update app.py
#2
by
tiffany101 - opened
app.py
CHANGED
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@@ -8,191 +8,369 @@ import numpy as np
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import cv2
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import os
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#
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# Model configuration
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# ======================
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MODEL_PATH = "robust_galaxy_model.pth"
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CLASS_NAMES = ["Elliptical", "Spiral"]
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DEVICE = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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#
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# Preprocessing
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# ======================
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preprocess = transforms.Compose([
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transforms.Resize((224, 224)),
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transforms.ToTensor(),
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transforms.Normalize(
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mean=[0.485, 0.456, 0.406],
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std=[0.229, 0.224, 0.225]
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)
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])
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#
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# Model loading
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# ======================
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def get_model(num_classes=2):
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model = models.resnet18(weights=None)
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model.fc = nn.Linear(model.fc.in_features, num_classes)
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return model
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def load_model():
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model = get_model()
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if os.path.exists(MODEL_PATH):
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else:
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print("
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model.to(DEVICE)
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model.eval()
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return model
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model
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#
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# Grad-CAM
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# ======================
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class GradCAM:
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def __init__(self, model, target_layer):
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self.model = model
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self.target_layer = target_layer
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self.gradients = None
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self.activations = None
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def save_activation(self, module, input, output):
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self.activations = output.detach()
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def save_gradient(self, module, grad_input, grad_output):
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self.gradients = grad_output[0].detach()
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def
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if image is None:
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return None, "
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if
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custom_css = """
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}
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"""
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with gr.Blocks(css=custom_css) as demo:
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with gr.Row():
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classify_btn.click(
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fn=
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inputs=
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outputs=[
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)
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#
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if __name__ == "__main__":
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import cv2
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import os
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# Workaround for Gradio API schema bug
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# Monkey-patch to handle the schema generation error gracefully
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try:
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import gradio_client.utils as client_utils
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original_get_type = client_utils.get_type
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def patched_get_type(schema):
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if isinstance(schema, bool):
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return "bool"
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return original_get_type(schema)
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client_utils.get_type = patched_get_type
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except:
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pass # If patching fails, continue anyway
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# Model configuration
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MODEL_PATH = "robust_galaxy_model.pth"
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NUM_CLASSES = 2
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CLASS_NAMES = ["Elliptical", "Spiral"]
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DEVICE = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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# Image preprocessing
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preprocess = transforms.Compose([
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transforms.Resize((224, 224)),
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transforms.ToTensor(),
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transforms.Normalize(mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225])
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])
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# Load model
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def get_model(num_classes=2):
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model = models.resnet18(weights=None)
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model.fc = nn.Linear(model.fc.in_features, num_classes)
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return model
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def load_model():
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model = get_model(NUM_CLASSES)
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if os.path.exists(MODEL_PATH):
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try:
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state_dict = torch.load(MODEL_PATH, map_location=DEVICE)
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model.load_state_dict(state_dict)
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print(f"Model loaded successfully from {MODEL_PATH}")
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except Exception as e:
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print(f"Error loading model: {e}")
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print("Using untrained model")
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else:
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print(f"Model file not found at {MODEL_PATH}. Using untrained model.")
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model.to(DEVICE)
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model.eval()
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return model
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# Load model - handle errors gracefully
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model = None
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try:
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model = load_model()
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print("Model loaded successfully")
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except Exception as e:
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print(f"Failed to load model: {e}")
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import traceback
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traceback.print_exc()
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# Create a dummy model as fallback
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model = get_model(NUM_CLASSES).to(DEVICE)
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model.eval()
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print("Using untrained model as fallback")
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# Grad-CAM implementation
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class GradCAM:
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def __init__(self, model, target_layer):
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self.model = model
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self.target_layer = target_layer
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self.gradients = None
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self.activations = None
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self.hook_handles = []
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def save_activation(self, module, input, output):
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self.activations = output.detach()
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def save_gradient(self, module, grad_input, grad_output):
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self.gradients = grad_output[0].detach()
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def generate_cam(self, input_image, target_class=None):
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# Register hooks
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forward_handle = self.target_layer.register_forward_hook(self.save_activation)
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backward_handle = self.target_layer.register_full_backward_hook(self.save_gradient)
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try:
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# Forward pass
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model_output = self.model(input_image)
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if target_class is None:
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target_class = model_output.argmax(dim=1).item()
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# Backward pass
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self.model.zero_grad()
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class_score = model_output[0, target_class]
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class_score.backward(retain_graph=False)
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if self.gradients is None or self.activations is None:
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return np.zeros((7, 7)) # Default size for ResNet layer4
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gradients = self.gradients[0]
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activations = self.activations[0]
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# Global average pooling of gradients
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weights = gradients.mean(dim=(1, 2), keepdim=True)
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cam = (weights * activations).sum(dim=0)
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# Apply ReLU and normalize
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cam = F.relu(cam)
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cam = cam - cam.min()
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if cam.max() > 0:
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cam = cam / cam.max()
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return cam.detach().cpu().numpy()
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finally:
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# Remove hooks
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forward_handle.remove()
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backward_handle.remove()
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self.gradients = None
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self.activations = None
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def overlay_heatmap(image, heatmap, alpha=0.4):
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"""Overlay heatmap on original image"""
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heatmap_resized = cv2.resize(heatmap, (image.shape[1], image.shape[0]))
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heatmap_colored = cv2.applyColorMap(np.uint8(255 * heatmap_resized), cv2.COLORMAP_JET)
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output = cv2.addWeighted(image, 1 - alpha, heatmap_colored, alpha, 0)
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return output
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def predict_galaxy(image):
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"""Predict galaxy morphology and generate Grad-CAM"""
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if image is None:
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return None, "Please upload an image."
