Spaces:
Running
Running
Update app.py
Browse files
app.py
CHANGED
|
@@ -16,13 +16,9 @@ def predict(input_mol, view_str, chains):
|
|
| 16 |
chain_str = ""
|
| 17 |
chain_dict = json.loads(chains)
|
| 18 |
|
| 19 |
-
print(chain_dict)
|
| 20 |
-
print(type(chain_dict))
|
| 21 |
-
|
| 22 |
# sort keys in dict and add colors to chain_str
|
| 23 |
for chain in sorted(chain_dict.keys()):
|
| 24 |
-
chain_str += f" {chain_dict[chain]}"
|
| 25 |
-
print(chain_str, "chainstring")
|
| 26 |
os.system(f"cellscape cartoon --pdb {input_mol.name} --outline chain --colors {chain_str} --depth flat --back_outline --view view_matrix --save outline_all.svg")
|
| 27 |
|
| 28 |
#read content of file
|
|
|
|
| 16 |
chain_str = ""
|
| 17 |
chain_dict = json.loads(chains)
|
| 18 |
|
|
|
|
|
|
|
|
|
|
| 19 |
# sort keys in dict and add colors to chain_str
|
| 20 |
for chain in sorted(chain_dict.keys()):
|
| 21 |
+
chain_str += f" '{chain_dict[chain]}'"
|
|
|
|
| 22 |
os.system(f"cellscape cartoon --pdb {input_mol.name} --outline chain --colors {chain_str} --depth flat --back_outline --view view_matrix --save outline_all.svg")
|
| 23 |
|
| 24 |
#read content of file
|