repo stringlengths 2 99 | file stringlengths 13 225 | code stringlengths 0 18.3M | file_length int64 0 18.3M | avg_line_length float64 0 1.36M | max_line_length int64 0 4.26M | extension_type stringclasses 1
value |
|---|---|---|---|---|---|---|
amuse | amuse-main/src/amuse/io/store_v1.py | try:
import h5py
except ImportError as ex:
import warnings
warnings.warn("could not load h5py, hdf5 files not supported", ImportWarning)
h5py = None
import numpy
import pickle
import os.path
import sys
from amuse.units import si
from amuse.units import units
from amuse.units import core
from amuse... | 32,086 | 36.749412 | 143 | py |
amuse | amuse-main/src/amuse/io/nemobin.py | import array
import numpy
from amuse.io import base
from amuse.units import nbody_system
from amuse.support.core import late, OrderedMultiDictionary
from amuse import datamodel
class NemoItemType(type):
mapping = {}
def __new__(metaclass, name, bases, dict):
if 'datatype' in dict:
if no... | 12,272 | 28.014184 | 139 | py |
amuse | amuse-main/src/amuse/io/store_v2.py | try:
import h5py
except ImportError as ex:
import warnings
warnings.warn("could not load h5py, hdf5 files not supported", ImportWarning)
h5py = None
import numpy
import pickle
import os.path
import sys
from amuse.units import si
from amuse.units import units
from amuse.units import core
from amuse... | 46,982 | 35.762911 | 147 | py |
amuse | amuse-main/src/amuse/io/vtk.py | from amuse.support.core import late
from amuse.io import base
from amuse.units import units
from amuse.units import quantities
import numpy
from amuse import datamodel
class VtkStructuredGrid(base.FileFormatProcessor):
"""
Process a text file containing a table of values separated by a predefined character
... | 14,998 | 34.458629 | 130 | py |
amuse | amuse-main/src/amuse/io/gadget.py | import struct
import numpy
from collections import namedtuple
from amuse.io import base
from amuse.units import units
from amuse.units import nbody_system
from amuse.support.core import late
from amuse import datamodel
class GadgetFileFormatProcessor(base.FortranFileFormatProcessor):
"""
Process a Gadget bi... | 16,756 | 33.479424 | 120 | py |
amuse | amuse-main/src/amuse/io/starlab.py | import sys
import xml.dom.minidom
import pdb #use with pdb.set_trace()
import re
from amuse.io import base
from amuse.units import units
from amuse.units import nbody_system
from amuse.units import generic_unit_converter
from amuse import datamodel
starlab_stellar_types_to_amuse_stellar_type = {
"planet":units.s... | 17,938 | 38.600442 | 155 | py |
amuse | amuse-main/src/amuse/io/text.py | import numpy
from amuse.support.core import late
from amuse.io import base
from amuse.units import units
from amuse.units import core
from amuse.units.quantities import is_quantity
import re
from amuse import datamodel
class LineBasedFileCursor(object):
def __init__(self, file):
self._line = None
... | 22,593 | 33.129909 | 167 | py |
amuse | amuse-main/src/amuse/io/__init__.py | """
File input and output
AMUSE can read and write to/from several data formats. The main routines
are write_set_to_file and read_set_from_file, explained below.
"""
from amuse.io.base import *
from amuse.io import text
from amuse.io.nemotsf import NemoFileFormatProcessor
from amuse.io.nemobin import NemoBinaryFileFo... | 1,001 | 31.322581 | 79 | py |
amuse | amuse-main/src/amuse/io/store.py |
import numpy
import pickle
import os.path
from amuse.io import base
from amuse.units import si
from amuse.units import units
from amuse.units import core
from amuse.units.quantities import is_quantity
from amuse.support import exceptions
from amuse.datamodel import Particles
from amuse.datamodel import AttributeStor... | 6,419 | 32.968254 | 112 | py |
amuse | amuse-main/src/amuse/io/nemotsf.py | import re
import numpy
from amuse.io import base
from amuse.units import units
from amuse.units import nbody_system
from amuse import datamodel
TEMPLATE = \
"""set SnapShot
set Parameters
int Nobj {0.number_of_particles:d}
double Time {0.time:e}
tes
set Particles
int CoordSystem {0.coordinate_system_... | 5,389 | 34.933333 | 122 | py |
amuse | amuse-main/src/amuse/io/horizons.py | from datetime import date, timedelta
class LoadStar(object):
def __init__(self, planet):
f = open('../viewer/'+planet+'.txt','r')
M = f.readlines()
f.close()
"""
radiusline = M[4]
radius = float(radiusline.split('=')[1].split('(')[0])
massline = M[5]
... | 2,608 | 28.314607 | 87 | py |
amuse | amuse-main/src/amuse/ic/plummer.py | """
Plummer model generator
This module contains a function used to create Plummer (1911) models, which
follow a spherically symmetric density profile of the form:
rho = c * (1 + r**2)**(-5/2)
"""
import numpy
import numpy.random
from math import pi, sqrt
from amuse.units import nbody_system
from amuse import data... | 6,918 | 46.390411 | 132 | py |
amuse | amuse-main/src/amuse/ic/salpeter.py | """
Salpeter (1955) initial mass function (IMF)
This module contains functions used to generate realisations of the
Salpeter IMF.
