Spaces:
Sleeping
Sleeping
| { | |
| "ADE-Identification": { | |
| "Language": "https://huggingface.co/datasets/ade-benchmark-corpus/ade_corpus_v2", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "Pharmacology", | |
| "Data Access": "Open Access", | |
| "Applications": "ADE & Incidents", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "ADE-Extraction": { | |
| "Language": "https://huggingface.co/datasets/ade-benchmark-corpus/ade_corpus_v2", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "Pharmacology", | |
| "Data Access": "Open Access", | |
| "Applications": "ADE & Incidents", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "ADE-Drug dosage": { | |
| "Language": "https://huggingface.co/datasets/ade-benchmark-corpus/ade_corpus_v2", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "Pharmacology", | |
| "Data Access": "Open Access", | |
| "Applications": "Medication information", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "BARR2": { | |
| "Language": "https://temu.bsc.es/BARR2/datasets.html", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Concept standarization", | |
| "Clinical Stage": "Research" | |
| }, | |
| "BrainMRI-AIS": { | |
| "Language": "https://doi.org/10.1371/journal.pone.0212778.s002", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "Neurology, Radiology", | |
| "Data Access": "Open Access", | |
| "Applications": "Diagnosis", | |
| "Clinical Stage": "Diagnosis and Prognosis" | |
| }, | |
| "Cantemist-Coding": { | |
| "Language": "https://zenodo.org/record/3978041#.YzKutOxBwq0", | |
| "Task Type": "Normalization and Coding", | |
| "Clinical Context": "Oncology", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "Cantemis-NER": { | |
| "Language": "https://zenodo.org/record/3978041#.YzKutOxBwq0", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Oncology", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "Cantemis-Norm": { | |
| "Language": "https://zenodo.org/record/3978041#.YzKutOxBwq0", | |
| "Task Type": "Normalization and Coding", | |
| "Clinical Context": "Oncology", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "CARES-Area": { | |
| "Language": "https://huggingface.co/datasets/chizhikchi/CARES", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "Radiology", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "CARES ICD10 Block": { | |
| "Language": "https://huggingface.co/datasets/chizhikchi/CARES", | |
| "Task Type": "Normalization and Coding", | |
| "Clinical Context": "Radiology", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "CARES-ICD10 Chapter": { | |
| "Language": "https://huggingface.co/datasets/chizhikchi/CARES", | |
| "Task Type": "Normalization and Coding", | |
| "Clinical Context": "Radiology", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "CARES-ICD10 Subblock": { | |
| "Language": "https://huggingface.co/datasets/chizhikchi/CARES", | |
| "Task Type": "Normalization and Coding", | |
| "Clinical Context": "Radiology", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "CHIP-CDEE": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Temporal/Causality determination", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "C-EMRS": { | |
| "Language": "https:// github.com/YangzlTHU/C-EMRs", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "Radiology, Endocrinology, Pulmonology, Cardiology, Gastroenterology", | |
| "Data Access": "Open Access", | |
| "Applications": "Diagnosis", | |
| "Clinical Stage": "Diagnosis and Prognosis" | |
| }, | |
| "CodiEsp-ICD-10-CM": { | |
| "Language": "https://zenodo.org/record/3837305#.YwXJRXZBw2y", | |
| "Task Type": "Normalization and Coding", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "CodiEsp-ICD-10-PCS": { | |
| "Language": "https://zenodo.org/record/3837305#.YwXJRXZBw2y", | |
| "Task Type": "Normalization and Coding", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "ClinicalNotes-UPMC": { | |
| "Language": "https://code.google.com/archive/p/negex/downloads?page=2", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Negation identification", | |
| "Clinical Stage": "Research" | |
| }, | |
| "PPTS": { | |
| "Language": "https://www.mdpi.com/article/10.3390/diagnostics12102536/s1", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "Pulmonology", | |
| "Data Access": "Open Access", | |
| "Applications": "Diagnosis", | |
| "Clinical Stage": "Diagnosis and Prognosis" | |
| }, | |
| "CLINpt-NER": { | |
| "Language": "https://github.com/fabioacl/PortugueseClinicalNER", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Neurology", | |
| "Data Access": "Open Access", | |
| "Applications": "Procudure information", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "cMedQA": { | |
