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Duplicated from Paper2Agent/alphagenome_agent

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Paper2Agent_decoupleRpy

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Paper2Agent_decoupleRpy / src /uploads

70 kB

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5 contributors

History: 7 commits

Annie Voigt

feat(upload): assemble raw counts/TPM/metadata into an h5ad inside the gate

1644d2e 14 days ago

__init__.py

2.03 kB
fix(uploads): scan before parse; drop ungated URL/HF originals (ADR-0011) 26 days ago
assembly.py

12.2 kB
feat(upload): assemble raw counts/TPM/metadata into an h5ad inside the gate 14 days ago
drafting.py

9.04 kB
style: apply ruff lint --fix + ruff format across the tree about 2 months ago
posture.py

2.23 kB
fix(uploads): make the deployed malware-scan posture explicit and honest 26 days ago
promotion.py

3.16 kB
style: apply ruff lint --fix + ruff format across the tree about 2 months ago
records.py

5.09 kB
fix(uploads): make the deployed malware-scan posture explicit and honest 26 days ago
scanning.py

16.7 kB
feat(upload): assemble raw counts/TPM/metadata into an h5ad inside the gate 14 days ago
staging.py

9.91 kB
feat(upload): assemble raw counts/TPM/metadata into an h5ad inside the gate 14 days ago
validation.py

9.69 kB
style: apply ruff lint --fix + ruff format across the tree about 2 months ago