| --- |
| license: other |
| license_name: physionet-credentialed-health-data-1.5.0 |
| license_link: https://physionet.org/content/mimiciv/view-license/3.1/ |
| pretty_name: raw_data |
| configs: |
| - config_name: cohort_base |
| data_files: |
| - split: base |
| path: cohort/base-* |
| - config_name: cohort_with_triage |
| data_files: |
| - split: with_triage |
| path: cohort/with_triage-* |
| - config_name: ecg |
| data_files: |
| - split: ecg |
| path: ecg/ecg-* |
| - config_name: ed_only_meds |
| data_files: |
| - split: ed_only |
| path: stay_medications/ed_only-* |
| - config_name: height |
| data_files: |
| - split: height |
| path: height/height-* |
| - config_name: labs_base |
| data_files: |
| - split: train |
| path: lab_events/train-* |
| - config_name: medrecon |
| data_files: |
| - split: medrecon |
| path: pre_arrival_meds/medrecon-* |
| - config_name: meds_admitted |
| data_files: |
| - split: meds_admit |
| path: stay_medications/meds_admit-* |
| - config_name: microbiology_events |
| data_files: |
| - split: microbiology_events |
| path: microbiology/microbiology_events-* |
| - config_name: radiology_details |
| data_files: |
| - split: radiology_details |
| path: radiology/radiology_details-* |
| - config_name: triage |
| data_files: |
| - split: triage |
| path: triage/triage-* |
| - config_name: vitals |
| data_files: |
| - split: vitals |
| path: vitals/vitals-* |
| - config_name: weight |
| data_files: |
| - split: weight |
| path: weight/weight-* |
| - config_name: cohort_full |
| data_files: |
| - split: cohort_full |
| path: cohort/full-*.parquet |
| dataset_info: |
| - config_name: cohort_base |
| features: |
| - name: subject_id |
| dtype: int64 |
| - name: ed_stay_id |
| dtype: int64 |
| - name: hadm_id |
| dtype: float64 |
| - name: ed_intime |
| dtype: large_string |
| - name: ed_outtime |
| dtype: large_string |
| - name: disposition |
| dtype: large_string |
| - name: race |
| dtype: large_string |
| - name: arrival_transport |
| dtype: large_string |
| - name: first_careunit |
| dtype: large_string |
| - name: first_icu_intime |
| dtype: large_string |
| - name: base_pathway |
| dtype: large_string |
| - name: cohort_label |
| dtype: large_string |
| - name: gender |
| dtype: large_string |
| - name: anchor_age |
| dtype: int64 |
| - name: anchor_year |
| dtype: int64 |
| - name: age_at_visit |
| dtype: int64 |
| - name: dod |
| dtype: large_string |
| - name: admittime |
| dtype: large_string |
| - name: dischtime |
| dtype: large_string |
| - name: admission_type |
| dtype: large_string |
| - name: discharge_location |
| dtype: large_string |
| - name: insurance |
| dtype: large_string |
| - name: language |
| dtype: large_string |
| - name: marital_status |
| dtype: large_string |
| splits: |
| - name: base |
| num_bytes: 134237598 |
| num_examples: 399573 |
| download_size: 20691220 |
| dataset_size: 134237598 |
| - config_name: cohort_full |
| features: |
| - name: subject_id |
| dtype: int64 |
| - name: ed_stay_id |
| dtype: int64 |
| - name: hadm_id |
| dtype: int64 |
| - name: ed_intime |
| dtype: timestamp[us] |
| - name: ed_outtime |
| dtype: timestamp[us] |
| - name: disposition |
| dtype: large_string |
| - name: race |
| dtype: large_string |
| - name: arrival_transport |
| dtype: large_string |
| - name: first_careunit |
| dtype: large_string |
| - name: first_icu_intime |
| dtype: timestamp[us] |
| - name: cohort_label |
| dtype: large_string |
| - name: gender |
| dtype: large_string |
| - name: anchor_age |
| dtype: int64 |
| - name: anchor_year |
