task
stringclasses
5 values
input
stringlengths
89
339
functional_group
### Instruction: Does the molecule contain a amide group? CCCNC(=O)[C@@H]1N=NC2=C1C[C@H](C)CC2 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. C(=O)(/[NH+]=N\c1c(n(C)c2c1cc(C)cc2)O)N ### Response: Cc1ccc2c(c1)c(/N=[NH+]\C(N)=O)c(O)n2C
canonicalization
### Instruction: Canonicalize the following SMILES string. c1ccc(N([C@@H](CNC(c2oc3CCCC(=O)c3c2C)=O)C)C)cc1 ### Response: Cc1c(C(=O)NC[C@@H](C)N(C)c2ccccc2)oc2c1C(=O)CCC2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H]1CN(S(=O)(=O)[C@@H](C)c2cnccn2)CC[NH2+]1 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [9*]n1cc(C)cn1 Fragment 2: [1*]C(=O)c1ccc([16*])cc1 ### Response: Cc1cnn(-c2ccc(C(=O)OC3(C4CC4)CC3)cc2)c1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1ccc(NC(=O)C(=O)NCc2cc(Cl)c3c(c2)OCCO3)cc1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC[C@@H](NC(=O)c1cnn(-c2ccncc2)c1C)c1ccc(C)cc1 ### Response: 3
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C[C@H](NC(=O)CSc1nc2scc(-c3cccs3)c2c(=O)n1C)c1ccc(F)cc1 ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. C1(CS[C@H](c2ccccc2)N1c1ccccc1F)=O ### Response: O=C1CS[C@H](c2ccccc2)N1c1ccccc1F
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC[C@H](NC(=O)c1ccc(C)cc1F)c1ccc(Cl)cc1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a carboxyl group? O=C(Cc1ccccc1Cl)/N=C1/S[C@H]2CS(=O)(=O)C[C@H]2N1Cc1ccc(F)cc1 ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CS(=O)(=O)[C@H]1CCC[C@H](N2CCC(C#N)CC2)C1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C1CCN(Cc2cc(F)cc(C#CCO)c2)CCN1 ### Response: 3
functional_group
### Instruction: Does the molecule contain a amide group? CCC1(CC)C(=O)NC(=NNC(N)=S)NC1=O ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1ccc(Cl)c(Cl)c1 Fragment 2: [1*]C(=O)C[8*] ### Response: O=C(Cc1ccc(Cl)c(Cl)c1)NC1COC1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(=O)N[C@H]1CCCN(C(=O)N[C@H](CC(C)C)C[NH+](C)C)C1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCOc1ccc(N2C(=O)NC(=O)/C(=C\NCCc3c[nH]c4ccc(O)cc34)C2=O)cc1 ### Response: 2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. O=C(Cc1ccc2ccccc2c1)N(Cc1ccccc1)[C@H]1CCS(=O)(=O)C1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[NH+](C)[C@H]1CC[C@@H](NC(=O)[C@H](Oc2ccc(F)c(F)c2)c2ccccc2)C1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a halide group? Cc1c(Cl)cccc1NC(=O)C(=O)NC[C@H](c1cccn1C)[NH+](C)C ### Response: Yes
ring_counting
### Instruction: Count the five-membered rings in the following molecule. COc1c(N)cc(-c2nc3cc(Cl)ccc3o2)cc1N ### Response: 1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CC[C@H](c1ccccc1)[C@@H]1CCCN1C(=O)C1C[C@@H](C)O[C@@H](C)C1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? NC(=S)c1nccn1-c1nccn(C2CC2)c1=O ### Response: 1
functional_group
### Instruction: Does the molecule contain a ester group? Cc1sc2nc(CN3CCOCC3)nc(Oc3ccc(NC(=O)c4ccco4)cc3)c2c1C ### Response: No
functional_group
