metadata
license: cc-by-nc-4.0
tags:
- biology
- protein
- antibody
- VHH
configs:
- config_name: labelled
data_files: AVIDa-hTNFa.csv
default: true
- config_name: corpus
data_files: corpus-hTNFa.csv
AVIDa-hTNFa
AVIDa-hTNFa is an antigen-antibody interaction dataset produced from two alpacas immunized with human tumor necrosis factor alpha (TNFa) protein. This dataset includes labels indicating whether the VHH sequences are binders or non-binders to the wild type TNFa protein.
Columns
AVIDa-hTNFa.csv
| Column | Description |
|---|---|
| VHH_sequence | Amino acid sequence of VHH |
| Ag_label | Antigen Type |
| label | Binary label represented by 1 for the binding pair and 0 for the non-binding pair |
| subject_species | Species of the subject from which VHH was collected |
| subject_name | Name of the subject from which VHH was collected |
| subject_sex | Sex of the subject from which VHH was collected |
antigen_sequences.csv
| Column | Description |
|---|---|
| Ag_label | Antigen Type |
| Ag_sequence | Amino acid sequence of antigen |
corpus-hTNFa.csv
| Column | Description |
|---|---|
| VHH_sequence | Amino acid sequence of VHH |
| subject_species | Species of the subject from which VHH was collected |
| subject_name | Name of the subject from which VHH was collected |
| subject_sex | Sex of the subject from which VHH was collected |