README.md

metadata

title: RECISTto3D
emoji: 🩺
colorFrom: blue
colorTo: indigo
sdk: gradio
sdk_version: 6.19.0
app_file: app.py
python_version: '3.12'
pinned: false
license: apache-2.0
short_description: RECIST to 3D — CPU NIfTI load debug

RECISTto3D (CPU / NIfTI-debug)

Gradio viewer for RECIST-prompted 3D CT segmentation.

Behavior on this CPU Space

• Download the three checkpoints from HF Model repos at startup (~670MB):
  • wanglab/MedSAM2 → MedSAM2 + EfficientMedSAM2 .pt
  • nnInteractive/nnInteractive → nnInteractive_v1.0/.../checkpoint_final.pth
• Do not load them into memory (SKIP_WEIGHTS auto-on for CPU Spaces)
• Upload / example NIfTI loading works (latency debugging)
• RUN stays disabled until SKIP_WEIGHTS=0 + ZeroGPU / GPU

Overrides:

• DOWNLOAD_WEIGHTS=0 — skip download
• SKIP_WEIGHTS=0 — load weights into memory (needs full model deps)