"""
import numpy
import os
import sys
from amuse.units import nbody_system
from amuse.units import units
__all__ = ["new_salpeter_mass_distribution", "new_salpeter_mass_distribution_nbo... | 2,981 | 36.746835 | 116 | py |
amuse | amuse-main/src/amuse/ic/kroupa.py | """
Kroupa (2001) initial mass function (IMF)
This module contains a function used to generate realisations of the Kroupa
(2001) initial mass function (IMF).
"""
from amuse.ic.brokenimf import new_kroupa_mass_distribution
__all__ = ["new_kroupa_mass_distribution"]
| 267 | 28.777778 | 76 | py |
amuse | amuse-main/src/amuse/ic/solarsystem.py | """
Generate the Solar system at a specified Julian date (default: 2438871.5).
"""
from amuse.ext.solarsystem import new_solar_system_for_mercury, new_solar_system
| 165 | 26.666667 | 80 | py |
amuse | amuse-main/src/amuse/ic/gasplummer.py | """
Plummer gas model generator
This module contains a function used to create Plummer (1911) models consisting
of (SPH) gas particles.
Plummer models follow a spherically symmetric density profile of the form:
rho = c * (1 + r**2)**(-5/2)
"""
import numpy
from amuse.ext.evrard_test import uniform_unit_sphere
from ... | 3,678 | 38.55914 | 120 | py |
amuse | amuse-main/src/amuse/ic/solar_system_moons.py | import numpy
from amuse.units import units, nbody_system, constants
from amuse.datamodel import Particles, Particle
from amuse.community.kepler.interface import Kepler
from amuse.ext.solarsystem import solar_system_in_time
#mass in units of 10^16kg
_lunar_data = [
["Earth", "Moon", 7.34767309e+6, 1.737, ... | 21,531 | 65.869565 | 127 | py |
amuse | amuse-main/src/amuse/ic/flatimf.py | """
Flat initial mass function (IMF)
This module contains functions used to generate realisations of a
logarithmically flat IMF.
"""
import numpy
from amuse.units import units, nbody_system
__all__ = ["new_flat_mass_distribution", "new_flat_mass_distribution_nbody"]
class FlatIMF(object):
def __init__(self, ma... | 2,352 | 36.951613 | 90 | py |
amuse | amuse-main/src/amuse/ic/molecular_cloud.py | """
Generate a molecular cloud of SPH particles
"""
from amuse.ext.molecular_cloud import molecular_cloud
def new_molecular_cloud(
nf=32, power=-3., targetN=10000, ethep_ratio=0.01,
convert_nbody=None, ekep_ratio=1., seed=None, base_grid=None,
):
return molecular_cloud(
nf=nf, power=power, targetN... | 468 | 28.3125 | 70 | py |
amuse | amuse-main/src/amuse/ic/fractalcluster.py | from amuse.community.fractalcluster.interface import MakeFractalCluster
from amuse.community.fractalcluster.interface import new_fractal_cluster_model
| 151 | 49.666667 | 78 | py |
amuse | amuse-main/src/amuse/ic/limepy.py | from amuse.support.exceptions import AmuseWarning
from amuse.datamodel import Particles, ParticlesWithUnitsConverted
from amuse.units import nbody_system
from amuse.community import LiteratureReferencesMixIn
try:
from ._limepy import limepy, sample
scipy_imported = True
except ImportError:
raise
scipy_... | 1,724 | 25.953125 | 70 | py |
amuse | amuse-main/src/amuse/ic/millerscalo.py | """
Miller & Scalo (1979) initial mass function (IMF)
This module contains a function used to generate realisations of the
Miller & Scalo (1979) initial mass function (IMF).
