacity: 0.7;
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margin-top: 5px;
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}
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</style>
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<script>
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// Add JavaScript to enhance the mode switching UI
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document.addEventListener('DOMContentLoaded', function() {
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// Get references to elements
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const checkbox = document.querySelector('#input-mode-switch input[type="checkbox"]');
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const generateLabel = document.querySelector('#generate-mode-label');
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const smilesLabel = document.querySelector('#smiles-mode-label');
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// Add initial active class
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generateLabel.classList.add('active-mode');
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// Add event listener to checkbox
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if (checkbox) {
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checkbox.addEventListener('change', function() {
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if (this.checked) {
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// SMILES mode is active
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generateLabel.style.opacity = '0.5';
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smilesLabel.style.opacity = '1';
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generateLabel.classList.remove('active-mode');
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smilesLabel.classList.add('active-mode');
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} else {
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// Generate mode is active
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generateLabel.style.opacity = '1';
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smilesLabel.style.opacity = '0.5';
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generateLabel.classList.add('active-mode');
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smilesLabel.classList.remove('active-mode');
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}
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});
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}
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});
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</script>
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""")
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# Create container for generation mode inputs
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lines=10,
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placeholder="CC(=O)OC1=CC=CC=C1C(=O)O\nCCO\nC1=CC=C(C=C1)C(=O)O\n...",
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)
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# Handle visibility toggling between the two input modes
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def toggle_visibility(checkbox_value):
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)
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# Helper function to determine which mode is active and which seed to use
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def get_inputs(checkbox_value, num_mols, seed_gen, smiles):
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mode = "smiles" if checkbox_value else "generate"
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seed = "42" if checkbox_value else seed_gen # Use default seed 42 for SMILES mode
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return [mode, num_mols, seed, smiles]
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with gr.Column(scale=2):
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gr.Markdown("### Created by the HUBioDataLab | [GitHub](https://github.com/HUBioDataLab/DrugGEN) | [Paper](https://arxiv.org/abs/2302.07868)")
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submit_button.click(
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fn=lambda model, checkbox, num_mols, seed_gen, smiles: function(
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model,
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"smiles" if checkbox else "generate",
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num_mols,
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"42" if checkbox else seed_gen, # Use default seed 42 for SMILES mode
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smiles
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),
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inputs=[model_name, input_mode_switch, num_molecules, seed_num_generate, smiles_input],
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outputs=[
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image_output,
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file_download,
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