| dtype: int64 |
| - name: age_at_visit |
| dtype: int64 |
| - name: dod |
| dtype: date32 |
| - name: admittime |
| dtype: timestamp[us] |
| - name: dischtime |
| dtype: timestamp[us] |
| - name: admission_type |
| dtype: large_string |
| - name: discharge_location |
| dtype: large_string |
| - name: insurance |
| dtype: large_string |
| - name: language |
| dtype: large_string |
| - name: marital_status |
| dtype: large_string |
| - name: ed_stay_id_2 |
| dtype: float64 |
| - name: stay_window_start |
| dtype: timestamp[us] |
| - name: stay_window_end |
| dtype: timestamp[us] |
| - name: ed_boarding_time_hrs |
| dtype: float64 |
| splits: |
| - name: cohort_full |
| num_bytes: 112566261 |
| num_examples: 397675 |
| download_size: 26138569 |
| dataset_size: 112566261 |
| - config_name: cohort_with_triage |
| features: |
| - name: subject_id |
| dtype: int64 |
| - name: ed_stay_id |
| dtype: int64 |
| - name: hadm_id |
| dtype: float64 |
| - name: ed_intime |
| dtype: large_string |
| - name: ed_outtime |
| dtype: large_string |
| - name: disposition |
| dtype: large_string |
| - name: race |
| dtype: large_string |
| - name: arrival_transport |
| dtype: large_string |
| - name: first_careunit |
| dtype: large_string |
| - name: first_icu_intime |
| dtype: large_string |
| - name: cohort_label |
| dtype: large_string |
| - name: gender |
| dtype: large_string |
| - name: anchor_age |
| dtype: int64 |
| - name: anchor_year |
| dtype: int64 |
| - name: age_at_visit |
| dtype: int64 |
| - name: dod |
| dtype: large_string |
| - name: admittime |
| dtype: large_string |
| - name: dischtime |
| dtype: large_string |
| - name: admission_type |
| dtype: large_string |
| - name: discharge_location |
| dtype: large_string |
| - name: insurance |
| dtype: large_string |
| - name: language |
| dtype: large_string |
| - name: marital_status |
| dtype: large_string |
| - name: ed_stay_id_2 |
| dtype: float64 |
| - name: stay_window_start |
| dtype: large_string |
| - name: stay_window_end |
| dtype: large_string |
| - name: ed_boarding_time_hrs |
| dtype: float64 |
| - name: temperature |
| dtype: float64 |
| - name: heartrate |
| dtype: float64 |
| - name: resprate |
| dtype: float64 |
| - name: o2sat |
| dtype: float64 |
| - name: sbp |
| dtype: float64 |
| - name: dbp |
| dtype: float64 |
| - name: pain |
| dtype: large_string |
| - name: acuity |
| dtype: float64 |
| - name: chiefcomplaint |
| dtype: large_string |
| splits: |
| - name: with_triage |
| num_bytes: 188206416 |
| num_examples: 397675 |
| download_size: 33043596 |
| dataset_size: 188206416 |
| - config_name: ecg |
| features: |
| - name: ed_stay_id |
| dtype: int64 |
| - name: subject_id |
| dtype: int64 |
| - name: study_id |
| dtype: int64 |
| - name: ecg_time |
| dtype: large_string |
| - name: machine_report |
| dtype: large_string |
| splits: |
| - name: ecg |
| num_bytes: 35781132 |
| num_examples: 247083 |
| download_size: 10387666 |
| dataset_size: 35781132 |
| - config_name: ed_only_meds |
| features: |
| - name: subject_id |
| dtype: int64 |
| - name: stay_id |
| dtype: int64 |
| - name: hadm_id |
| dtype: float64 |
| - name: disposition |
| dtype: large_string |
| - name: charttime |
| dtype: large_string |
| - name: med_rn |
| dtype: int64 |
| - name: medication |
| dtype: large_string |
| - name: in_er |
| dtype: bool |
| splits: |
| - name: ed_only |
| num_bytes: 33616142 |
| num_examples: 337245 |
| download_size: 5136847 |
| dataset_size: 33616142 |
| - config_name: height |
| features: |
| - name: subject_id |