### Instruction: Does the molecule contain a ester group? CC1(C)C[C@](C[NH3+])(Nc2cccc(Cl)c2)C(C)(C)O1 ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Fc1ccccc1N1CCN(c2nc3ccccc3[nH]2)CC1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCCn1cc[nH+]c1CN1CCC(C(=O)N2CCCC2)CC1 ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]C/C=C/C Fragment 2: [9*]n1c(C)cn2c3c(=O)n(C)c(=O)n(C)c3nc12 ### Response: C/C=C/Cn1c(C)cn2c3c(=O)n(C)c(=O)n(C)c3nc12
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [3*]OCC Fragment 2: [8*][C@@H](C)C[C@H](C)[NH3+] ### Response: CCOc1cccc([C@@H](C)C[C@H](C)[NH3+])c1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N1CCCC1 Fragment 2: [1*]C(=O)c1cccc(S([12*])(=O)=O)c1 ### Response: O=C(Nc1ccc(F)cc1)c1cccc(S(=O)(=O)N2CCCC2)c1
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? CCc1noc(-c2ccc(C)c(NC(=O)N(C)Cc3nnc(C)n3C)c2)n1 ### Response: Yes
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1cc(NC(=O)C(C)(C)Oc2ccc(Cl)cc2)n(-c2nc([O-])c3cnn(C)c3n2)n1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a ether group? Cc1ccc(S(=O)(=O)Nc2ccc3c(c2)NC(=O)[C@@H](C)O3)cc1F ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [3*]Oc1cccc(F)c1 Fragment 2: [16*]c1cccc(F)c1 ### Response: CC[NH2+][C@@H](C)c1ccc(Oc2cccc(F)c2)c(F)c1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [11*]S[C@H](C)CC Fragment 2: [16*]c1ccccc1 ### Response: CC[C@@H](C)SCC(=O)Cc1nc(-c2ccccc2)cs1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*][NH+]1CCc2cncnc2C1 Fragment 2: [1*]C(=O)[C@H]([4*])C ### Response: C[C@H](C(=O)NCc1ccc2c(c1)OCO2)[NH+]1CCc2cncnc2C1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c(ccc(OCc2c(cc(cc2)Cl)Cl)c1)OC ### Response: COc1ccc(OCc2ccc(Cl)cc2Cl)cc1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]C(C)(C)C Fragment 2: [16*]c1ccccc1F ### Response: CC(C)(C)c1cc(NC(=O)CCC(=O)N2CCN(c3ccccc3F)CC2)n(-c2ccccc2)n1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(=O)c1ccc(NS(=O)(=O)c2c(C)cc(N3CCCCS3(=O)=O)cc2C)cc1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1ccc(NC(=O)c2cc3ccccc3oc2=O)c([N+](=O)[O-])c1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]C[C@H]([4*])c1cccc(F)c1 Fragment 2: [5*]N(C)C ### Response: C[C@@H]1CCC[C@@H]1[NH2+]C[C@@H](c1cccc(F)c1)N(C)C
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(-c2nc(-c3ccnnc3)on2)cnc(cc1)-n1nc(cc1C)C ### Response: Cc1cc(C)n(-c2ccc(-c3noc(-c4ccnnc4)n3)cn2)n1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]C[C@@H]1CSc2ccccc21 Fragment 2: [6*]C(=O)[O-] ### Response: CC[C@@H]1CCC[C@@](C[C@@H]2CSc3ccccc32)(C(=O)[O-])C1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C([O-])[C@H]1CC(=O)N(Cc2ccccc2CN2CCCC2=O)C1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. n1cccc(c1OCC)C(=O)NC[C@@H](c1ccc(cc1)F)N1CCOCC1 ### Response: CCOc1ncccc1C(=O)NC[C@@H](c1ccc(F)cc1)N1CCOCC1
canonicalization
### Instruction: Canonicalize the following SMILES string. [C@@H]1(CCCCC[C@H]1NC(=O)[C@H](C)Oc1ccccc1)C(=O)OC ### Response: COC(=O)[C@H]1CCCCC[C@H]1NC(=O)[C@H](C)Oc1ccccc1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. O=C1NC(=O)c2ccccc2/C1=C\Nc1nc(-c2ccncc2)cs1 ### Response: 3
ring_counting
### Instruction: Count the six-membered rings in the following molecule. N#CCCN(Cc1ccco1)C(=O)[C@@H]1C[C@H]2CC[C@@H]1O2 ### Response: 0
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CNC(=O)[C@H](C)C[NH+](C)Cc1cc(OC)c2c(c1)OCCO2 ### Response: 3
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCN(CC)C(=O)c1cnc(C23CC4CC(CC(C4)C2)C3)[nH]c1=O ### Response: 5
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COC(=O)c1ccc(CNc2ccccc2C(C)C)nc1 ### Response: 3
