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pdac-genomics-agent-dev

3.14 MB

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4 contributors

History: 116 commits

avoigt1121

Claude Opus 5

merge: label-join decided as route (c) — no cBioPortal PDAC subtype call exists

83b08b3 11 days ago

.github
ci: weekly curated-artifact freshness check (ADR-0007) 28 days ago
deploy
feat(deploy): establish the dev lane — hf-dev remote, dev branch, mirror-hook fix 20 days ago
docs
subtype-join: close the cohort search as a negative result; state orchestrator-only on the tab 11 days ago
scripts
feat(deploy): establish the dev lane — hf-dev remote, dev branch, mirror-hook fix 20 days ago
security
M3: BYOD upload + deploy hardening about 1 month ago
src
fix(ui): offer the SV modality; tests own the unsupported-modality refusal 11 days ago
tests
merge: raw-result legibility — summary table, abridged JSON, full-payload download 11 days ago
.env.example

1.23 kB
C3: the +URL in the User-Agent is the contact channel — no email needed about 1 month ago
.gitattributes

2.01 kB
fix: close three silent-fallback wrong answers (modality, test floor, BYOD fusions) 20 days ago
.gitignore

160 Bytes
M3 deploy surface: gradio_ui.py + src/server.py about 1 month ago
CLAUDE.md

13.7 kB
feat(auth): decide the whoami cache's TTL and HF-outage behaviour (ADR-0009) 13 days ago
Makefile

1.28 kB
hooks: keep the GitHub mirror in step with every deploy 27 days ago
README.md

4.73 kB
docs: README reflects deployed+gated reality; dev ALLOWED_IDS roster recorded 11 days ago
TODO.md

66.1 kB
merge: label-join decided as route (c) — no cBioPortal PDAC subtype call exists 11 days ago
access.py

3.94 kB
M3: BYOD upload + deploy hardening about 1 month ago
audit.py

5.38 kB
feat(sv): structural-variant modality (ADR-0008) — fusions, with three gates 20 days ago
gradio_ui.py

62.5 kB
merge: label-join decided as route (c) — no cBioPortal PDAC subtype call exists 11 days ago
licenses.py

19.9 kB
feat(panel): widen 19 → 29 genes (HR + MMR), and stop silently dropping uncurated genes 20 days ago
logging_sink.py

4.26 kB
feat(sv): structural-variant modality (ADR-0008) — fusions, with three gates 20 days ago
memory.md

166 kB
merge: label-join decided as route (c) — no cBioPortal PDAC subtype call exists 11 days ago
requirements.txt

522 Bytes
M3 deploy surface: gradio_ui.py + src/server.py about 1 month ago