"""
from amuse.ic.brokenimf import new_miller_scalo_mass_distribution
__all__ = ["new_miller_scalo_mass_distribution"]
| 295 | 31.888889 | 69 | py |
amuse | amuse-main/src/amuse/ic/__init__.py | """
Initial Conditions
This module contains a number of packages with routines to generate initial conditions:
Initial stellar mass generators:
brokenimf - realisations of multiple-part power-law IMFs
flatimf - logarithmically flat IMF
kroupa - Kroupa (2001) initial mass funct... | 1,229 | 42.928571 | 97 | py |
amuse | amuse-main/src/amuse/ic/brokenimf.py | """
Broken power-law initial mass function (IMF)
This module contains functions used to generate realisations of multiple-part
power-law IMFs such as Kroupa (2001), Scalo (1986), Miller & Scalo (1979).
"""
import numpy
import numpy.random
from amuse.support import exceptions
from amuse.units import units
from amuse.... | 9,136 | 33.093284 | 93 | py |
amuse | amuse-main/src/amuse/ic/make_planets_oligarch.py | """
Make planets based on the an assumption of oligarchical planetary growth.
(the formalism of Kokubo & Ida (1998))
After:
@article{0004-637X-807-2-157,
author={Scott Tremaine},
title={The Statistical Mechanics of Planet Orbits},
journal={The Astrophysical Journal},
volume={807},
number={2},
pages={157},
url=... | 13,570 | 38.797654 | 1,350 | py |
amuse | amuse-main/src/amuse/ic/mameclot.py | from amuse.community.mameclot.interface import mameclot
| 56 | 27.5 | 55 | py |
amuse | amuse-main/src/amuse/ic/isotropic_cloud.py | """
Spherical isotropic (Oort) cloud -- initial conditions for a particle set
See for example:
* Duncan, M.; Quinn, T.; Tremaine, S. -- http://adsabs.harvard.edu/abs/1987AJ.....94.1330D
* Feng, F.; Bailer-Jones, C. A. L. -- http://adsabs.harvard.edu/abs/2014MNRAS.442.3653F
* Dybczynski, P. A. -- http://adsabs.ha... | 7,649 | 39.263158 | 113 | py |
amuse | amuse-main/src/amuse/ic/scalo.py | """
Scalo (1986) initial mass function (IMF)
This module contains a function used to generate realisations of the Scalo (1986)
initial mass function (IMF).
"""
from amuse.ic.brokenimf import new_scalo_mass_distribution
__all__ = ["new_scalo_mass_distribution"]
| 263 | 28.333333 | 82 | py |
amuse | amuse-main/src/amuse/ic/kingmodel.py | """
King (1966) model generator
This module contains a function used to create King models.
"""
import math
import numpy
from amuse.support import exceptions
from amuse.units import nbody_system
from amuse import datamodel
__all__ = ["new_king_model"]
class MakeKingModel(object):
def __init__(self, number_of_p... | 20,594 | 39.944334 | 120 | py |
amuse | amuse-main/src/amuse/ic/_limepy/sample.py | # -*- coding: utf-8 -*-
from __future__ import division
import numpy
import scipy
from numpy import exp, sqrt, pi, sin, cos
from scipy.special import gammainc, dawsn, erfi
from scipy import random
from scipy import optimize
from math import factorial
class sample:
def __init__(self, mod, **kwargs):
r""""
... | 10,121 | 32.186885 | 128 | py |
amuse | amuse-main/src/amuse/ic/_limepy/limepy.py | # -*- coding: utf-8 -*-
import numpy
import scipy
from scipy.interpolate import BPoly, interp1d, UnivariateSpline
from numpy import exp, sqrt, pi, sin, cos, log10
from scipy.special import gamma, gammainc, hyp1f1
from scipy.integrate import ode, simps, quad
from math import factorial, sinh
# Authors: Mark Gieles,... | 43,751 | 37.856128 | 114 | py |
amuse | amuse-main/src/amuse/ic/_limepy/__init__.py | # -*- coding: utf-8 -*-
__author__ = 'Mark Gieles, Alice Zocchi'
__email__ = 'm.gieles@surrey.ac.uk, a.zocchi@surrey.ac.uk'
__version__ = '0.1.1'
from .limepy import limepy
from .sample import sample
| 204 | 17.636364 | 58 | py |
amuse | amuse-main/src/amuse/plot/mapper.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Make 2D maps from SPH particles using FiMap
"""
import logging
import numpy
from amuse.units import units, constants, nbody_system
from amuse.datamodel.rotation import new_rotation_matrix, rotate
from amuse.community.fi import FiMap
def gas_mean_molecular_weight(
... | 12,634 | 26.527233 | 79 | py |
amuse | amuse-main/src/amuse/plot/__init__.py | from ._plot import *
| 21 | 10 | 20 | py |
amuse | amuse-main/src/amuse/plot/hydro.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Plot hydro and/or stars
"""
import os
import sys
import logging
import numpy
import copy
import argparse
import matplotlib
import matplotlib.pyplot as plt
# import matplotlib.cm as cm
from amuse.datamodel import Particles
from amuse.io import read_set_from_file
from ... | 13,863 | 24.674074 | 75 | py |
amuse | amuse-main/src/amuse/plot/_plot.py | try:
import matplotlib.pyplot as native_plot
from mpl_toolkits.mplot3d import Axes3D
except ImportError:
class FakePlotLibrary(object):
def stub(self, *args, **kwargs):
raise Exception("No plot library available")
def __getattr__(self, name):
raise Exception(... | 22,278 | 35.463175 | 117 | py |
