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microbe-model / scripts /03_train_baseline.py

Commit History

Deploy app from main@a3254bf (no paper/ binaries)

0ed74db

Running

Miyu Horiuchi commited on 4 days ago

Add MediaDive-derived features (medium pH, NaCl, n_media) — all 4 targets improve

5df9ef8

Miyu Horiuchi Claude Opus 4.7 (1M context) commited on 28 days ago

Expand training corpus to 46K strains: species-name → NCBI genome + isolation features

f0f1d93

Miyu Horiuchi Claude Opus 4.7 (1M context) commited on 28 days ago

Fix predictions parquet type mix + plumb feature_cols through eval

bbbea9d

Miyu Horiuchi commited on Apr 27

Eval report enhancements: TL;DR + per-strain predictions + per-family error

4b79970

Miyu Horiuchi Claude Opus 4.7 (1M context) commited on Apr 26

Add eval report generator + training table persistence + group-col override

d082ced

Miyu Horiuchi Claude Opus 4.7 (1M context) commited on Apr 26

Streaming fetch+featurize pipeline + 6× pyrodigal speedup + GCA version resolution

383bb62

Miyu Horiuchi Claude Opus 4.7 (1M context) commited on Apr 26