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title: Virtual Gene Scope v2.0
emoji: 🧬
colorFrom: purple
colorTo: blue
sdk: docker
app_port: 8501
pinned: false
license: apache-2.0
tags:
- streamlit
- nursing
- genomics
- alphagenome
- pharmacogenomics
- uk-nursing
- nmc
---
# 🧬 Virtual Gene Scope v2.0
**Explore the Regulatory Genome with Google DeepMind's AlphaGenome.**
An educational tool for nursing students and healthcare professionals to visualise how non-coding genetic variants affect gene regulation — covering expression, splicing, chromatin accessibility, and contact maps.
> *Built by nurses who code. For nurses who care about genomics.*
> *Part of the [CQAI Nursing Education Toolkit](https://github.com/Clinical-Quality-Artifical-Intelligence)*
---
## ⚕️ Clinical Disclaimer
This tool is for **educational purposes only**. It does not make clinical decisions and must not be used for patient care without independent verification by qualified healthcare professionals.
---
## ✨ Features
- 🏥 **Disease Risk Mode** — Explore pathogenic variants in 8 disease-associated genes
- 💊 **Drug Response Mode (PGx)** — See how variants affect drug metabolism (8 PGx genes)
- 🧪 **Custom Variant Mode** — Input any variant and see predicted effects
- 🫀 **Tissue Context** — Select from 10 tissue types with UBERON ontology terms
- 📊 **Multi-modal Demo Tracks** — RNA expression, splicing, chromatin accessibility
- 👩⚕️ **Nursing Reference Cards** — NMC-aligned clinical guidance per gene
- 📎 **DOCX Report Export** — Download a formatted gene analysis report
- 🔗 **ClinVar / PharmGKB / OMIM links** — Direct links to authoritative databases
- 🎓 **NMC Proficiency Map** — Standards of Proficiency alignment per gene
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