amuse | amuse-main/src/amuse/test/amusetest.py | import unittest
import numpy
import os
import sys
import inspect
import tempfile
from amuse.support import _Defaults
from amuse.support import exceptions
from amuse.support import literature
from amuse.support import options
from amuse.support.core import late
from amuse.support import get_amuse_root_dir
from amuse.... | 12,939 | 36.947214 | 142 | py |
amuse | amuse-main/src/amuse/test/compile_tools.py | import os
import subprocess
import time
import shlex
import numpy
import shutil
from amuse.rfi.tools import create_java
from amuse.rfi.tools import create_c
from amuse.rfi.tools import create_fortran
from amuse.rfi.core import config
from amuse.test.amusetest import get_amuse_root_dir
def get_mpicc_name():
try:
... | 14,500 | 28.593878 | 149 | py |
amuse | amuse-main/src/amuse/test/__init__.py | 0 | 0 | 0 | py | |
amuse | amuse-main/src/amuse/test/suite/__init__.py | 0 | 0 | 0 | py | |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_kepler.py | import os
import sys
import time
from amuse.test.amusetest import TestWithMPI
import numpy
import math
from amuse.units import nbody_system
from amuse.units import units, constants
from amuse import datamodel
from amuse.ic.plummer import new_plummer_model
from amuse.community.kepler_orbiters.interface import Kepler
... | 2,456 | 32.202703 | 86 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_phantom.py | from amuse.test.amusetest import TestWithMPI
import os
import sys
import numpy
import math
from amuse.community.phantom.interface import PhantomInterface, Phantom
from amuse.datamodel import Particles
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse.ic import p... | 4,583 | 31.510638 | 76 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_create_dir.py | from amuse.test import amusetest
import os.path
import shutil
import subprocess
import sys
from amuse.rfi.tools import create_dir
class CreateADirectoryAndPopulateItWithFilesForACommunityCodeTest(amusetest.TestWithMPI):
def setUp(self):
self.check_can_compile_modules()
def test1(self):
ins... | 4,881 | 29.898734 | 97 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_encounters.py | from amuse.test import amusetest
from amuse.units import units
from amuse.units import constants
from amuse.units import nbody_system
import numpy
import time
import sys
from amuse.datamodel import Particles
from amuse.datamodel import Particle
from amuse.couple import encounters
# codes to use
from amuse.community... | 56,710 | 42.224848 | 119 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_galactics.py | import os
import os.path
import numpy
import platform
from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.community.galactics.interface import GalactICsInterface, GalactICs
# Change the default for some GalactICs(-Interface) keyword arguments:
default_options = dict()
# default_optio... | 19,410 | 52.473829 | 135 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_galaxia.py | from amuse.test import amusetest
from amuse.units import units, nbody_system, constants
from amuse.community.galaxia.interface import BarAndSpirals3D
class TestBarAndSpirals3D(amusetest.TestCase):
def test1(self):
galaxy = BarAndSpirals3D()
self.assertEqual(galaxy.model_time, 0. | units.yr)
... | 634 | 34.277778 | 81 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_bonsai2.py | from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.community.bonsai2.interface import Bonsai2Interface, Bonsai2
import numpy
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse.rfi import channel
from amuse.ic.plummer import new... | 13,384 | 48.94403 | 172 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_gravity_codes.py | from amuse.test.amusetest import TestWithMPI
from amuse.community.bhtree.interface import BHTree
from amuse.community.hermite.interface import Hermite
from amuse.community.phigrape.interface import PhiGRAPE
from amuse.community.gadget2.interface import Gadget2
from amuse.community.fi.interface import Fi
from amuse.com... | 13,092 | 38.318318 | 118 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_parameter_doc.py | import os
import sys
from amuse.test import amusetest
from amuse.community.bhtree.interface import BHTreeInterface, BHTree
from amuse.community.hermite.interface import HermiteInterface, Hermite
from amuse.community.phigrape.interface import PhiGRAPEInterface, PhiGRAPE
from amuse.units import nbody_system
from amuse.u... | 2,630 | 38.863636 | 114 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_fi.py | import os
import sys
import numpy
import time
from amuse.test.amusetest import TestWithMPI
from amuse.community.fi.interface import FiInterface, Fi
from amuse.ext.evrard_test import new_evrard_gas_sphere, MakeEvrardTest
from amuse.ext.spherical_model import new_uniform_spherical_particle_distribution
