Update README with full feature list, live inference docs, deployment guide

README.md

@@ -1,13 +1,19 @@
 # CortexLab Dashboard
 
-Interactive analysis dashboard for [CortexLab](https://github.com/siddhant-rajhans/cortexlab) - multimodal fMRI brain encoding toolkit.
+Futuristic interactive analysis dashboard for [CortexLab](https://github.com/siddhant-rajhans/cortexlab) - multimodal fMRI brain encoding toolkit built on Meta's TRIBE v2.
+
+Glassmorphism dark theme with 3D brain visualization, real-time inference, and research-grade analysis tools.
 
 ## Pages
 
-- **Brain Alignment Benchmark** - Compare AI model representations against brain responses (RSA, CKA, Procrustes)
-- **Cognitive Load Scorer** - Visualize cognitive demand across visual, auditory, language, and executive dimensions
-- **Temporal Dynamics** - Peak latency, lag correlations, sustained vs transient response decomposition
-- **ROI Connectivity** - Correlation matrices, network clustering, degree centrality, graph visualization
+| Page | Description |
+|---|---|
+| **Brain Alignment Benchmark** | Score AI models against brain responses with RSA, CKA, Procrustes + permutation tests, bootstrap CIs, FDR correction, noise ceiling, RDM visualization |
+| **Cognitive Load Scorer** | Predict cognitive demand across 4 dimensions with confidence bands, comparison mode, per-ROI breakdown |
+| **Temporal Dynamics** | Raw timecourses, peak latency hierarchy, lag correlation with null bands, cross-ROI lag matrix, sustained/transient decomposition |
+| **ROI Connectivity** | Partial correlation, dendrogram, modularity, degree/betweenness centrality, edge weight distribution, network graph |
+| **3D Brain Viewer** | Interactive rotatable fsaverage brain with activation overlays, publication-quality 4-panel views, ROI highlighting, sulcal depth blending |
+| **Live Inference** | Real-time brain prediction from webcam, screen capture, or video file with live-updating 3D brain, cognitive load timeline, and metrics |
 
 ## Quick Start
 
@@ -16,12 +22,59 @@ pip install -r requirements.txt
 streamlit run Home.py
 ```
 
-Runs on **synthetic data** by default - no GPU or real fMRI data required.
+Runs on **biologically realistic synthetic data** by default (HRF convolution, modality-specific ROI activation, spatial smoothing). No GPU or real fMRI data required.
+
+## Live Inference (Local Only)
+
+For real-time brain prediction from webcam, screen, or video:
+
+```bash
+# Install optional capture dependencies
+pip install opencv-python mss Pillow
+
+# For real TRIBE v2 inference (needs GPU):
+pip install -e ../cortexlab[analysis]
+
+# Start dashboard
+streamlit run Home.py
+# Navigate to Live Inference page
+```
+
+Without CortexLab installed, live inference runs in **simulation mode** - predictions are generated from image statistics (brightness, contrast, color) mapped to brain ROIs.
+
+## Features
+
+- **Futuristic UI**: Glassmorphism dark theme, neon accents, gradient headings, glowing metric cards, animated borders
+- **3D Brain Hero**: Rotatable fsaverage brain mesh on the home page
+- **Biologically Realistic Data**: HRF-convolved synthetic data with modality-specific activation patterns
+- **Statistical Rigor**: Permutation tests, bootstrap CIs, FDR correction, noise ceiling estimation
+- **Cross-Page State**: ROI selections carry between pages, shared session predictions
+- **File Upload**: Upload .npy predictions from real CortexLab runs
+- **CSV/JSON Export**: Download results from every analysis page
+- **Methodology Docs**: Every page has an expandable methodology section with references
+
+## Deployment
+
+### HuggingFace Spaces
+
+Live at: [huggingface.co/spaces/SID2000/cortexlab-dashboard](https://huggingface.co/spaces/SID2000/cortexlab-dashboard)
+
+Docker-based deployment. Live inference page shows simulation mode (no webcam/GPU access in Spaces).
+
+### Local
+
+```bash
+git clone https://github.com/siddhant-rajhans/cortexlab-dashboard.git
+cd cortexlab-dashboard
+pip install -r requirements.txt
+streamlit run Home.py
+```
 
 ## Links
 
 - [CortexLab Library](https://github.com/siddhant-rajhans/cortexlab)
 - [CortexLab on HuggingFace](https://huggingface.co/SID2000/cortexlab)
+- [Live Demo](https://huggingface.co/spaces/SID2000/cortexlab-dashboard)
 
 ## License