| | --- |
| | datasets: |
| | - yangyz1230/space |
| | --- |
| | |
| | This is the official implementation of the ICML 2025 poster paper "SPACE: Your Genomic Profile Predictor is a Powerful DNA Foundation Model". |
| |
|
| | ## Usage |
| |
|
| | You should first download the source code from github: |
| | ``` |
| | git clone https://github.com/ZhuJiwei111/SPACE |
| | cd SPACE |
| | ``` |
| |
|
| | Then you can access the model through: |
| | ``` |
| | from model.modeling_space import Space |
| | |
| | model_name_or_path = "yangyz1230/space" |
| | model = Space.from_pretrained(model_name_or_path) |
| | ``` |
| |
|
| | ## Citation |
| |
|
| | ``` |
| | @inproceedings{yang2025space, |
| | title={{SPACE}: Your Genomic Profile Predictor is a Powerful {DNA} Foundation Model}, |
| | author={Zhao Yang and Jiwei Zhu and Bing Su}, |
| | booktitle={Forty-second International Conference on Machine Learning}, |
| | year={2025}, |
| | url={https://openreview.net/forum?id=o4L9y4Jetm} |
| | } |
| | ``` |
| |
|
| | ``` |
| | @misc{yang2025spacegenomicprofilepredictor, |
| | title={SPACE: Your Genomic Profile Predictor is a Powerful DNA Foundation Model}, |
| | author={Zhao Yang and Jiwei Zhu and Bing Su}, |
| | year={2025}, |
| | eprint={2506.01833}, |
| | archivePrefix={arXiv}, |
| | primaryClass={cs.LG}, |
| | url={https://arxiv.org/abs/2506.01833}, |
| | } |
| | ``` |