from amuse.units ... | 81,088 | 46.755595 | 192 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_sphray.py | import os.path
import numpy
from amuse.test.amusetest import TestWithMPI
from amuse.community.sphray.interface import SPHRayInterface, SPHRay
from amuse.units import units
from amuse.datamodel import Particles, create_particle_set
from amuse.datamodel import Particle
from amuse.io import read_set_from_file
# default... | 25,081 | 43.314488 | 126 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_octgrav.py | import os
import sys
import numpy
from amuse.community.octgrav.interface import OctgravInterface, Octgrav
from amuse.test.amusetest import TestWithMPI
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse.rfi import channel
from amuse.ic.plummer import *
class Tes... | 8,451 | 38.867925 | 117 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_capreole.py | import os
import sys
import numpy
from amuse.test.amusetest import TestWithMPI
from amuse.community.capreole.interface import CapreoleInterface
from amuse.community.capreole.interface import Capreole
from amuse.units import generic_unit_system
from amuse.units import generic_unit_converter
from amuse.units import uni... | 77,532 | 42.655968 | 181 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_tupan.py | import numpy
import math
from amuse.test.amusetest import TestWithMPI
from amuse.units import nbody_system, units, constants
from amuse.datamodel import Particles
from amuse.ic.plummer import new_plummer_model
try:
from amuse.community.tupan.interface import TupanInterface, Tupan, MODULES_MISSING
except ImportErr... | 26,869 | 48.212454 | 114 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_interface.py |
from amuse.test.amusetest import TestWithMPI
from amuse.community.interface import gd
from amuse.community.interface.gd import GravitationalDynamicsInterface
from amuse.rfi.tools import create_definition
from amuse.rfi.tools.create_definition import CodeDocStringProperty
from amuse.rfi.core import LegacyFunctionSpeci... | 4,738 | 40.938053 | 111 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mesa_15140.py | from amuse.test.amusetest import TestWithMPI, get_path_to_results
import sys
import os.path
from subprocess import PIPE, Popen
import numpy
from amuse.community.mesa_r15140.interface import MESA, MESAInterface
from amuse.support.exceptions import AmuseException
from amuse.units import units
from amuse.datamodel impor... | 57,659 | 40.782609 | 101 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_phigrape.py | import os
import sys
import time
from amuse.community.phigrape.interface import PhiGRAPEInterface, PhiGRAPE
from amuse.test.amusetest import TestWithMPI
import numpy
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse.ic.plummer import new_plummer_model
try:
i... | 34,411 | 41.483951 | 209 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_smalln.py | from amuse.test.amusetest import TestWithMPI
import os
import sys
import numpy
import math
from amuse.community.smalln.interface import SmallNInterface, SmallN
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse import io
from amuse.datamodel import trees
from amu... | 22,713 | 37.368243 | 115 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_bridge.py | import numpy
from amuse.test.amusetest import TestWithMPI
from amuse.community.fi.interface import Fi
from amuse.community.hermite.interface import Hermite
from amuse.community.phigrape.interface import PhiGRAPE
from amuse.community.bhtree.interface import BHTree
from amuse.ext.bridge import bridge
from amuse.units im... | 2,107 | 34.728814 | 81 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/legacy_support.py | 0 | 0 | 0 | py | |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_hacs64.py | from amuse.test.amusetest import TestWithMPI
import os
import sys
import numpy
import math
from amuse.community.hacs64.interface import Hacs64Interface, Hacs64
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse.ic import plummer
try:
from matplotlib import py... | 30,640 | 42.648148 | 126 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mmams.py | import os.path
import itertools
import pickle
import numpy
from math import pi
from amuse.test.amusetest import get_path_to_results, TestWithMPI
from amuse.support.exceptions import AmuseException, CodeException
from amuse.community.mesa.interface import MESA
from amuse.community.evtwin.interface import EVtwin
from amu... | 60,154 | 50.022053 | 175 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_bonsai.py | from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.community.bonsai.interface import BonsaiInterface, Bonsai
import os
import sys
import numpy
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse.rfi import channel
from amuse.ic.... | 13,098 | 48.806084 | 184 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mi6.py | import numpy
