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| [ | |
| { | |
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| "paperTitle": "Comparative shotgun proteomics analysis of wheat gluten proteins", | |
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| "paperTitle": "Comparative shotgun proteomics analysis of wheat gluten proteins", | |
| "paperLink": "https://doi.org/10.1016/j.crfs.2025.101095", | |
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| { | |
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| "Grid-only profile \u2014 split-rigor / class-balance / seed ablations skipped (still feeds Q1/Q2 stats)." | |
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| "Grid-only profile \u2014 split-rigor / class-balance / seed ablations skipped (still feeds Q1/Q2 stats)." | |
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| "paperTitle": "Targeted hydrolysis of native potato protein A novel workflow for obtaining hydrolysates with improved interfacial properties", | |
| "paperLink": "https://doi.org/10.1016/j.foodhyd.2022.108299", | |
| "rawMaterial": "Potato protein isolate", | |
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| { | |
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| "species": "Potato (Solanum tuberosum)", | |
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| "paperTitle": "Screening for Metal-Chelating Activity in Potato Protein Hydrolysates Using Surface Plasmon Resonance and Peptidomics", | |
| "paperLink": "https://doi.org/10.3390/antiox13030346", | |
| "rawMaterial": "Potato protein isolate (Protafy 130)", | |
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| "enzyme": "Alcalase then flavourzyme", | |
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| "paperTitle": "Screening for Metal-Chelating Activity in Potato Protein Hydrolysates Using Surface Plasmon Resonance and Peptidomics", | |
| "paperLink": "https://doi.org/10.3390/antiox13030346", | |
| "rawMaterial": "Potato protein isolate (Protafy 130)", | |
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| { | |
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| "species": "Potato (Solanum tuberosum)", | |
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| "paperTitle": "Screening for Metal-Chelating Activity in Potato Protein Hydrolysates Using Surface Plasmon Resonance and Peptidomics", | |
| "paperLink": "https://doi.org/10.3390/antiox13030346", | |
| "rawMaterial": "Potato protein isolate (Protafy 130)", | |
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| }, | |
| { | |
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| "species": "Potato (Solanum tuberosum)", | |
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| "paperTitle": "Screening for Metal-Chelating Activity in Potato Protein Hydrolysates Using Surface Plasmon Resonance and Peptidomics", | |
| "paperLink": "https://doi.org/10.3390/antiox13030346", | |
| "rawMaterial": "Potato protein isolate (Protafy 130)", | |
| "flags": [] | |
| }, | |
| { | |
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| "species": "Faba bean (Vicia faba)", | |
| "speciesKey": "faba", | |
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| "taxId": "3906", | |
| "proteome": "V. faba (UP001157006, flagged)", | |
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| "paperTitle": "Functional, nutritional, antioxidant, sensory properties and comparative peptidomic profile of faba bean (Vicia faba, L.) seed protein hydrolysates and fortified apple juice", | |
| "paperLink": "https://doi.org/10.1016/j.foodchem.2020.127120", | |
| "rawMaterial": "faba bean protein extract (from seeds)", | |
| "flags": [] | |
| }, | |
| { | |
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| "hcode": "H7", | |
| "species": "Red rice bran (Oryza sativa)", | |
| "speciesKey": "red_rice", | |
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| "msProtocol": "nano-LC-MS/MS", | |
| "taxId": "39947", | |
| "proteome": "UP000059680", | |
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| "paperTitle": "Tyrosinase inhibition and enzyme kinetics of red rice bran protein peptides Mechanism, identification, in silico exploration, and experimental validation", | |
| "paperLink": "https://doi.org/10.1016/j.fbio.2025.106319", | |
| "rawMaterial": "red rice bran protein (RRBP)", | |
| "flags": [] | |
| }, | |
| { | |
| "code": "H9", | |
| "hcode": "H9", | |
| "species": "Soybean (Glycine max)", | |
| "speciesKey": "soy", | |
| "enzyme": "Trypsin", | |
| "msProtocol": "nano-LC-MS/MS", | |
| "taxId": "3847", | |
| "proteome": "G. max reference", | |
| "proteomeApprox": false, | |
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| "paperTitle": "Peptidomics Analysis of Soy Protein Hydrolysates Antioxidant Properties and Mechanism of their Inhibition of the Oxidation of Palm Olein during Frying Cycles", | |
