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metadata
license: apache-2.0
tags:
  - protein language model
  - generated_from_trainer
datasets:
  - train
metrics:
  - spearmanr
base_model: lightonai/RITA_s
model-index:
  - name: tape-fluorescence-prediction-RITA_s
    results:
      - task:
          type: text-classification
          name: Text Classification
        dataset:
          name: cradle-bio/tape-fluorescence
          type: train
        metrics:
          - type: spearmanr
            value: 0.2955275250425323
            name: Spearmanr

tape-fluorescence-prediction-RITA_s

This model is a fine-tuned version of lightonai/RITA_s on the cradle-bio/tape-fluorescence dataset. It achieves the following results on the evaluation set:

  • Loss: 0.5855
  • Spearmanr: 0.2955

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

  • learning_rate: 5e-05
  • train_batch_size: 32
  • eval_batch_size: 32
  • seed: 42
  • gradient_accumulation_steps: 128
  • total_train_batch_size: 4096
  • optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
  • lr_scheduler_type: linear
  • num_epochs: 10
  • mixed_precision_training: Native AMP

Training results

Training Loss Epoch Step Validation Loss Spearmanr
4.3595 0.85 4 0.7057 0.0940
0.8654 1.85 8 0.6873 0.1280
0.8292 2.85 12 0.6835 0.2290
0.8212 3.85 16 0.6837 0.3110
0.8191 4.85 20 0.6799 0.3281
0.8137 5.85 24 0.6748 0.3277
0.8057 6.85 28 0.6592 0.3162
0.7769 7.85 32 0.6283 0.3065
0.7382 8.85 36 0.6103 0.2795
0.5991 9.85 40 0.5855 0.2955

Framework versions

  • Transformers 4.18.0
  • Pytorch 1.11.0
  • Datasets 2.1.0
  • Tokenizers 0.12.1