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if model is None:
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return None, "Error: Model not loaded. Please check the logs."
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try:
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# Ensure model is in eval mode
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model.eval()
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# Convert image to PIL if it's not already
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if isinstance(image, np.ndarray):
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image = Image.fromarray(image.astype('uint8'))
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elif not isinstance(image, Image.Image):
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image = Image.open(image) if hasattr(image, 'read') else Image.fromarray(np.array(image))
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# Ensure image is RGB
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if image.mode != 'RGB':
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image = image.convert('RGB')
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# Preprocess image
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img_tensor = preprocess(image).unsqueeze(0).to(DEVICE)
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img_tensor.requires_grad = True
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# Get prediction
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with torch.set_grad_enabled(True):
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outputs = model(img_tensor)
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probs = F.softmax(outputs, dim=1)
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pred_class = outputs.argmax(dim=1).item()
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confidence = probs[0][pred_class].item()
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# Generate Grad-CAM
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try:
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gradcam = GradCAM(model, model.layer4)
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cam = gradcam.generate_cam(img_tensor, pred_class)
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except Exception as cam_error:
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print(f"Grad-CAM error: {cam_error}")
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import traceback
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traceback.print_exc()
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# If Grad-CAM fails, just return the original image
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cam = None
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# Prepare original image for overlay
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img_np = np.array(image)
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img_resized = cv2.resize(img_np, (224, 224))
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# Create overlay if Grad-CAM succeeded
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if cam is not None:
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try:
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overlay = overlay_heatmap(img_resized, cam)
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overlay_rgb = cv2.cvtColor(overlay, cv2.COLOR_BGR2RGB)
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overlay_pil = Image.fromarray(overlay_rgb)
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except Exception as overlay_error:
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print(f"Overlay error: {overlay_error}")
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overlay_pil = image.resize((224, 224))
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else:
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overlay_pil = image.resize((224, 224))
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| 198 |
+
# Format results
|
| 199 |
+
result_text = f"Predicted Class: {CLASS_NAMES[pred_class]}\nConfidence: {confidence:.2%}"
|
| 200 |
+
|
| 201 |
+
# Ensure we return PIL Image
|
| 202 |
+
if not isinstance(overlay_pil, Image.Image):
|
| 203 |
+
overlay_pil = Image.fromarray(np.array(overlay_pil))