| "Language": "https://github.com/zhangsheng93/cMedQA\nhttps://github.com/zhangsheng93/cMedQA2", | |
| "Task Type": "Question Answering", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Screen & Consultation", | |
| "Clinical Stage": "Triage and Referral" | |
| }, | |
| "DialMed": { | |
| "Language": "https://github.com/f-window/DialMed/tree/main/data/dataset", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "Pulmonology, Gastroenterology, Dermatology, Pharmacology", | |
| "Data Access": "Open Access", | |
| "Applications": "Medication information", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "MIE": { | |
| "Language": "https://github.com/nlpir2020/MIE-ACL-2020/tree/master/data", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "Cardiology", | |
| "Data Access": "Open Access", | |
| "Applications": "Phenotyping", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "Ex4CDS": { | |
| "Language": "https://github.com/DFKI-NLP/Ex4CDS", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Nephrology", | |
| "Data Access": "Open Access", | |
| "Applications": "Procudure information", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "IMCS-V2-NER": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Pediatrics", | |
| "Data Access": "Open Access", | |
| "Applications": "Phenotyping", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "JP-STS": { | |
| "Language": "https://github.com/sociocom/Japanese-Clinical-STS", | |
| "Task Type": "Semantic Similarity", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Semantic relation", | |
| "Clinical Stage": "Research" | |
| }, | |
| "meddocan": { | |
| "Language": "https://github.com/PlanTL-GOB-ES/SPACCC_MEDDOCAN", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "De-identification", | |
| "Clinical Stage": "Research" | |
| }, | |
| "MEDIQA 2019-RQE": { | |
| "Language": "https://www.aicrowd.com/challenges/mediqa-2019-recognizing-question-entailment-rqe#datasets", | |
| "Task Type": "Natural Language Inference", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Screen & Consultation", | |
| "Clinical Stage": "Triage and Referral" | |
| }, | |
| "MTS": { | |
| "Language": "https://mtsamples.com/", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Data organization", | |
| "Clinical Stage": "Research" | |
| }, | |
| "MTS-Temporal": { | |
| "Language": "https://github.com/medesto/timeline-reconstruction", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Pediatrics, Psychology", | |
| "Data Access": "Open Access", | |
| "Applications": "Temporal/Causality determination", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "NorSynthClinical-NER": { | |
| "Language": "https://github.com/ltgoslo/NorSynthClinical", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Cardiology", | |
| "Data Access": "Open Access", | |
| "Applications": "Temporal/Causality determination", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "NorSynthClinical-RE": { | |
| "Language": "https://github.com/ltgoslo/NorSynthClinical", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "Cardiology", | |
| "Data Access": "Open Access", | |
| "Applications": "Temporal/Causality determination", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "NUBES": { | |
| "Language": "https://github.com/Vicomtech/NUBes-negation-uncertainty-biomedical-corpus", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Negation identification", | |
| "Clinical Stage": "Research" | |
| }, | |
| "MEDIQA 2023-chat-A": { | |
| "Language": "https://github.com/abachaa/MTS-Dialog", | |
| "Task Type": "Summarization", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Encounter summarization", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "MEDIQA 2023-sum-A": { | |
| "Language": "https://github.com/abachaa/MTS-Dialog", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Data organization", | |
| "Clinical Stage": "Research" | |
| }, | |
| "MEDIQA 2023-sum-B": { | |
| "Language": "https://github.com/abachaa/MTS-Dialog", | |
| "Task Type": "Summarization", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Encounter summarization", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "RuMedDaNet": { | |
| "Language": "https://github.com/sberbank-ai-lab/RuMedBench/tree/main/data/RuMedDaNet", | |
| "Task Type": "Natural Language Inference", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Screen & Consultation", | |
| "Clinical Stage": "Triage and Referral" | |
| }, | |
| "CBLUE-CDN": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Normalization and Coding", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Billing & Coding", | |
