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metadata
dataset_info:
  features:
    - name: compound_id
      dtype: string
    - name: smiles_input
      dtype: string
    - name: smiles_standardized
      dtype: string
    - name: source
      dtype: string
    - name: provenance
      dtype: string
    - name: passed_mpo_filter
      dtype: bool
    - name: mw
      dtype: float64
    - name: logp
      dtype: float64
    - name: tpsa
      dtype: float64
    - name: hbd
      dtype: float64
    - name: hba
      dtype: float64
    - name: heavy_atoms
      dtype: float64
    - name: fsp3
      dtype: float64
    - name: pka_representative
      dtype: float64
    - name: cns_mpo_score
      dtype: float64
    - name: p_bbb
      dtype: float64
    - name: score_total
      dtype: float64
  splits:
    - name: train
      num_examples: 924220136
  dataset_size: 126000000000
license: cc-by-nc-4.0
task_categories:
  - tabular-classification
tags:
  - chemistry
  - drug-discovery
  - blood-brain-barrier
  - bbb
  - cns
  - molecular-properties
  - screening
pretty_name: 'BBB-Nuke: 924M Compound BBB Permeability Screen'
size_categories:
  - 1B<n<10B

BBB-Nuke: 924M Compound Blood-Brain Barrier Permeability Screen

Overview

924 million small molecules screened for blood-brain barrier (BBB) permeability using the BBB-Nuke pipeline.

Data Sources

Source Files Compounds
Enamine REAL 2,000 ~199M
Existing (ZINC/ChEMBL) 7,384 ~666M
PubChem 625 ~59M
Total 10,009 924,220,136

Key Columns

    • Canonical SMILES
    • BBB permeability probability (0-1)
    • CNS multi-parameter optimization score
  • , , - Key physicochemical descriptors
    • Predicted pKa
    • Data source (enamine_real, existing, pubchem)

Compute

Screened on Azure ML using 8x NVIDIA A100 80GB GPUs (Standard_ND96amsr_A100_v4).

Citation

If you use this dataset, please cite the ATTN-Lab BBB-Nuke project.

License

CC BY-NC 4.0