app.py

from transformers import pipeline
import streamlit as st

col_left, col_middle, col_right= st.columns(3)
col_middle.title("MedBotDash")
st.divider()

@st.cache_resource()
def load_model():
    model = pipeline("token-classification", 
                    model="Clinical-AI-Apollo/Medical-NER", 
                    aggregation_strategy='simple')
    return model

pipe = load_model()

st.subheader("Enter Detailed Description of your condition")
condition = st.text_input("enter the condition")

data = pipe(condition)

#st.write(data)

severity = []
sign_symptom = []
biological_structure = []
age = []
sex = []
lab_value = []

# Iterate through the data and append words to their respective lists based on entity_group
for entity in data:
    if entity['entity_group'] == 'SEVERITY':
        severity.append(entity['word'])
    elif entity['entity_group'] == 'SIGN_SYMPTOM':
        sign_symptom.append(entity['word'])
    elif entity['entity_group'] == 'BIOLOGICAL_STRUCTURE':
        biological_structure.append(entity['word'])
    elif entity['entity_group'] == 'AGE':
        age.append(entity['word'])
    elif entity['entity_group'] == 'SEX':
        sex.append(entity['word'])
    elif entity['entity_group'] == 'LAB_VALUE':
        lab_value.append(entity['word'])

col1, col2= st.columns(2)
col1.metric("Age", age[0] if age else 'NA')
col2.metric("Sex", sex[0] if sex else 'NA')

st.divider()   

sign_symptom = set(sign_symptom)
severity = set(severity)
biological_structure = set(biological_structure)
age = set(age)
sex = set(age)
lab_value = set(lab_value)

tab1, tab2, tab3 = st.tabs(["Signs", "Biological Structure", "Severity"])
#st.subheader("Signs")

with tab1:
    for sign in sign_symptom:
        st.text(sign)

#st.subheader("Severity")

with tab2:
    for bio in biological_structure:
        st.text(bio)

with tab3:
    for severity in severity:
        st.text(severity)
    
#st.subheader("Biological Structure")