| "Clinical Stage": "Discharge and Administration" | |
| }, | |
| "CHIP-CTC": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Clinical trial matching", | |
| "Clinical Stage": "Research" | |
| }, | |
| "CHIP-MDCFNPC": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Phenotyping", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "MedDG": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Question Answering", | |
| "Clinical Context": "Gastroenterology", | |
| "Data Access": "Open Access", | |
| "Applications": "Screen & Consultation", | |
| "Clinical Stage": "Triage and Referral" | |
| }, | |
| "IMCS-V2-SR": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "Pediatrics", | |
| "Data Access": "Open Access", | |
| "Applications": "Phenotyping", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "IMCS-V2-MRG": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Summarization", | |
| "Clinical Context": "Pediatrics", | |
| "Data Access": "Open Access", | |
| "Applications": "Encounter summarization", | |
| "Clinical Stage": "Initial Assessment" | |
| }, | |
| "IMCS-V2-DAC": { | |
| "Language": "https://tianchi.aliyun.com/dataset/95414", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "Pediatrics", | |
| "Data Access": "Open Access", | |
| "Applications": "Screen & Consultation", | |
| "Clinical Stage": "Triage and Referral" | |
| }, | |
| "RuDReC-NER": { | |
| "Language": "https://github.com/cimm-kzn/RuDReC/tree/master", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Pharmacology", | |
| "Data Access": "Open Access", | |
| "Applications": "ADE & Incidents", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "NorSynthClinical-PHI": { | |
| "Language": "https://github.com/synnobra/NorSynthClinical-PHI", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Cardiology", | |
| "Data Access": "Open Access", | |
| "Applications": "De-identification", | |
| "Clinical Stage": "Research" | |
| }, | |
| "RuCCoN": { | |
| "Language": "https://github.com/AIRI-Institute/RuCCoN", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Pulmonology", | |
| "Data Access": "Open Access", | |
| "Applications": "Procudure information", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "CLISTER": { | |
| "Language": "https://gitlab.inria.fr/codeine/clister", | |
| "Task Type": "Semantic Similarity", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Semantic relation", | |
| "Clinical Stage": "Research" | |
| }, | |
| "GraSSCo PHI": { | |
| "Language": "https://zenodo.org/records/11502329", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "De-identification", | |
| "Clinical Stage": "Research" | |
| }, | |
| "IFMIR-Incident type": { | |
| "Language": "https://figshare.com/articles/dataset/A_corpus_of_machine-annotated_incident_reports_of_medication_errors/21541650/3?file=41222790", | |
| "Task Type": "Text Classification", | |
| "Clinical Context": "Pharmacology", | |
| "Data Access": "Open Access", | |
| "Applications": "ADE & Incidents", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "IFMIR-NER": { | |
| "Language": "https://figshare.com/articles/dataset/A_corpus_of_machine-annotated_incident_reports_of_medication_errors/21541650/3?file=41222790", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "Pharmacology", | |
| "Data Access": "Open Access", | |
| "Applications": "ADE & Incidents", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "IFMIR-NER&factuality": { | |
| "Language": "https://figshare.com/articles/dataset/A_corpus_of_machine-annotated_incident_reports_of_medication_errors/21541650/3?file=41222790", | |
| "Task Type": "Event Extraction", | |
| "Clinical Context": "Pharmacology", | |
| "Data Access": "Open Access", | |
| "Applications": "ADE & Incidents", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "iCorpus": { | |
| "Language": "https://ai-health.m.u-tokyo.ac.jp/home/research/corpus", | |
| "Task Type": "Named Entity Recognition", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Procudure information", | |
| "Clinical Stage": "Treatment and Intervention" | |
| }, | |
| "icliniq-10k": { | |
| "Language": "https://github.com/Kent0n-Li/ChatDoctor", | |
| "Task Type": "Question Answering", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Screen & Consultation", | |
| "Clinical Stage": "Triage and Referral" | |
| }, | |
| "HealthCareMagic-100k": { | |
| "Language": "https://github.com/Kent0n-Li/ChatDoctor", | |
| "Task Type": "Question Answering", | |
| "Clinical Context": "General", | |
| "Data Access": "Open Access", | |
| "Applications": "Screen & Consultation", | |
| "Clinical Stage": "Triage and Referral" | |
| } | |
| } |