|
| 204 |
+
|
| 205 |
+
return overlay_pil, str(result_text)
|
| 206 |
+
except Exception as e:
|
| 207 |
+
import traceback
|
| 208 |
+
error_msg = f"Error: {str(e)}\n{traceback.format_exc()}"
|
| 209 |
+
print(error_msg) # Print for debugging
|
| 210 |
+
return None, f"Error: {str(e)}"
|
| 211 |
+
|
| 212 |
+
# Custom CSS for black background and white text
|
| 213 |
custom_css = """
|
| 214 |
+
.gradio-container {
|
| 215 |
+
background-color: #000000 !important;
|
| 216 |
+
color: #ffffff !important;
|
| 217 |
+
}
|
| 218 |
+
body {
|
| 219 |
+
background-color: #000000 !important;
|
| 220 |
+
color: #ffffff !important;
|
| 221 |
+
}
|
| 222 |
+
.gradio-container * {
|
| 223 |
+
color: #ffffff !important;
|
| 224 |
+
}
|
| 225 |
+
h1, h2, h3, h4, p, label, span, div {
|
| 226 |
+
color: #ffffff !important;
|
| 227 |
+
}
|
| 228 |
+
.gr-markdown, .gr-markdown * {
|
| 229 |
+
color: #ffffff !important;
|
| 230 |
+
}
|
| 231 |
+
.gr-button {
|
| 232 |
+
background-color: #333333 !important;
|
| 233 |
+
color: #ffffff !important;
|
| 234 |
+
border: 1px solid #555555 !important;
|
| 235 |
+
}
|
| 236 |
+
.gr-button:hover {
|
| 237 |
+
background-color: #555555 !important;
|
| 238 |
+
}
|
| 239 |
+
.gr-textbox, .gr-textbox input, .gr-textbox textarea {
|
| 240 |
+
background-color: #1a1a1a !important;
|
| 241 |
+
color: #ffffff !important;
|
| 242 |
+
border: 1px solid #555555 !important;
|
| 243 |
+
}
|
| 244 |
+
.gr-image {
|
| 245 |
+
background-color: #000000 !important;
|
| 246 |
+
border: none !important;
|
| 247 |
+
padding: 0 !important;
|
| 248 |
+
margin: 0 !important;
|
| 249 |
+
}
|
| 250 |
+
.gr-image img {
|
| 251 |
+
border: none !important;
|
| 252 |
+
box-shadow: none !important;
|
| 253 |
+
background-color: #000000 !important;
|
| 254 |
+
}
|
| 255 |
+
.gr-image-container, .image-container, .image-wrapper {
|
| 256 |
+
border: none !important;
|
| 257 |
+
background-color: #000000 !important;
|
| 258 |
+
padding: 0 !important;
|
| 259 |
+
margin: 0 !important;
|
| 260 |
+
}
|
| 261 |
+
.gr-image .toolbar, .gr-image .image-controls {
|
| 262 |
+
display: none !important;
|
| 263 |
+
}
|
| 264 |
+
.gr-image label, .gr-image .label-wrap {
|
| 265 |
+
display: none !important;
|
| 266 |
+
}
|
| 267 |
+
.gr-box {
|
| 268 |
+
border: none !important;
|
| 269 |
+
background-color: #000000 !important;
|
| 270 |
+
}
|
| 271 |
+
.panel, .panel-header {
|
| 272 |
+
background-color: #000000 !important;
|
| 273 |
+
border: none !important;
|
| 274 |
+
}
|
| 275 |
"""
|
| 276 |
|
| 277 |
+
# Create Gradio interface
|
| 278 |
+
# Note: There's a known Gradio bug with API schema generation that causes errors
|
| 279 |
+
# The app will still work for classification, but API endpoints may fail
|
| 280 |
with gr.Blocks(css=custom_css) as demo:
|
| 281 |
+
# Landing Section
|
| 282 |
+
with gr.Column():
|
| 283 |
+
landing_img = gr.Image(value="landing.jpg", height=500, show_label=False, container=False)
|
| 284 |
+
landing_text = gr.Markdown("""
|
| 285 |
+
<div style="text-align: center; padding: 30px; color: white; background-color: #000000; width: 100%; display: flex; flex-direction: column; align-items: center; justify-content: center;">
|
| 286 |
+
<h1 style="font-size: 96px; font-weight: bold; margin: 0 auto 30px auto; text-align: center; width: 100%;">Galaxy Morphology AI</h1>
|
| 287 |
+
<p style="font-size: 56px; font-weight: normal; margin: 0 auto; text-align: center; width: 100%;">Classify galaxies with state-of-the-art deep learning</p>
|
| 288 |
+
</div>
|
| 289 |
+
""")
|
| 290 |
+
|
| 291 |
+
# Spacing between sections
|
| 292 |
+
gr.Markdown("<div style='height: 60px;'></div>")
|
| 293 |
+
|
| 294 |
+
# How Astrophysicists Use This Section
|
| 295 |
with gr.Row():
|
| 296 |
+
with gr.Column(scale=1):
|
| 297 |
+
gr.Markdown("""
|
| 298 |
+
# How Astrophysicists Use This
|
| 299 |
+
|
| 300 |
+
Galaxy morphology classification is a fundamental tool in modern astrophysics.
|
| 301 |
+
By automatically identifying whether a galaxy is elliptical or spiral, researchers
|
| 302 |
+
can analyze large datasets from telescopes like the Hubble Space Telescope and
|
| 303 |
+
the James Webb Space Telescope. This classification helps understand galaxy
|
| 304 |
+
formation, evolution, and the distribution of matter in the universe.