| dtype: int64 |
| - name: chartdate |
| dtype: large_string |
| - name: result_name |
| dtype: large_string |
| - name: result_value |
| dtype: float64 |
| - name: __index_level_0__ |
| dtype: int64 |
| splits: |
| - name: height |
| num_bytes: 36955070 |
| num_examples: 656979 |
| download_size: 6808537 |
| dataset_size: 36955070 |
| - config_name: labs_base |
| features: |
| - name: ed_stay_id |
| dtype: int64 |
| - name: subject_id |
| dtype: int64 |
| - name: hadm_id |
| dtype: int64 |
| - name: labevent_id |
| dtype: int64 |
| - name: itemid |
| dtype: int64 |
| - name: label |
| dtype: large_string |
| - name: fluid |
| dtype: large_string |
| - name: category |
| dtype: large_string |
| - name: order_time |
| dtype: timestamp[us] |
| - name: result_time |
| dtype: timestamp[us] |
| - name: flag |
| dtype: large_string |
| - name: ordered_location |
| dtype: large_string |
| - name: result_after_icu_transfer |
| dtype: bool |
| splits: |
| - name: train |
| num_bytes: 3940226140 |
| num_examples: 31072620 |
| download_size: 322368258 |
| dataset_size: 3940226140 |
| - config_name: medrecon |
| features: |
| - name: ed_stay_id |
| dtype: int64 |
| - name: subject_id |
| dtype: int64 |
| - name: charttime |
| dtype: large_string |
| - name: name |
| dtype: large_string |
| - name: gsn |
| dtype: int64 |
| - name: ndc |
| dtype: int64 |
| - name: etccode |
| dtype: float64 |
| - name: etcdescription |
| dtype: large_string |
| splits: |
| - name: medrecon |
| num_bytes: 400531544 |
| num_examples: 2869159 |
| download_size: 36681696 |
| dataset_size: 400531544 |
| - config_name: meds_admitted |
| features: |
| - name: subject_id |
| dtype: int64 |
| - name: stay_id |
| dtype: int64 |
| - name: hadm_id |
| dtype: float64 |
| - name: pyxis_charttime |
| dtype: large_string |
| - name: pyxis_med_rn |
| dtype: float64 |
| - name: pyxis_medication |
| dtype: large_string |
| - name: emar_id |
| dtype: large_string |
| - name: emar_charttime |
| dtype: large_string |
| - name: emar_medication |
| dtype: large_string |
| - name: event_txt |
| dtype: large_string |
| - name: scheduletime |
| dtype: large_string |
| - name: in_er |
| dtype: bool |
| splits: |
| - name: meds_admit |
| num_bytes: 1508729053 |
| num_examples: 8771619 |
| download_size: 135945142 |
| dataset_size: 1508729053 |
| - config_name: microbiology_events |
| features: |
| - name: subject_id |
| dtype: int64 |
| - name: hadm_id |
| dtype: int64 |
| - name: ed_stay_id |
| dtype: int64 |
| - name: microevent_id |
| dtype: int64 |
| - name: micro_specimen_id |
| dtype: int64 |
| - name: charttime |
| dtype: timestamp[us] |
| - name: spec_itemid |
| dtype: int64 |
| - name: spec_type_desc |
| dtype: large_string |
| - name: test_itemid |
| dtype: int64 |
| - name: test_name |
| dtype: large_string |
| - name: org_name |
| dtype: large_string |
| - name: comments |
| dtype: large_string |
| - name: storetime |
| dtype: timestamp[us] |
| - name: result_available_in_er |
| dtype: int64 |
| - name: disposition |
| dtype: large_string |
| - name: cohort_label |
| dtype: large_string |
| splits: |
| - name: microbiology_events |
| num_bytes: 184746779 |
| num_examples: 842611 |
| download_size: 22865375 |
| dataset_size: 184746779 |
| - config_name: radiology_details |
| features: |
| - name: ed_stay_id |
| dtype: int64 |
| - name: subject_id |
| dtype: int64 |
| - name: hadm_id |
| dtype: float64 |
| - name: note_id |
| dtype: large_string |
| - name: charttime |
| dtype: large_string |
| - name: exam_name |
| dtype: large_string |
