JohnsonLabJHU's picture
Mirror from mmzinn12 for Johnson Lab continuity
685e490 verified
|
Raw History Blame Contribute Delete
1.11 kB
# Finetuned Cellpose Models for Retinal Cell Segmentation
## **Base Model**
- **head**: cellpose
- **backbone**: DINOv3 ViT Large
- **cellpose model name**: cpdino
-
## **cpdino_BRN3A**
### *biological specs*
- **label**: BRN3A
- **target cell type**: RGC
### *training data image specs*
- **magnification**: 20x
- **file format**: .oir
- **projection**: max projection
- **resolution**: 1024x1024
- **storage data type**: uint16
- **significant bits**: 16
## **cpdino_RPBMS**
### *biological specs*
- **label**: RPBMS
- **target cell type**: RGC
### *training data image specs*
- **magnification**: 20x
- **file format**: .oir
- **projection**: max projection
- **resolution**: 1024x1024
- **storage data type**: uint16
- **significant bits**: 16
## **cpdino_RGC-Snap**
### *biological specs*
- **label**: RGC tagged with RFP
- **target cell type**: RGC
### *training data image specs*
- **magnification**: 10x
- **file format**: .oir
- **projection**: n/a (or max)
- **resolution**: 2048x2048
- **storage data type**: uint16
- **significant bits**: 16