ring_counting
### Instruction: Count the six-membered rings in the following molecule. COCCOc1ccc2c(c1)[C@H]1C=CC[C@@H]1[C@H](c1cc(Br)ccc1O)N2 ### Response: 3
ring_counting
### Instruction: Count the five-membered rings in the following molecule. COc1cc([C@@H]2C(N)=NC(=O)N2C(C)C)ccc1O ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cccc2c(C(NNC(c3cc(C)oc3C)=O)=O)cccc21 ### Response: Cc1cc(C(=O)NNC(=O)c2cccc3ccccc23)c(C)o1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc(C(=O)O[C@@H](C)[C@H]2CCCO2)cc1F ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)C[4*] Fragment 2: [5*]Nc1ccc(Cl)cc1N[5*] ### Response: O=C(CNc1ccc(Cl)cc1NC(=O)c1ccco1)Nc1ccc(F)c(Cl)c1
functional_group
### Instruction: Does the molecule contain a halide group? CCOc1cc([C@H]2c3sc([S-])nc3SC[C@@H]2C=O)ccc1O ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(=O)Oc1cccc(C(=O)Nc2ccc(-c3nc4ccccc4[nH]3)cc2)c1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCOC(=O)c1sc(NC(=O)CS(=O)(=O)c2ccc(Cl)cc2)nc1C ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? [NH3+]C1C[C@H]2CC[C@@H](C1)N2c1ccc2nccnc2n1 ### Response: 0
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H](NC(=O)/C=C/C1CCCCC1)c1cccc(C#N)c1 ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]Cn1ccc2c(CO)cccc21 Fragment 2: [8*]Cc1ccc(Cl)cc1 ### Response: OCc1cccc2c1ccn2Cc1ccc(Cl)cc1
functional_group
### Instruction: Does the molecule contain a ester group? O=C(c1cc([N+](=O)[O-])ccc1Cl)N1CCN(Cc2ccc3c(c2)OCO3)CC1 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*][NH2+][C@@H](C)C(C)C Fragment 2: [4*][C@@H](C)C(C)C ### Response: CC(C)[C@H](C)[NH2+][C@H](C)C(=O)N1CCN(c2ccccc2)CC1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1ccc2ccccc2c1 Fragment 2: [15*][C@@H]1CCN(S(=O)(=O)N(CC)CC)C[C@H]1O ### Response: CCN(CC)S(=O)(=O)N1CC[C@@H](c2ccc3ccccc3c2)[C@H](O)C1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. C[C@H]1CN(C(=O)[C@@H]2CCS(=O)(=O)C2)C[C@H](C)O1 ### Response: 1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cc1nc(CSCC(=O)N2CCCC[C@H]2c2nc3ccccc3s2)no1 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. c1ccc(-n2nnnc2NC[C@@H]2CCOC2)cc1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CN(CC1CCC1)C(=O)[C@@H]1Cc2[nH+]c[nH]c2CN1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. n1n(CC2CCN(C(=O)c3c(cccc3)F)CC2)c(=O)ccc1-c1ccc(OC)cc1 ### Response: COc1ccc(-c2ccc(=O)n(CC3CCN(C(=O)c4ccccc4F)CC3)n2)cc1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1onc(-c2ccccc2Cl)c1C(=O)N1CCC(Oc2ncccn2)CC1 ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)c1sc(C)nc1C Fragment 2: [5*]N1C[C@@H](C)[C@@H]([15*])C1 ### Response: COC(=O)[C@H]1CN(C(=O)c2sc(C)nc2C)C[C@H]1C
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1nn(-c2ccc(NC(=O)[C@@H]3CC(=O)N(C(C)C)C3)cn2)c(C)c1Cl ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c2nc(n(c2cc(c1)C(F)(F)F)CCC)SCC(NC(=O)NC(C)(C)C)=O ### Response: CCCn1c(SCC(=O)NC(=O)NC(C)(C)C)nc2ccc(C(F)(F)F)cc21
functional_group
