| | --- |
| | tags: |
| | - esm |
| | - protein language model |
| | - protein sequence annotation |
| | license: cc-by-4.0 |
| | language: |
| | - en |
| | pipeline_tag: token-classification |
| | --- |
| | |
| | # Model Card for Model ID |
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| | **NOTE:** PSALM-1 has not been trained on all Pfam families, as it has been trained and benchmarked on highly-curated datasets with strict sequence similarity guarantees between train and test data. **PSALM-1b (trained on all families in Pfam 35.0) is coming soon** |
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| | PSALM-1-clan is a 69M parameter model that takes as input ESM-2 residue-level protein sequence emebeddings (unpooled) and outputs a distribution over Pfam domain clans for each amino acid in the sequence. PSALM-1-clan uses a BiLSTM followed by a stack of dense layers |
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