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Duplicated from Paper2Agent/alphagenome_agent

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Paper2Agent_decoupleRpy

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Paper2Agent_decoupleRpy / server.py

Commit History

ADR-0001 Phase 1, steps 5-6 (T5): decoupler_meta_analyze + A->B->refuse wiring

c45a617

avoigt1121 Claude Opus 4.8 commited on Jun 19

Phase 1: Add decoupler_load_url_counts for flat matrix loading

a675e3e

avoigt1121 Claude Sonnet 4.6 commited on Jun 5

Revert HTTP tool-call approach; fix rpy2 threading race

9287c02

avoigt1121 Claude Sonnet 4.6 commited on Jun 3

Reduce redundant tool calls and pre-warm limma at startup

8ffb6b9

avoigt1121 Claude Sonnet 4.6 commited on Jun 3

Eliminate per-call subprocess overhead with persistent HTTP MCP server

b706ec1

avoigt1121 Claude Sonnet 4.6 commited on Jun 3

Add in-memory dataset cache to eliminate GEO re-downloads

8f9b089

avoigt1121 Claude Sonnet 4.6 commited on Jun 2

Flatten mcp/ folder and move mcp_server/ into src/

00c8107

avoigt1121 Claude Sonnet 4.6 (1M context) commited on May 11