| license: mit | |
| # Barkai Compendium | |
| This collects the ChEC-seq data from the following GEO series: | |
| - GSE179430 | |
| - GSE209631 | |
| - GSE222268 | |
| The metadata for each is parsed out from the SraRunTable, or in the case of GSE222268, the NCBI series matrix file | |
| (the genotype isn't in the SraRunTable) | |
| The [Barkai lab](https://barkailab.wixsite.com/barkai) refers to this set as their binding compendium. | |
| ## Dataset Details | |
| ### Data Structure |