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carbon-a-database-explorer

41.4 MB

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2 contributors

History: 29 commits

lvwerra's picture

lvwerra HF Staff

Keep the match list and the chart in step

66b972c verified 2 days ago

data
Fold the views into one panel, right-size the controls, and open Database from a group (#7) 2 days ago
tests
Fold the views into one panel, right-size the controls, and open Database from a group (#7) 2 days ago
.gitattributes

1.58 kB
Add GenBank assembly taxonomy tab and refreshable SQLite snapshot 9 days ago
.gitignore

39 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 9 days ago
FEATURE_BACKLOG.md

13 kB
Fold the views into one panel, right-size the controls, and open Database from a group (#7) 2 days ago
README.md

20 kB
Drop the breadcrumb, the collapse button, and two shortcuts (#9) 2 days ago
app.css

7.48 kB
Stop preselecting a search match, and make the Database jump look like a jump (#8) 2 days ago
app.py

15.7 kB
Fold the views into one panel, right-size the controls, and open Database from a group (#7) 2 days ago
atlas.css

5.61 kB
Drop the breadcrumb, the collapse button, and two shortcuts (#9) 2 days ago
atlas.js

3.05 kB
Lift captions over the ribbons, light the inflowing flux, move counts to the tooltip (#5) 2 days ago
benchmark_remote.py

2.48 kB
Add SQLite accession index and bounded on-demand bucket retrieval 9 days ago
build_full_index.py

10.8 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
build_index.py

6.02 kB
Add SQLite accession index and bounded on-demand bucket retrieval 9 days ago
build_snapshot.py

3.07 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
catalog.py

6.91 kB
Combine strand decisions into one binary CDS track with background ties 9 days ago
catalog_snapshot.py

1.95 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
compact_index.py

4.59 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
coverage_from_index.py

2.04 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
list_annotation_objects.py

1.36 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
merge_full_index.py

4.77 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
prepare_sample.py

3.89 kB
Deploy initial accession explorer with a bounded GenBank annotation sample 9 days ago
refresh_assemblies.py

4.45 kB
Fold the views into one panel, right-size the controls, and open Database from a group (#7) 2 days ago
refresh_common_names.py

13.6 kB
Turn the Sankey down the page and add lineage shortcuts (#4) 2 days ago
refresh_coverage.py

9.32 kB
Color GenBank taxonomy by published annotation coverage 9 days ago
refresh_icons.py

11.6 kB
Lift captions over the ribbons, light the inflowing flux, move counts to the tooltip (#5) 2 days ago
refresh_taxonomy.py

7.96 kB
Color GenBank taxonomy by published annotation coverage 9 days ago
remote_catalog.py

9.65 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
requirements-data.txt

44 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 9 days ago
requirements.txt

121 Bytes
Add adjustable binary CDS viewer and schema-validation backlog item 9 days ago
style.py

3.93 kB
Carry the genome atlas style through the annotation workspace 9 days ago
taxonomy.py

33.5 kB
Keep the match list and the chart in step 2 days ago