import math
from amuse.test.amusetest import TestWithMPI
from amuse.units import nbody_system, units, constants
from amuse.datamodel import Particles
from amuse.community.mi6.interface import MI6Interface, MI6
from amuse.ic.plummer import new_plummer_model
default_options = dict()
class TestMI6Interf... | 30,287 | 48.168831 | 125 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_parallel.py | from amuse.test.amusetest import TestWithMPI
import os
import sys
from amuse.community.hermite.interface import Hermite
from amuse.community.bhtree.interface import BHTree
import numpy
import threading
from amuse.units import nbody_system
from amuse.units import units
from amuse.datamodel import Particles
try:
f... | 4,044 | 34.79646 | 108 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_aarsethzare.py | from amuse.test.amusetest import TestWithMPI
import os
import sys
import numpy
import math
from amuse.community.aarsethzare.interface import AarsethZareInterface, AarsethZare
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse.ic import plummer
try:
from matpl... | 6,044 | 34.145349 | 97 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_krome.py | import os.path
import numpy
from amuse.test.amusetest import TestWithMPI
from amuse.community.krome.interface import KromeInterface, Krome, solar_abundances
from amuse.units import units
from amuse.datamodel import Particles
from amuse.io import read_set_from_file
# default_options={}
default_options = dict(redirect... | 16,525 | 31.986028 | 91 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_nbody6xx.py | from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.community.nbody6xx.interface import Nbody6xxInterface
from amuse.community.nbody6xx.interface import Nbody6xx
import math
class Nbody6xxInterfaceTests(TestWithMPI):
def test1(self):
instance = Nbody6xxInterface()
... | 3,256 | 41.855263 | 109 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_petar.py | from amuse.test.amusetest import TestWithMPI
import numpy
from amuse.community.petar.interface import PetarInterface, Petar
from amuse.units import nbody_system
from amuse import datamodel
from amuse.ic import plummer
from amuse.ic.plummer import new_plummer_model
from .gd_tests import _TestGravitationalDynamicsInte... | 4,562 | 35.798387 | 79 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_multiples.py | from amuse.test.amusetest import TestWithMPI
import tempfile
import numpy
from amuse.community.hermite.interface import Hermite
from amuse.community.kepler.interface import Kepler
from amuse.community.smalln.interface import SmallN
from amuse.units import nbody_system
from amuse.units import units
from amuse.units i... | 43,150 | 41.5133 | 164 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_secularmultiple.py | from amuse.test.amusetest import TestWithMPI
import os
import sys
import numpy
import math
from amuse.community.secularmultiple.interface import SecularMultipleInterface, SecularMultiple
from amuse.units import units, quantities, constants
from amuse.datamodel import Particles
HAS_MATPLOTLIB = False # disable plott... | 24,111 | 34.880952 | 236 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mercury.py | import os
import sys
import numpy as np
from amuse.test.amusetest import TestWithMPI
from amuse.community.mercury.interface import MercuryInterface, MercuryWayWard, Mercury
from amuse.ext.solarsystem import new_solar_system_for_mercury, new_solar_system
from amuse.units import nbody_system
from amuse.units import unit... | 30,338 | 35.730024 | 113 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_evtwin.py | from amuse.test.amusetest import TestWithMPI, get_path_to_results
import sys
import os.path
from numpy import pi, arange
import numpy.random
from amuse.community.evtwin.interface import EVtwin, EVtwinInterface
from amuse.support.exceptions import AmuseException
from amuse.units import nbody_system, units
from amuse.u... | 47,749 | 43.212963 | 143 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_gadget2.py | import numpy
import os.path
from amuse.test.amusetest import TestWithMPI
from amuse.community.gadget2.interface import Gadget2Interface, Gadget2
from amuse.ext.evrard_test import MakeEvrardTest, new_evrard_gas_sphere, body_centered_grid_unit_cube
from amuse.ext.spherical_model import new_uniform_spherical_particle_dis... | 75,272 | 51.8974 | 152 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_athena.py | import os
import sys
import numpy
import math
from amuse.test.amusetest import TestWithMPI
from amuse.community.athena.interface import AthenaInterface, Athena
from amuse.units.quantities import VectorQuantity
from amuse.units import generic_unit_system
from amuse.units import units
from amuse.units import generic_uni... | 125,247 | 44.511628 | 227 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_bhtree.py |