### Instruction: Does the molecule contain a amine group? Cc1ccccc1C1=C[C@H]([C@H]2NC(c3cccc(F)c3)=NO2)N=N1 ### Response: Yes
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CC(=O)Nc1ccc(C(=O)N[C@@H](C)[C@H](C)N2CCOCC2)cc1 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. C(F)(F)Oc1c(NC(C(=O)N2CC[C@@H]([NH+]3CCCC3)C2)=O)cccc1 ### Response: O=C(Nc1ccccc1OC(F)F)C(=O)N1CC[C@@H]([NH+]2CCCC2)C1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H](NC(=O)c1ccc2c(c1)NC(=O)CO2)c1ccccc1F ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. C(NC(C[C@H]1C(N(Cc2ccccc2)[C@H](C)c2n1c1c(cccc1)n2)=O)=O)c1ccccc1OC ### Response: COc1ccccc1CNC(=O)C[C@H]1C(=O)N(Cc2ccccc2)[C@H](C)c2nc3ccccc3n21
canonicalization
### Instruction: Canonicalize the following SMILES string. C1[C@@H](CCS1(=O)=O)CNC(CCOc1c(C)cccc1C)=O ### Response: Cc1cccc(C)c1OCCC(=O)NC[C@@H]1CCS(=O)(=O)C1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC/[NH+]=C(\NCc1ccc(Cl)nc1)NC[C@@H]1Cc2ccccc2O1 ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. FC(F)(Oc1ccc(NC(=O)c2cc(n(c(=O)n2)-c2ccccc2)[O-])cc1)F ### Response: O=C(Nc1ccc(OC(F)(F)F)cc1)c1cc([O-])n(-c2ccccc2)c(=O)n1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1[nH]nc2cc([N-]S(=O)(=O)c3ccc4ccccc4c3)ccc12 ### Response: 1
functional_group
### Instruction: Does the molecule contain a nitrile group? COc1ccc(NC(=O)Cn2cnc3c([nH]c4ccc(C)cc43)c2=O)c(C)c1 ### Response: No
functional_group
### Instruction: Does the molecule contain a carboxyl group? Cc1nc2ccc(C(=O)N3CCC(=O)N(CC4CC4)[C@@H](C(C)C)C3)cc2nc1C ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)[C@H]1CC=CCC1 Fragment 2: [5*]N1Cc2ccccc2N(C)C[C@H]1CC ### Response: CC[C@@H]1CN(C)c2ccccc2CN1C(=O)[C@H]1CC=CCC1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)C[8*] Fragment 2: [14*]c1nn2c([14*])nnc2s1 ### Response: C[NH+]1CCN(C(=O)Cc2cccc(-c3nn4c(CC(=O)N5CC[NH+](C)CC5)nnc4s3)c2)CC1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCCN1C(=O)c2ccc(C(=O)Nc3ccc(OCC(=O)[O-])cc3C)cc2C1=O ### Response: 3
ring_counting
### Instruction: Count the five-membered rings in the following molecule. N#CCSC1[NH+]=c2ccccc2=[NH+]1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc(N2CCN(S(=O)(=O)c3c(C)noc3C)CC2)cc1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. CCN(C(=O)CCCC(NN1CCCCC1)=O)CC ### Response: CCN(CC)C(=O)CCCC(=O)NN1CCCCC1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(c(C)cccc1)NC(=O)[C@H](C)Sc1nnc(n1C)-c1c(OC)cccc1 ### Response: COc1ccccc1-c1nnc(S[C@@H](C)C(=O)Nc2ccccc2C)n1C
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cc1ccccc1[S@@](=O)CCC(=O)NCc1ccc(F)cc1 ### Response: 0
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccccc1O[C@@H](C)CNC(=O)CC(C)C ### Response: 4
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N1CC[C@H](C(N)=O)c2ccccc21 Fragment 2: [1*]C(=O)c1cccc(Cl)c1 ### Response: NC(=O)[C@H]1CCN(C(=O)c2cccc(Cl)c2)c2ccccc21
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N(C)C[8*] Fragment 2: [9*]n1cncn1 ### Response: CN(Cc1ccccn1)C(=O)Nc1cccnc1-n1cncn1
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? Cc1nnc2n1CCC[C@H]2NC(=O)NCc1ccccc1C[NH+](C)C ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. Cc1c(SC)ccc(CNC(N2[C@@H](CCC2)c2n(cnn2)C)=O)c1 ### Response: CSc1ccc(CNC(=O)N2CCC[C@H]2c2nncn2C)cc1C
canonicalization
### Instruction: Canonicalize the following SMILES string. C1(C)CCN(CC1)c1nn2c(s1)ncc(c2=O)C(NCc1cc(C)ccc1)=O ### Response: Cc1cccc(CNC(=O)c2cnc3sc(N4CCC(C)CC4)nn3c2=O)c1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [14*]c1cc([16*])c(C#N)c(N)n1 Fragment 2: [9*]n1cccc1[14*] ### Response: N#Cc1c(-c2cccn2-c2nccs2)cc(-c2ccccn2)nc1N