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carbon-a-database-explorer

39.2 MB

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2 contributors

History: 23 commits

lvwerra's picture

lvwerra HF Staff

Turn the Sankey down the page and add lineage shortcuts

9021c34 verified 2 days ago

data
Turn the Sankey down the page and add lineage shortcuts 2 days ago
tests
Turn the Sankey down the page and add lineage shortcuts 2 days ago
.gitattributes

1.58 kB
Add GenBank assembly taxonomy tab and refreshable SQLite snapshot 9 days ago
.gitignore

39 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 10 days ago
FEATURE_BACKLOG.md

12.8 kB
Add clade silhouettes, compact navigation tabs, and drop the hover underline (#3) 2 days ago
README.md

18.9 kB
Turn the Sankey down the page and add lineage shortcuts 2 days ago
app.css

5.85 kB
Add clade silhouettes, compact navigation tabs, and drop the hover underline (#3) 2 days ago
app.py

15 kB
Remove Wet Lab placeholder and use two equal-width navigation tabs 3 days ago
atlas.css

5.44 kB
Turn the Sankey down the page and add lineage shortcuts 2 days ago
atlas.js

2.33 kB
Turn the Sankey down the page and add lineage shortcuts 2 days ago
benchmark_remote.py

2.48 kB
Add SQLite accession index and bounded on-demand bucket retrieval 10 days ago
build_full_index.py

10.8 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
build_index.py

6.02 kB
Add SQLite accession index and bounded on-demand bucket retrieval 10 days ago
build_snapshot.py

3.07 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
catalog.py

6.91 kB
Combine strand decisions into one binary CDS track with background ties 10 days ago
catalog_snapshot.py

1.95 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
compact_index.py

4.59 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
coverage_from_index.py

2.04 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
list_annotation_objects.py

1.36 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
merge_full_index.py

4.77 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
prepare_sample.py

3.89 kB
Deploy initial accession explorer with a bounded GenBank annotation sample 10 days ago
refresh_common_names.py

13.6 kB
Turn the Sankey down the page and add lineage shortcuts 2 days ago
refresh_coverage.py

9.32 kB
Color GenBank taxonomy by published annotation coverage 9 days ago
refresh_icons.py

10.7 kB
Add clade silhouettes, compact navigation tabs, and drop the hover underline (#3) 2 days ago
refresh_taxonomy.py

7.96 kB
Color GenBank taxonomy by published annotation coverage 9 days ago
remote_catalog.py

9.65 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 4 days ago
requirements-data.txt

44 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 10 days ago
requirements.txt

121 Bytes
Add adjustable binary CDS viewer and schema-validation backlog item 10 days ago
style.py

3.93 kB
Carry the genome atlas style through the annotation workspace 9 days ago
taxonomy.py

28.3 kB
Turn the Sankey down the page and add lineage shortcuts 2 days ago