CellFlux / README.md
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CellFlux Models and Generated Images

This repository contains models and generated images for three methods across three datasets.

Repository Structure

β”œβ”€β”€ model/
β”‚   β”œβ”€β”€ cellflux/
β”‚   β”‚   β”œβ”€β”€ bbbc021/
β”‚   β”‚   β”œβ”€β”€ rxrx1/
β”‚   β”‚   └── cpg0000/
β”‚   β”œβ”€β”€ impa/
β”‚   β”‚   β”œβ”€β”€ bbbc021/
β”‚   β”‚   β”œβ”€β”€ rxrx1/
β”‚   β”‚   └── cpg0000/
β”‚   └── phendiff/
β”‚       β”œβ”€β”€ bbbc021/
β”‚       β”œβ”€β”€ rxrx1/
β”‚       └── cpg0000/
└── images/
    β”œβ”€β”€ cellflux/
    β”œβ”€β”€ impa/
    └── phendiff/

Methods

  • CellFlux: Cell image generation using flow matching
  • IMPA: Image generation method
  • PhenDiff: Phenotype diffusion model

Datasets

  • BBBC021: Cell imaging dataset
  • RxRx1: Drug screening dataset
  • CPG0000: Cell painting dataset