|
| 305 |
+
|
| 306 |
+
The deep learning model uses convolutional neural networks to identify key
|
| 307 |
+
features in galaxy images, such as spiral arms, central bulges, and overall
|
| 308 |
+
structure. This automated classification enables astronomers to process millions
|
| 309 |
+
of galaxy images efficiently, accelerating discoveries in cosmology and
|
| 310 |
+
extragalactic astronomy.
|
| 311 |
+
""")
|
| 312 |
+
with gr.Column(scale=1):
|
| 313 |
+
astro_img = gr.Image(value="astro.jpg", show_label=False, container=False, height=400)
|
| 314 |
+
gr.Markdown("<p style='text-align: center; color: white; margin-top: 10px;'>Astrophysics Research</p>")
|
| 315 |
+
|
| 316 |
+
# Spacing between sections
|
| 317 |
+
gr.Markdown("<div style='height: 60px;'></div>")
|
| 318 |
+
|
| 319 |
+
# Classification Section
|
| 320 |
+
gr.Markdown("# Galaxy Morphology Classification")
|
| 321 |
+
gr.Markdown("Upload a galaxy image to classify its morphology and visualize the model's attention using Grad-CAM.")
|
| 322 |
+
|
| 323 |
+
with gr.Row():
|
| 324 |
+
with gr.Column():
|
| 325 |
+
input_image = gr.Image(label="Upload Galaxy Image")
|
| 326 |
+
classify_btn = gr.Button("Classify Galaxy")
|
| 327 |
+
|
| 328 |
+
with gr.Column():
|
| 329 |
+
output_image = gr.Image(label="Grad-CAM Visualization")
|
| 330 |
+
result_text = gr.Textbox(label="Classification Result")
|
| 331 |
+
|
| 332 |
+
# Register the classification function
|
| 333 |
+
# Disable API to avoid Gradio schema generation bug
|
| 334 |
classify_btn.click(
|
| 335 |
+
fn=predict_galaxy,
|
| 336 |
+
inputs=[input_image],
|
| 337 |
+
outputs=[output_image, result_text],
|
| 338 |
+
api_name=False
|
| 339 |
)
|
| 340 |
+
|
| 341 |
+
# Spacing between sections
|
| 342 |
+
gr.Markdown("<div style='height: 60px;'></div>")
|
| 343 |
+
|
| 344 |
+
# Dark Energy Section
|
| 345 |
+
gr.Markdown("""
|
| 346 |
+
# Understanding Dark Energy Through Galaxy Morphology
|
| 347 |
+
|
| 348 |
+
Galaxy morphology classification plays a crucial role in understanding dark energy,
|
| 349 |
+
one of the most profound mysteries in modern cosmology. Dark energy is the
|
| 350 |
+
mysterious force driving the accelerated expansion of the universe, and its nature
|
| 351 |
+
remains one of the biggest questions in physics.
|
| 352 |
+
|
| 353 |
+
By classifying large numbers of galaxies and mapping their distribution across
|
| 354 |
+
cosmic time, astronomers can trace the expansion history of the universe.
|
| 355 |
+
Different galaxy types (elliptical vs spiral) form and evolve differently, and
|
| 356 |
+
their relative abundances at different redshifts provide clues about the universe's
|
| 357 |
+
evolution. The distribution and clustering of these galaxies help measure the
|
| 358 |
+
large-scale structure of the universe, which is directly influenced by dark energy.
|
| 359 |
+
|
| 360 |
+
Automated classification systems like this one enable the analysis of millions of
|
| 361 |
+
galaxies from current and future surveys, such as the Vera C. Rubin Observatory's
|
| 362 |
+
Legacy Survey of Space and Time (LSST). These massive datasets will provide
|
| 363 |
+
unprecedented precision in measuring dark energy's properties and understanding
|
| 364 |
+
its role in the fate of the universe.
|
| 365 |
+
""")
|
| 366 |
+
|
| 367 |
+
# Launch the demo
|
| 368 |
+
# For Hugging Face Spaces, Gradio will automatically detect and launch the demo
|
| 369 |
+
# The API error is a known Gradio bug - the app will still work for classification
|
| 370 |
if __name__ == "__main__":
|
| 371 |
+
try:
|
| 372 |
+
demo.launch(show_api=False)
|
| 373 |
+
except Exception as e:
|
| 374 |
+
# If launch fails, try without API
|
| 375 |
+
print(f"Launch error (non-critical): {e}")
|
| 376 |
+
demo.launch()
|