Added --output, --erase, and --save-nifti flags, as with the other evaluation scripts

Refactoring

Minor improvements

Skip the background segmentation mask

Skip the background segmentation mask

Create output dir if it doesn't exist

Added input arguments to change the CSV file, separator and output directory

Merge pull request #17 from andreped/master

feature: added post hoc analysis script for paper

Merge pull request #16 from andreped/master

plos one update

Merge remote-tracking branch 'origin/master'

Minor clean up

Added acknowledgements

Update README.md

Update README.md

Update README.md

Update README.md

Update README.md

Merge pull request #9 from andreped/arXiv-update

updated cite and info in README post-submission

Update README.md

Merge pull request #5 from andreped/readme-refactoring

Merge pull request #7 from andreped/ignore

Merge pull request #6 from andreped/license

ignore .vs/ and __pycache__/

Added MIT license - to be adjusted if needed

added placeholder text to README - to be improved

Merge pull request #3 from andreped/master

Merge branch 'jpdefrutos:master' into master

ignore .idea/, fixed typo

removed redundant .idea/ folder

Updating latest changes DDMR

Updating latest changes

Following TF deprecation warnings

Added "step" parameters to reduce the interpolation resolution and memory footprint

COMET train segmentation guided

Update

Update

Updated train scripts

# threads is automatically set using os.cpu_count()

Added the Method column to the CSV file, to distinguish better between SyN and SyNCC results

Renamed the folder to SoA_methods to hold the evaluation script of other methods

ANTs evaluation script

Added segmentation plots after evaluation

Added COMET zoom factors

Merge remote-tracking branch 'origin/master'

gitignore and requirements

Create README.md

ANTs script