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History: 192 commits

hchen725

Update geneformer/emb_extractor.py

2c8d3f5 verified over 1 year ago

docs
move dict loading to function in eval utils over 1 year ago
examples
Create multi-task_cell_classification.ipynb (#418) over 1 year ago
fine_tuned_models
update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
geneformer
Update geneformer/emb_extractor.py over 1 year ago
gf-12L-30M-i2048
update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
gf-12L-95M-i4096
update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
gf-12L-95M-i4096_CLcancer
update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
gf-20L-95M-i4096
update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
gf-6L-30M-i2048
update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
.gitattributes

1.27 kB
precommit formatting over 1 year ago
.gitignore

3.08 kB
Add gitignore file almost 3 years ago
.pre-commit-config.yaml

737 Bytes
Add pre-commit config over 2 years ago
.readthedocs.yaml

396 Bytes
update readthedocs.yaml over 2 years ago
MANIFEST.in

195 Bytes
update setup with req and manifest with updated filenames over 1 year ago
README.md

8.46 kB
Adding tags to the model (#448) over 1 year ago
config.json

591 Bytes
update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
generation_config.json

90 Bytes
update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
model.safetensors

152 MB
xet

update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago
requirements.txt

362 Bytes
update transformers version to match pretrainer using accelerate over 1 year ago
setup.py

1.06 kB
Add find_packages to automatically include mtl and subpackages in setup.py (#410) over 1 year ago
training_args.bin
Detected Pickle imports (8)
- "transformers.trainer_utils.SchedulerType",
- "transformers.training_args.OptimizerNames",
- "accelerate.utils.dataclasses.DistributedType",
- "transformers.trainer_utils.HubStrategy",
- "torch.device",
- "transformers.trainer_utils.IntervalStrategy",
- "transformers.training_args.TrainingArguments",
- "accelerate.state.PartialState"
How to fix it?
4.92 kB
xet

update with 12L and 20L i4096 gc95M models, multitask and quantiz code over 1 year ago

Detected Pickle imports (8)