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#1
by
RichardLu
- opened
- hf_requirements.txt +17 -0
- streamlit_app.py +278 -0
hf_requirements.txt
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# Hugging Face Spaces Requirements
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# Minimal dependencies for deployment
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# PyTorch (CPU version for HF Spaces)
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--extra-index-url https://download.pytorch.org/whl/cpu
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torch==2.1.0
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torchvision==0.16.0
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# Core
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pillow>=10.0.0
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numpy>=1.24.0
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# Model Interpretability
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grad-cam>=1.4.0
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# Web UI
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streamlit>=1.28.0
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streamlit_app.py
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"""
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Streamlit Web UI for Pneumonia Detection.
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Run with: streamlit run app/streamlit_app.py
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"""
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import sys
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from pathlib import Path
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# Add project root to path
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sys.path.insert(0, str(Path(__file__).parent.parent))
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import streamlit as st
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import torch
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from PIL import Image
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import time
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from src.config import CHECKPOINT_PATH, CLASS_NAMES
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from src.model import create_model, get_device
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from src.predict import load_model, predict_image
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from src.gradcam import generate_gradcam
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# =============================================================================
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# Page Configuration
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# =============================================================================
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st.set_page_config(
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page_title="Pneumonia Detection",
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page_icon="π«",
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layout="wide",
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initial_sidebar_state="expanded"
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)
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# =============================================================================
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# Custom CSS
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# =============================================================================
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st.markdown("""
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<style>
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.main-header {
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font-size: 2.5rem;
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font-weight: bold;
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color: #1E88E5;
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text-align: center;
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margin-bottom: 0.5rem;
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}
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.sub-header {
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font-size: 1.1rem;
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color: #666;
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text-align: center;
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margin-bottom: 2rem;
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}
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.prediction-box {
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padding: 1.5rem;
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border-radius: 10px;
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text-align: center;
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margin: 1rem 0;
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}
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.prediction-normal {
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background-color: #E8F5E9;
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border: 2px solid #4CAF50;
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}
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.prediction-pneumonia {
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background-color: #FFEBEE;
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border: 2px solid #F44336;
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}
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.confidence-text {
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font-size: 1.2rem;
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font-weight: bold;
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}
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.metric-card {
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background-color: #f8f9fa;
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padding: 1rem;
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border-radius: 8px;
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text-align: center;
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}
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</style>
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""", unsafe_allow_html=True)
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# =============================================================================
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# Model Loading (Cached)
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# =============================================================================
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@st.cache_resource
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def load_model_cached():
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"""Load model once and cache it."""
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device = get_device()
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model = create_model(pretrained=False, freeze_backbone=False, device=device)
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model = load_model(model, CHECKPOINT_PATH, device)
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return model, device
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# =============================================================================
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# Sidebar
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# =============================================================================
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with st.sidebar:
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st.image("https://img.icons8.com/fluency/96/lungs.png", width=80)
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st.title("About")
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st.markdown("""
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This application uses deep learning to detect **pneumonia** from chest X-ray images.
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**Model:** EfficientNet-B0
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**Accuracy:** 90.5%
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**Recall:** 98.2%
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""")
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st.divider()
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st.subheader("How to Use")
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st.markdown("""
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1. Upload a chest X-ray image
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2. Click **Analyze Image**
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3. View prediction and Grad-CAM
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""")
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st.divider()
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st.subheader("Model Metrics")
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col1, col2 = st.columns(2)
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with col1:
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st.metric("Accuracy", "90.5%")
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st.metric("Precision", "88.0%")
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with col2:
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st.metric("Recall", "98.2%")
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st.metric("F1 Score", "92.8%")
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st.divider()
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st.markdown("""
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**Links:**