| "paperLink": "https://doi.org/10.3390/foods12183498", | |
| "rawMaterial": "Soybean Meal", | |
| "flags": [] | |
| }, | |
| { | |
| "code": "H11A", | |
| "hcode": "H11", | |
| "species": "Spirulina (Arthrospira platensis)", | |
| "speciesKey": "spirulina", | |
| "enzyme": "Alcalase", | |
| "msProtocol": "UPLC-MS/MS", | |
| "taxId": "118562", | |
| "proteome": "UP000006803 (NIES-39 stand-in)", | |
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| "bestModel": "mlp", | |
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| "paperTitle": "Investigation of Peptides Containing Branched-Chain Amino Acids from Arthrospira platensis Through A Peptidomics Workflow", | |
| "paperLink": "https://doi.org/10.1007/s11947-023-03147-5", | |
| "rawMaterial": "Spirulina", | |
| "flags": [] | |
| }, | |
| { | |
| "code": "H11B", | |
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| "species": "Spirulina (Arthrospira platensis)", | |
| "speciesKey": "spirulina", | |
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| "msProtocol": "UPLC-MS/MS", | |
| "taxId": "118562", | |
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| "paperTitle": "Investigation of Peptides Containing Branched-Chain Amino Acids from Arthrospira platensis Through A Peptidomics Workflow", | |
| "paperLink": "https://doi.org/10.1007/s11947-023-03147-5", | |
| "rawMaterial": "Spirulina", | |
| "flags": [] | |
| }, | |
| { | |
| "code": "H11C", | |
| "hcode": "H11", | |
| "species": "Spirulina (Arthrospira platensis)", | |
| "speciesKey": "spirulina", | |
| "enzyme": "Papain", | |
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| "taxId": "118562", | |
| "proteome": "UP000006803 (NIES-39 stand-in)", | |
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| "paperTitle": "Investigation of Peptides Containing Branched-Chain Amino Acids from Arthrospira platensis Through A Peptidomics Workflow", | |
| "paperLink": "https://doi.org/10.1007/s11947-023-03147-5", | |
| "rawMaterial": "Spirulina", | |
| "flags": [] | |
| }, | |
| { | |
| "code": "AR-T", | |
| "hcode": "AR", | |
| "species": "Arabidopsis thaliana", | |
| "speciesKey": "arabidopsis", | |
| "enzyme": "Trypsin", | |
| "msProtocol": "LC-MS/MS", | |
| "taxId": "3702", | |
| "proteome": "Araport11 (release 201606)", | |
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| "bestModel": "xgb", | |
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| "headlineAuroc": 0.851, | |
| "paperTitle": "Arabidopsis seed peptides (PeptideAtlas build 510) \u2014 PXD012708 Arabidopsis seeds (fully tryptic)", | |
| "paperLink": "https://www.ebi.ac.uk/pride/archive/projects/PXD012708", | |
| "rawMaterial": "Arabidopsis seed", | |
| "flags": [ | |
| "Out-of-distribution transfer model (Arabidopsis seed); useful for cross-species screening" | |
| ] | |
| }, | |
| { | |
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| "species": "Arabidopsis thaliana", | |
| "speciesKey": "arabidopsis", | |
| "enzyme": "Trypsin (semi-tryptic)", | |
| "msProtocol": "LC-MS/MS", | |
| "taxId": "3702", | |
| "proteome": "Araport11 (release 201606)", | |
| "proteomeApprox": false, | |
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| "bestModel": "xgb", | |
| "bestFeatureSet": "pep_phys", | |
| "gridAuroc": 0.8534, | |
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| "brier": 0.1762, | |
| "ece": 0.1305, | |
| "headlineAuroc": 0.8534, | |
| "paperTitle": "Arabidopsis seed peptides (PeptideAtlas build 510) \u2014 PXD012708 Arabidopsis seeds (semi-tryptic)", | |
| "paperLink": "https://www.ebi.ac.uk/pride/archive/projects/PXD012708", | |
| "rawMaterial": "Arabidopsis seed", | |
| "flags": [ | |
| "Out-of-distribution transfer model (Arabidopsis seed); useful for cross-species screening" | |
| ] | |
| }, | |
| { | |
| "code": "AR-SF", | |
| "hcode": "AR", | |
| "species": "Arabidopsis thaliana", | |
| "speciesKey": "arabidopsis", | |
| "enzyme": "Trypsin", | |
| "msProtocol": "LC-MS/MS", | |
| "taxId": "3702", | |
| "proteome": "Araport11 (release 201606)", | |
| "proteomeApprox": false, | |
| "nPos": 59997, | |
| "bestModel": "xgb", | |
| "bestFeatureSet": "pep_phys", | |
| "gridAuroc": 0.8657, | |
| "tunedCvAuroc": 0.8657, | |
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| "calibF1": 0.8209, | |
| "brier": 0.1412, | |
| "ece": 0.0303, | |
| "headlineAuroc": 0.8657, | |
| "paperTitle": "Arabidopsis seed peptides (PeptideAtlas build 510) \u2014 PXD013868 Arabidopsis seed full proteome", | |
| "paperLink": "https://www.ebi.ac.uk/pride/archive/projects/PXD013868", | |
| "rawMaterial": "Arabidopsis seed", | |
| "flags": [ | |
| "Out-of-distribution transfer model (Arabidopsis seed); useful for cross-species screening" | |
| ] | |
| } | |
| ] | |