# -*- coding: utf-8 -*-
from amuse.test.amusetest import TestWithMPI
import os
import sys
import numpy
import time
import math
from amuse.community.bhtree.interface import BHTreeInterface, BHTree
from amuse.support.exceptions import AmuseException
from amuse.units import constants
from amuse.units import nbody_system... | 39,059 | 41 | 156 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_particle_attributes.py | import random
import numpy.random
import sys
from amuse.test import amusetest
from amuse.units import units
from amuse.units import constants
from amuse.units import nbody_system
from amuse.support.interface import ConvertArgumentsException
from amuse.ic.plummer import new_plummer_sphere
from amuse.ic.salpeter import... | 8,517 | 56.945578 | 197 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_rebound.py | from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.community.rebound.interface import ReboundInterface
from amuse.community.rebound.interface import Rebound
import math
try:
from matplotlib import pyplot
HAS_MATPLOTLIB = True
except ImportError:
HAS_MATPLOTLIB = False
c... | 22,107 | 43.039841 | 137 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mocassin.py | import os
from amuse.test.amusetest import TestWithMPI
from amuse.units import units
from amuse import datamodel
from amuse.community.mocassin.interface import MocassinInterface, Mocassin, mocassin_rydberg_unit
import numpy
class TestMocassinInterface(TestWithMPI):
def test0(self):
instance = self.new_in... | 11,478 | 39.277193 | 122 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_simplex.py | import os.path
import numpy
from amuse.test.amusetest import TestWithMPI
from amuse.community.simplex.interface import SimpleXInterface, SimpleX, SimpleXSplitSet
from amuse.units import units
from amuse.datamodel import Particles
from amuse.datamodel import Particle
from amuse.ext.molecular_cloud import ism_cube
# de... | 23,585 | 41.883636 | 147 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/gd_tests.py | import numpy
from amuse.units import nbody_system
from amuse import datamodel
from amuse.ic.plummer import new_plummer_model
class _TestGravitationalDynamicsInterface:
def gravity_code_interface(self):
self.skip("abstract test")
def reference_includes(self):
self.skip("abstract test")
de... | 15,229 | 39.184697 | 104 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_higpus.py | import numpy
from amuse.test.amusetest import TestWithMPI
from amuse.units import nbody_system
from amuse.units import units
from amuse import datamodel
from amuse.community.higpus.interface import HiGPUsInterface, HiGPUs
from amuse.ic.plummer import new_plummer_model
class HiGPUsInterfaceTests(TestWithMPI):
de... | 17,967 | 39.196868 | 122 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_vader.py | import numpy as np
from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.units import units, constants
from amuse.community.vader.interface import VaderInterface, Vader
default_options = dict()
class TestVaderInterface(TestWithMPI):
def test1(self):
instance = self.new_... | 6,743 | 32.72 | 86 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mikkola.py | import numpy
from numpy import pi
from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.units import constants
from amuse.community.mikkola.interface import MikkolaInterface
from amuse.community.mikkola.interface import Mikkola
class MikkolaInterfaceTests(TestWithMPI):
def xtest0... | 31,202 | 38.749045 | 136 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_huayno.py | from amuse.test.amusetest import TestWithMPI
import os
import sys
import numpy
import math
from amuse.community.huayno.interface import HuaynoInterface, Huayno
from amuse.units import nbody_system
from amuse.units import units, constants
from amuse import datamodel
from amuse.ic import plummer
try:
from matplotli... | 36,345 | 41.559719 | 137 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/__init__.py | 0 | 0 | 0 | py | |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_pikachu.py | import math
import numpy
import os.path
from amuse.test.amusetest import TestWithMPI
from amuse.units import nbody_system, units, constants
from amuse.datamodel import Particles, Particle
from amuse.community.pikachu.interface import PikachuInterface, Pikachu
from amuse.ic.plummer import new_plummer_model
default_o... | 21,731 | 50.49763 | 120 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_fastkick.py | import numpy
import math
from amuse.units import nbody_system, units, constants, quantities
from amuse.datamodel import Particles, Particle
from amuse.ic.plummer import new_plummer_model
from amuse.couple.bridge import Bridge, CalculateFieldForCodesUsingReinitialize
from amuse.test.amusetest import TestWithMPI
