Commit History

2 days ago

  1. Merge branch 'main' of github.com:Angione-Lab/Shape2Force

    adffd84
  2. results: remove merge-conflict markers (WS and Mac values identical)

    1fcc8e1
  3. Merge branch 'main' of github.com:Angione-Lab/Shape2Force

    b858c60
  4. S2FApp: record input image SHA-256 in reports

    b01d4cd
  5. Resolve merge: results identical, keep LF version

    1d59d1a
  6. Merge branch 'main' of github.com:Angione-Lab/Shape2Force

    b74cd3b
  7. updated

    8f0c0ae

3 days ago

  1. Update .gitattributes to include CSV files with LF line endings and ensure PNG files are tracked by LFS. Modify .gitignore to exclude output directories while keeping .gitkeep for version control.

    dc31c70
  2. Update terminology to reflect "traction stress map" instead of "force map". Adjust README.md for clarity on app version and refine comments in download_ckp.py for better understanding of checkpoint downloads.

    c0ccb4f
  3. added experiments files

    3bd9573
  4. added dark theme support

    8e23320
  5. Update Dockerfile to pin numpy and adjust PyTorch installation method for compatibility with pip, ensuring proper handling of dependencies from PyPI and the PyTorch index.

    0fd41bf
  6. S2FApp v1.1.0: units (Pa, µm, nN), provenance in reports, FN spheroid default, force-region metrics on, batch PDF report and TIFF (Pa) export

    9268de2

4 days ago

  1. configs: image-only ablation variants

    fc5c00d
  2. run_all: auto-resume crashed jobs; spheroid colour scale 50 Pa

    3c48411
  3. eval: keep models without substrate setting in summary

    f557147

5 days ago

  1. experiments: two-phase training protocol

    90ed5f2
  2. eval: skip unfinished runs; PCI GPU order

    5004189
  3. audit and base

    b7b2a38

6 days ago

  1. tiff warning fix

    6ec4b59
  2. experiments: dataset audit, evaluation, baselines and ablations

    1d4bac8

  1. added DOI

    Unverified signature
    23ab7e2

  1. fix def loss

    bae9663

  1. roll back remaining batch result option

    f537675
  2. optimised, removed dead codes

    7068f5c
  3. Refactor sidebar layout for improved organization and styling. Grouped model selection, conditions, and force scale into distinct containers. Updated CSS for sidebar panels to enhance visual consistency and usability.

    8bb2deb
  4. upgraded streamlit

    19d247f

  1. more stable options

    c0bd297

  1. changes reverted back

    8b3cb34
  2. updated

    e9bdee3
  3. removed system status

    4b067f1

  1. fix iframe scroll

    0b339bc
  2. fixed scrolling left panel

    72d0740
  3. fix combobox of examples

    7df354b
  4. Implemented batch processing for predictions to optimize memory usage and added progress tracking. Updated constants for batch inference size and adjusted contour drawing parameters for better visibility in UI elements.

    6727da5

  1. added bg for UI

    67b648a
  2. fix autoboundary

    482c7f2
  3. scikit-image compatibility fix

    379a002
  4. fix opencv logging error

    3f953b3
  5. fixed docker numpy issue

    2c13ad6
  6. updated screenshot

    f5c367d
  7. decreased space between banner and content

    21bc31f
  8. updated UI

    0e1a816

  1. added batch mode and corrected force scale

    4b93ba5
  2. added different scales

    af887b9

  1. corrected memory issue

    4354514
  2. added psutil for live monitoring resources

    3480865
  3. added small UI status pane for computational resources monitoring

    124c6eb
  4. optimised

    607b168
  5. fixed

    b16c4e9