Update README.md
Browse files
README.md
CHANGED
|
@@ -156,13 +156,12 @@ configs:
|
|
| 156 |
- name: padj
|
| 157 |
dtype: float64
|
| 158 |
description: Adjusted p-value for multiple testing for the gene
|
| 159 |
-
- config_name:
|
| 160 |
-
description:
|
| 161 |
dataset_type: annotated_features
|
| 162 |
-
default: true
|
| 163 |
data_files:
|
| 164 |
- split: train
|
| 165 |
-
path:
|
| 166 |
dataset_info:
|
| 167 |
features:
|
| 168 |
- name: regulator_locus_tag
|
|
@@ -218,6 +217,8 @@ This repo provides 4 datasets:
|
|
| 218 |
on GEO. See scripts/reprocessing_details.txt for more information.
|
| 219 |
- **yeastepigenome_annotatedfeatures**: ChIP-exo regulator-target binding features
|
| 220 |
with peak statistics.
|
|
|
|
|
|
|
| 221 |
|
| 222 |
## Usage
|
| 223 |
|
|
|
|
| 156 |
- name: padj
|
| 157 |
dtype: float64
|
| 158 |
description: Adjusted p-value for multiple testing for the gene
|
| 159 |
+
- config_name: reprocess_annotatedfeatures_tagcounts
|
| 160 |
+
description: Another version of the reprocessed data, quantified similarly to Calling Cards
|
| 161 |
dataset_type: annotated_features
|
|
|
|
| 162 |
data_files:
|
| 163 |
- split: train
|
| 164 |
+
path: reprocess_annotatedfeatures_tagcounts.parquet
|
| 165 |
dataset_info:
|
| 166 |
features:
|
| 167 |
- name: regulator_locus_tag
|
|
|
|
| 217 |
on GEO. See scripts/reprocessing_details.txt for more information.
|
| 218 |
- **yeastepigenome_annotatedfeatures**: ChIP-exo regulator-target binding features
|
| 219 |
with peak statistics.
|
| 220 |
+
- **reprocess_annotatedfeatures_tagcounts**: Reprocessed using a similar method to
|
| 221 |
+
the calling cards quantification
|
| 222 |
|
| 223 |
## Usage
|
| 224 |
|