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Finetuned Cellpose Models for Retinal Cell Segmentation

Base Model

  • head: cellpose
  • backbone: DINOv3 ViT Large
  • cellpose model name: cpdino

cpdino_BRN3A

biological specs

  • label: BRN3A
  • target cell type: RGC

training data image specs

  • magnification: 20x
  • file format: .oir
  • projection: max projection
  • resolution: 1024x1024
  • storage data type: uint16
  • significant bits: 16

cpdino_RPBMS

biological specs

  • label: RPBMS
  • target cell type: RGC

training data image specs

  • magnification: 20x
  • file format: .oir
  • projection: max projection
  • resolution: 1024x1024
  • storage data type: uint16
  • significant bits: 16

cpdino_RGC-Snap

biological specs

  • label: RGC tagged with RFP
  • target cell type: RGC

training data image specs

  • magnification: 10x
  • file format: .oir
  • projection: n/a (or max)
  • resolution: 2048x2048
  • storage data type: uint16
  • significant bits: 16