| - name: cpt_code |
| dtype: float64 |
| - name: report_text |
| dtype: large_string |
| splits: |
| - name: radiology_details |
| num_bytes: 794392906 |
| num_examples: 576542 |
| download_size: 350549252 |
| dataset_size: 794392906 |
| - config_name: triage |
| features: |
| - name: ed_stay_id |
| dtype: int64 |
| - name: subject_id |
| dtype: int64 |
| - name: temperature |
| dtype: decimal128(12, 9) |
| - name: heartrate |
| dtype: decimal128(13, 9) |
| - name: resprate |
| dtype: decimal128(13, 9) |
| - name: o2sat |
| dtype: decimal128(13, 9) |
| - name: sbp |
| dtype: decimal128(15, 9) |
| - name: dbp |
| dtype: decimal128(15, 9) |
| - name: pain |
| dtype: large_string |
| - name: acuity |
| dtype: decimal128(10, 9) |
| - name: chiefcomplaint |
| dtype: large_string |
| splits: |
| - name: triage |
| num_bytes: 64267748 |
| num_examples: 399573 |
| download_size: 9120401 |
| dataset_size: 64267748 |
| - config_name: vitals |
| features: |
| - name: ed_stay_id |
| dtype: int64 |
| - name: subject_id |
| dtype: int64 |
| - name: charttime |
| dtype: large_string |
| - name: temperature |
| dtype: float64 |
| - name: heartrate |
| dtype: float64 |
| - name: resprate |
| dtype: float64 |
| - name: o2sat |
| dtype: float64 |
| - name: sbp |
| dtype: float64 |
| - name: dbp |
| dtype: float64 |
| - name: rhythm |
| dtype: large_string |
| - name: pain |
| dtype: large_string |
| splits: |
| - name: vitals |
| num_bytes: 163957292 |
| num_examples: 1496038 |
| download_size: 28493237 |
| dataset_size: 163957292 |
| - config_name: weight |
| features: |
| - name: subject_id |
| dtype: int64 |
| - name: chartdate |
| dtype: large_string |
| - name: result_name |
| dtype: large_string |
| - name: result_value |
| dtype: float64 |
| - name: __index_level_0__ |
| dtype: int64 |
| splits: |
| - name: weight |
| num_bytes: 92656744 |
| num_examples: 1647231 |
| download_size: 16255986 |
| dataset_size: 92656744 |
| --- |
| |
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| ## weight |
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| Height and weight measurement records from hosp.omr for cohort patients — separated to take single measurements of height as an average of all available height measurements for a patient and retaining all separate weight measurements. Duplicates were dropped Used to supplement ED and inpatient state features with recent baseline measurements. |
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| **License:** PhysioNet Credentialed Health Data License 1.5.0 — https://physionet.org/content/mimiciv/view-license/3.1/ |
|
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| ## cohort_full |
| |
| Processed ED patient cohort derived from MIMIC-IV. One row per ED visit (ed_stay_id). Built from cohort_base (BigQuery) with the following post-processing steps: (1) AGAINST ADVICE discharge_location records removed — patient-driven departures are out of scope. (2) Consecutive ED visits sharing a hadm_id collapsed into single rows; second ed_stay_id stored in ed_stay_id_2. (3) stay_window_start/stay_window_end columns added covering ED arrival to final discharge. (4) ed_boarding_time_hrs added: hours in ED after admission decision (null for ED-only patients). Intended as the primary cohort table for feature engineering and RL state construction. |
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| **License:** PhysioNet Credentialed Health Data License 1.5.0 — https://physionet.org/content/mimiciv/view-license/3.1/ |
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