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History: 13 commits

KevinIsInCoding

Claude Sonnet 4.6

feat(trials): replace hardcoded entity regex with LLM extraction

0569d05 about 2 months ago

agents
feat: Stage 4 — entity extraction + knowledge graph + KG-expanded RAG about 2 months ago
data
feat(trials): replace hardcoded entity regex with LLM extraction about 2 months ago
extraction
perf(extraction): switch to Haiku + add per-paper retry for missed PMIDs about 2 months ago
graph
feat: Stage 4 — entity extraction + knowledge graph + KG-expanded RAG about 2 months ago
ingestion
feat(trials): replace hardcoded entity regex with LLM extraction about 2 months ago
project_proposal
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
rag
feat(rag): switch embedding model to BioLORD-2023-C about 2 months ago
scripts
feat(trials): replace hardcoded entity regex with LLM extraction about 2 months ago
tests
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
.env.example

419 Bytes
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
.gitignore

291 Bytes
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
CLAUDE.md
5.32 kB
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
LICENSE

1.06 kB
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
PRFAQ.md

13 kB
docs: add launch date to PRFAQ press release dateline about 2 months ago
README.md

3.45 kB
feat: Stage 5 — Gradio UI + HuggingFace Spaces deployment about 2 months ago
app.py
6.2 kB
feat: Stage 5 — Gradio UI + HuggingFace Spaces deployment about 2 months ago
config.py

2.66 kB
perf(extraction): switch to Haiku + add per-paper retry for missed PMIDs about 2 months ago
llm.py

2.7 kB
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
logging_config.py

1.67 kB
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
main.py

2.68 kB
feat: Stage 4 — entity extraction + knowledge graph + KG-expanded RAG about 2 months ago
models.py

3.78 kB
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
prompts.py

2.74 kB
feat: initial project scaffold and Stage 2 ingestion pipeline about 2 months ago
pyproject.toml

754 Bytes
feat: Stage 3 — RAG pipeline + working end-to-end query about 2 months ago
requirements.txt

178 Bytes
feat: Stage 5 — Gradio UI + HuggingFace Spaces deployment about 2 months ago
tools.py

1.88 kB
feat(trials): replace hardcoded entity regex with LLM extraction about 2 months ago
uv.lock

884 kB
feat: Stage 3 — RAG pipeline + working end-to-end query about 2 months ago