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[GitHub Repository](#) | [Live Demo](#)
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---
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*Built with PyTorch & Streamlit*
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""")
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# =============================================================================
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# Main Content
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# =============================================================================
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# Header
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st.markdown('<p class="main-header">π« Pneumonia Detection from Chest X-Rays</p>', unsafe_allow_html=True)
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st.markdown('<p class="sub-header">Upload a chest X-ray image to detect pneumonia using AI</p>', unsafe_allow_html=True)
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# Load model
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try:
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model, device = load_model_cached()
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model_loaded = True
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except Exception as e:
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st.error(f"Failed to load model: {e}")
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model_loaded = False
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if model_loaded:
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# Create columns for layout
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col1, col2 = st.columns([1, 1])
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with col1:
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st.subheader("π€ Upload Image")
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uploaded_file = st.file_uploader(
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"Choose a chest X-ray image",
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type=["jpg", "jpeg", "png"],
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help="Supported formats: JPG, JPEG, PNG"
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)
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# Sample images section
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st.markdown("---")
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st.markdown("**Or try a sample image:**")
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sample_col1, sample_col2 = st.columns(2)
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use_sample = None
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with sample_col1:
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if st.button("π’ Normal Sample", width="stretch"):
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use_sample = "normal"
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with sample_col2:
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if st.button("π΄ Pneumonia Sample", width="stretch"):
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use_sample = "pneumonia"
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# Load sample image if selected
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if use_sample == "normal":
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sample_path = Path("data/raw/test/NORMAL/IM-0001-0001.jpeg")
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if sample_path.exists():
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uploaded_file = sample_path
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elif use_sample == "pneumonia":
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sample_path = Path("data/raw/test/PNEUMONIA/person1_virus_6.jpeg")
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if sample_path.exists():
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uploaded_file = sample_path
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with col2:
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st.subheader("π Analysis Results")
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results_placeholder = st.empty()
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# Process image if uploaded
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if uploaded_file is not None:
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# Load image
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if isinstance(uploaded_file, Path):
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image = Image.open(uploaded_file).convert("RGB")
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st.session_state['image_source'] = str(uploaded_file)
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else:
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image = Image.open(uploaded_file).convert("RGB")
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st.session_state['image_source'] = uploaded_file.name
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# Display uploaded image
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with col1:
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st.image(image, caption="Uploaded X-Ray", width="stretch")
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# Analyze button
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with col1:
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analyze_button = st.button("π¬ Analyze Image", type="primary", width="stretch")
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if analyze_button:
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with col2:
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with st.spinner("Analyzing image..."):
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# Run prediction
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| 218 |
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start_time = time.time()
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pred_class, confidence = predict_image(model, image, device)
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inference_time = (time.time() - start_time) * 1000
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# Generate Grad-CAM
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cam_image, _, _, original = generate_gradcam(model, image, device)
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# Display results
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if pred_class == "PNEUMONIA":
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st.markdown(f"""
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<div class="prediction-box prediction-pneumonia">
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<h2 style="color: #F44336; margin: 0;">β οΈ PNEUMONIA DETECTED</h2>
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<p class="confidence-text">Confidence: {confidence:.1%}</p>
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</div>
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""", unsafe_allow_html=True)
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else:
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st.markdown(f"""
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<div class="prediction-box prediction-normal">
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<h2 style="color: #4CAF50; margin: 0;">β
NORMAL</h2>
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<p class="confidence-text">Confidence: {confidence:.1%}</p>
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</div>
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""", unsafe_allow_html=True)
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# Metrics row
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m1, m2, m3 = st.columns(3)
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with m1:
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st.metric("Prediction", pred_class)
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with m2:
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st.metric("Confidence", f"{confidence:.1%}")
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with m3:
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st.metric("Time", f"{inference_time:.0f}ms")
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# Grad-CAM visualization
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st.markdown("---")
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st.subheader("π₯ Grad-CAM Visualization")
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st.caption("Highlighted regions show areas that influenced the prediction")
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gcol1, gcol2 = st.columns(2)
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with gcol1:
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st.image(original, caption="Original", width="stretch")
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with gcol2:
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| 259 |
+
st.image(cam_image, caption="Grad-CAM Heatmap", width="stretch")
|
| 260 |
+
|
| 261 |
+
# Disclaimer
|
| 262 |
+
st.warning("""
|
| 263 |
+
**Disclaimer:** This tool is for educational purposes only and should not be used
|
| 264 |
+
for medical diagnosis. Always consult a qualified healthcare professional.
|
| 265 |
+
""")
|
| 266 |
+
|
| 267 |
+
else:
|
| 268 |
+
st.error("Model could not be loaded. Please check the model file exists.")
|
| 269 |
+
|
| 270 |
+
# =============================================================================
|
| 271 |
+
# Footer
|
| 272 |
+
# =============================================================================
|
| 273 |
+
|
| 274 |
+
st.markdown("---")
|
| 275 |
+
st.markdown(
|
| 276 |
+
"<p style='text-align: center; color: #888;'>Built with β€οΈ using PyTorch, EfficientNet-B0, and Streamlit</p>",
|
| 277 |
+
unsafe_allow_html=True
|
| 278 |
+
)
|