from a... | 19,883 | 46.007092 | 126 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mobse.py | from amuse.community.mobse.interface import MOBSE, MOBSEInterface
from amuse.test.amusetest import TestWithMPI
from amuse.units import units
from amuse.units import constants
from amuse.datamodel import Particles
import numpy
class TestMOBSEInterface(TestWithMPI):
class state(object):
def __init__(self... | 29,891 | 40.401662 | 120 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_adaptb.py | import os
import os.path
import math
from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.units import units, nbody_system, constants
from amuse.datamodel import Particles
from amuse.community.adaptb.interface import AdaptbInterface, Adaptb
from amuse.community.adaptb.functions import... | 18,286 | 48.558266 | 130 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_lab.py | import os
import sys
import numpy
from numpy import random
from amuse.test import amusetest
from amuse.test.amusetest import get_path_to_results
from amuse import lab
class TestCodesInLab(amusetest.TestCase):
def test1(self):
codes = (
'SeBa',
'BHTree',
'Mocassin',
... | 597 | 19.62069 | 130 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_halogen.py | import os.path
import numpy
import subprocess
from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.community.halogen.interface import HalogenInterface, Halogen
import amuse.community.halogen
# Change the default for some Halogen(-Interface) keyword arguments:
default_options = dict()
#... | 18,974 | 48.934211 | 181 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_brutus.py | import os
import os.path
import math
from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse.units import units, nbody_system, constants
from amuse.datamodel import Particles
from amuse.community.brutus.interface import BrutusInterface, Brutus
import random
try:
import mpmath
H... | 17,660 | 42.07561 | 153 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_hop.py | import numpy
from numpy import random
from amuse.test.amusetest import get_path_to_results, TestCase
from amuse.units import units, nbody_system
from amuse.support.exceptions import AmuseException
from amuse.datamodel.particles import Particles
from amuse.ic.plummer import new_plummer_model
from amuse.community.hop.in... | 17,278 | 39.183721 | 197 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mpiamrvac.py | from amuse.community import *
from amuse.test.amusetest import TestWithMPI
from amuse import datamodel
from amuse.community.mpiamrvac.interface import MpiAmrVacInterface
from amuse.community.mpiamrvac.interface import MpiAmrVac
from amuse import io
from amuse.units import generic_unit_system
import os
import numpy
... | 44,902 | 44.083333 | 181 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_sse.py | import sys
import os
import os.path
import shutil
import numpy
from subprocess import call
from amuse.community.sse.interface import SSEInterface, SSE
from amuse.test.amusetest import get_path_to_results, TestWithMPI
from amuse import io
from amuse.units import units
from amuse.datamodel import Particle, Particles
fr... | 31,457 | 37.933168 | 121 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_seba.py | import numpy
from amuse.test.amusetest import TestWithMPI
from amuse.community.seba.interface import SeBaInterface, SeBa
from amuse.units import units
from amuse.units import constants
from amuse.datamodel import Particle
from amuse.datamodel import Particles
class TestSeBaInterface(TestWithMPI):
def test1(se... | 28,349 | 40.326531 | 142 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_mosse.py | import sys
import os
import os.path
import shutil
import numpy
from subprocess import call
from amuse.community.mosse.interface import MOSSEInterface, MOSSE
from amuse.test.amusetest import get_path_to_results, TestWithMPI
from amuse import io
from amuse.units import units
from amuse.datamodel import Particle, Partic... | 32,395 | 38.125604 | 118 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_ph4.py | import os
import sys
import time
from amuse.community.ph4.interface import ph4Interface, ph4
from amuse.test.amusetest import TestWithMPI
import numpy
import math
from amuse.units import nbody_system
from amuse.units import units, constants
from amuse import datamodel
from amuse.ic.plummer import new_plummer_model
tr... | 44,667 | 42.536062 | 156 | py |
amuse | amuse-main/src/amuse/test/suite/codes_tests/test_sakura.py | import numpy
import math
from amuse.test.amusetest import TestWithMPI
from amuse.units import nbody_system, units, constants
from amuse.datamodel import Particles
from amuse.ic.plummer import new_plummer_model
try:
from amuse.community.sakura.interface import SakuraInterface, Sakura, MODULES_MISSING
except Import... | 27,706 | 47.6942 | 114 | py |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.